Ss1.1-Thy1-THY010030F06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTATTTCCGCCTACTCTGTGGGGCAACAGGCTAATTGGGCAGAGCCGCGGCCGCAGTC GGAGCAGACGGGTTCCCCACACCTGAAGCCGGCGCGATGTGGCTGTCGCTGCTGCTGCTG GCTGCGCTGCTGCTGGCCGTCCTCGGCCAAGTTTACAAGTGGCTGTTTGCAGGCAGCTCT CCGAACCCCTTCTCCGAGGACGTTAAGAGGCCACCCGCACCCCTCGTGACGGACAAGGAA GCCAGGAAGAAGGTTCTCAAACAAGTTTTCTCAGTCAACCGAGTGCCAGAGAAGCTGGAT GTGGTGGTGATTGGCAGTGGCTTTGGGGGCCTGGCTGCAGCTGCGATCCTGGCCAAAGCC GGCAAGCGTGTTCTGGTGCTGGAACAACATACCAAGGCGGGAGGCTGTTGCCATACCTTT GGAAAGGATGGCCTTGAATTTGACACGGGAATCCATTATATCGGGCGCATGGAGGAGGGC AGCTTTGGCCGATTTATCTTGGACCAGATCACCGAGGGGCAACTGGACTGGGCCACCTTG TCTTCTCCCTTTGACATCATGGTCCTCGATGGGCCCAATGGCCGAAAGGAGTTTCCCATG TACACTGGGAAGACGGCCTATGTTCAGGGCCTCAAGGAGAAATTTCCCCAGGAAGAAGCT GCCATCGACAAGTACATAAAGCTGGTTAAGATGGTGTCCAGCCGCGCCTCTCATGCCATC TTGCTGAAGATCCTCCCACTGCCCTTGGCTCAGTTCCTCAGCAAGTACGGGCTGCTCACT CGTTTCTCGCCGTTCCTCCGCGCATCCACCCAGAGCCTGGCCAAGGTCCTGCAGCAGCTG CCAGCCTCCCCGGAGCTCCGGGCTGTGCTCAGCTACATTTTCCCCACTTATGGTGTGACC CCCAGCCACAGCACCTTTGCCATGCACGCTCTCCTGGTTGACCACTACTTGAAAGGGGCC TTTTATCCGAAAGGGGGTACCAGTGAAATTGCCTTCCACACCATCCCTGTGATTCAGCGG GCCGGGGGCGCCGTCCTGACAAGGGCCCCTGTGCAGAGCATCTTGCTGGACTCAGCTGGG AAAGCCTGTGGTGTCGCCGTGAAGAATGGGCAAGAACTGGTGAACATCTTCTGCCCCGTT GTGATCTCTGATGCAGGACTCTTCAACACCTATGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTATTTCCGCCTACTCTGTGGGGCAACAGGCTAATTGGGCAGAGCCGCGGCCGCAGTC GGAGCAGACGGGTTCCCCACACCTGAAGCCGGCGCGATGTGGCTGTCGCTGCTGCTGCTG GCTGCGCTGCTGCTGGCCGTCCTCGGCCAAGTTTACAAGTGGCTGTTTGCAGGCAGCTCT CCGAACCCCTTCTCCGAGGACGTTAAGAGGCCACCCGCACCCCTCGTGACGGACAAGGAA GCCAGGAAGAAGGTTCTCAAACAAGTTTTCTCAGTCAACCGAGTGCCAGAGAAGCTGGAT GTGGTGGTGATTGGCAGTGGCTTTGGGGGCCTGGCTGCAGCTGCGATCCTGGCCAAAGCC GGCAAGCGTGTTCTGGTGCTGGAACAACATACCAAGGCGGGAGGCTGTTGCCATACCTTT GGAAAGGATGGCCTTGAATTTGACACGGGAATCCATTATATCGGGCGCATGGAGGAGGGC AGCTTTGGCCGATTTATCTTGGACCAGATCACCGAGGGGCAACTGGACTGGGCCACCTTG TCTTCTCCCTTTGACATCATGGTCCTCGATGGGCCCAATGGCCGAAAGGAGTTTCCCATG TACACTGGGAAGACGGCCTATGTTCAGGGCCTCAAGGAGAAATTTCCCCAGGAAGAAGCT GCCATCGACAAGTACATAAAGCTGGTTAAGATGGTGTCCAGCCGCGCCTCTCATGCCATC TTGCTGAAGATCCTCCCACTGCCCTTGGCTCAGTTCCTCAGCAAGTACGGGCTGCTCACT CGTTTCTCGCCGTTCCTCCGCGCATCCACCCAGAGCCTGGCCAAGGTCCTGCAGCAGCTG CCAGCCTCCCCGGAGCTCCGGGCTGTGCTCAGCTACATTTTCCCCACTTATGGTGTGACC CCCAGCCACAGCACCTTTGCCATGCACGCTCTCCTGGTTGACCACTACTTGAAAGGGGCC TTTTATCCGAAAGGGGGTACCAGTGAAATTGCCTTCCACACCATCCCTGTGATTCAGCGG GCCGGGGGCGCCGTCCTGACAAGGGCCCCTGTGCAGAGCATCTTGCTGGACTCAGCTGGG AAAGCCTGTGGTGTCGCCGTGAAGAATGGGCAAGAACTGGTGAACATCTTCTGCCCCGTT GTGATCTCTGATGCAGGACTCTTCAACACCTATGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 42-265, gnl|bosTau2|chr11 (34767196-34767418) | |
| 42-265, gnl|Hg17|chr2 (85493342-85493117) | |
| 42-265, gnl|Mm7|chr6 (72616505-72616727) | |
| 445-690, gnl|bosTau2|chr11 (34770147-34770392) | |
| 445-690, gnl|canFam2|chr17 (42734983-42734729) | |
| 445-690, gnl|danRer3|chrNA (59102851-59102603) | |
| 445-690, gnl|dasNov1|scaffold_184821 (791-533) | |
| 445-690, gnl|echTel1|scaffold_113761 (642-389) | |
| 445-690, gnl|fr1|chrUn (17537459-17537705) | |
| 445-690, gnl|hg17|chr2 (85489552-85489806) | |
| 445-690, gnl|Hg17|chr2 (85489806-85489561) | |
| 445-690, gnl|loxAfr1|scaffold_3548 (58124-58378) | |
| 445-690, gnl|mm7|chr6 (72619659-72619405) | |
| 445-690, gnl|Mm7|chr6 (72619403-72619648) | |
| 445-690, gnl|monDom2|scaffold_68 (9198301-9198555) | |
| 445-690, gnl|panTro1|chr12 (88354116-88354370) | |
| 445-690, gnl|rheMac2|chr13 (85914072-85914326) | |
| 445-690, gnl|rn3|chr4 (106347761-106347507) | |
| 445-690, gnl|tetNig1|chr3 (13231667-13231421) | |
| 445-690, gnl|xenTro1|scaffold_763 (584092-583844) | |
| 892-1093, gnl|bosTau2|chr11 (34772480-34772681) | |
| 892-1093, gnl|Hg17|chr2 (85488363-85488162) | |
| 892-1093, gnl|Mm7|chr6 (72621584-72621785) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 42-265, gnl|bosTau2|chr11 (34767196-34767418) | |
| 42-265, gnl|Hg17|chr2 (85493342-85493117) | |
| 42-265, gnl|Mm7|chr6 (72616505-72616727) | |
| 445-690, gnl|bosTau2|chr11 (34770147-34770392) | |
| 445-690, gnl|canFam2|chr17 (42734983-42734729) | |
| 445-690, gnl|danRer3|chrNA (59102851-59102603) | |
| 445-690, gnl|dasNov1|scaffold_184821 (791-533) | |
| 445-690, gnl|echTel1|scaffold_113761 (642-389) | |
| 445-690, gnl|fr1|chrUn (17537459-17537705) | |
| 445-690, gnl|hg17|chr2 (85489552-85489806) | |
| 445-690, gnl|Hg17|chr2 (85489806-85489561) | |
| 445-690, gnl|loxAfr1|scaffold_3548 (58124-58378) | |
| 445-690, gnl|mm7|chr6 (72619659-72619405) | |
| 445-690, gnl|Mm7|chr6 (72619403-72619648) | |
| 445-690, gnl|monDom2|scaffold_68 (9198301-9198555) | |
| 445-690, gnl|panTro1|chr12 (88354116-88354370) | |
| 445-690, gnl|rheMac2|chr13 (85914072-85914326) | |
| 445-690, gnl|rn3|chr4 (106347761-106347507) | |
| 445-690, gnl|tetNig1|chr3 (13231667-13231421) | |
| 445-690, gnl|xenTro1|scaffold_763 (584092-583844) | |
| 892-1093, gnl|bosTau2|chr11 (34772480-34772681) | |
| 892-1093, gnl|Hg17|chr2 (85488363-85488162) | |
| 892-1093, gnl|Mm7|chr6 (72621584-72621785) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.120048) | |
| med (0.116252) | |
| cty (0.10408) |