Ss1.1-Thy1-THY010032E10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTTTCAAGTCCTGCTCCTCATGGGAGCCAGAAATCTCTTTCAAGCTTCACATCACAAAG GGCTCCCCAGTGAGCAGTGGGTCTCCGTCCCCCTCTCCAGGGGCCCTTGGATGGGACCTT GTTCTGGAAAGGAGCCATGGACCTCTGGCTTTGGTCACTGTACTTCCTGCCAGTGTCTGG TGCTCTGAGAGTCCTTCCAGAAATAAAGCTGGAAGGAGTGCTGGGAGGATCCATTGTCAT CGAGTGCCCACTTCCTGAAACACCTGTGAGGCTATATCTATGCCGGACAATGGCTTTGTC TGGAACCTGCACCACCGTGGTGTCCAACAAGAATTTTGTCCTGGAGGAATTCAAACACCG AGTCACCCTGGAGCTGTGTCCAGACAGGAAACTGTTCCTGGTGGAGGTGACAGAGCTGAC CGAGAGAGACAGCGGGGTCTACGCCTGTGGGGTGGGCATGAACACAAATCGGGGCAAGAC CCAGCAGGTCACTCTGACTGTTCACAGCGATTACAGGCCATTCTGGGAAGAAGATCCGAT GCCGGAGCCTCCAGCATGGTTTAATAGGTTTCTCCAAATGCATATGCCTCCTCCTTGGTT CAAGACGCCTGCATATGCCAGCCCTTTCGAATTCATATCCAAAGAAACCTCACCATCTCA AAGGACCAAGGCCCCTCCAGCACACCACACCTCCCCCACCACCTCAGTCACCCACCACCC TCGAGTTTCCAAGGCATCTTCGGTAGCAACGGCTGAGCCCACAACCCTCCTGCCACCCAC CACAGCCTTAAAAACCTCAGCCCGGGAAACATTGCTCAGGCCCCAGACGGCCAGCTACAA CCATCAAACCCGGCTTCACAGGCAGAGAGCCTTCAACCAACGCCTAGGTCCGGTGTCCAG GATGCGAGAGCAAGGATTCCACGTCCTGATCCCTGCCGCCCTGGGTTTCATCCTGCTGGC ACTTCTGGTGCTGCTGGCGAGAAGGGTCTTTCAAAGGAGGAAAGCTCTCTCCAGGCGGGT CCGCCGACTGGCAGTGAGGATGCGCGCCCTGGAAGCCTCCCAGCGGCCACGCATATTGCA GAGAGCGCGCACCCAAAATAATGTCTACAGTGCCTGCCCTCGGCGCCCTCGGGGGGCGGA CGCTGCTGGTGGTCAGCAGGCAGGTCAAGGGGCGGCACCTCCACTAGGCTCCGCAGCGCT GGCGACCTCGCCCCCTCCGCAGGTGACTGAAACTCCCTGGCTCCATGCCCCGTCTCTGAG GATCGGCTGTGAATATGTGAGATTTTACCACCAGCCTGCTGCCGAGATGGGGGACACCAA TTCTGATGACTATGTCAATGTTCCCTGCCGGACCCTCCGCTCCAACTGTCCCCCTGGGCC CAGACCTTGGTGCCAATGAGTCTTGTCTGTCTGCTGGTTTCCAGCACCTGCTCCATCTGT TTTCCCAGCCCTCACTACCTCCCACATTCCACCTCAAGTTTCCATCTGTTTGCCTTGAGG CATAGCTCAGTCCCCCCTCCCCCAGATCTTCTTGCACATCTTGGCAGCCCCCTGTGGGTT TCAGGCGGGCTCTGGGAGCACAGAGCACATGTCCTGATGCCTCCTGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTTTCAAGTCCTGCTCCTCATGGGAGCCAGAAATCTCTTTCAAGCTTCACATCACAAAG GGCTCCCCAGTGAGCAGTGGGTCTCCGTCCCCCTCTCCAGGGGCCCTTGGATGGGACCTT GTTCTGGAAAGGAGCCATGGACCTCTGGCTTTGGTCACTGTACTTCCTGCCAGTGTCTGG TGCTCTGAGAGTCCTTCCAGAAATAAAGCTGGAAGGAGTGCTGGGAGGATCCATTGTCAT CGAGTGCCCACTTCCTGAAACACCTGTGAGGCTATATCTATGCCGGACAATGGCTTTGTC TGGAACCTGCACCACCGTGGTGTCCAACAAGAATTTTGTCCTGGAGGAATTCAAACACCG AGTCACCCTGGAGCTGTGTCCAGACAGGAAACTGTTCCTGGTGGAGGTGACAGAGCTGAC CGAGAGAGACAGCGGGGTCTACGCCTGTGGGGTGGGCATGAACACAAATCGGGGCAAGAC CCAGCAGGTCACTCTGACTGTTCACAGCGATTACAGGCCATTCTGGGAAGAAGATCCGAT GCCGGAGCCTCCAGCATGGTTTAATAGGTTTCTCCAAATGCATATGCCTCCTCCTTGGTT CAAGACGCCTGCATATGCCAGCCCTTTCGAATTCATATCCAAAGAAACCTCACCATCTCA AAGGACCAAGGCCCCTCCAGCACACCACACCTCCCCCACCACCTCAGTCACCCACCACCC TCGAGTTTCCAAGGCATCTTCGGTAGCAACGGCTGAGCCCACAACCCTCCTGCCACCCAC CACAGCCTTAAAAACCTCAGCCCGGGAAACATTGCTCAGGCCCCAGACGGCCAGCTACAA CCATCAAACCCGGCTTCACAGGCAGAGAGCCTTCAACCAACGCCTAGGTCCGGTGTCCAG GATGCGAGAGCAAGGATTCCACGTCCTGATCCCTGCCGCCCTGGGTTTCATCCTGCTGGC ACTTCTGGTGCTGCTGGCGAGAAGGGTCTTTCAAAGGAGGAAAGCTCTCTCCAGGCGGGT CCGCCGACTGGCAGTGAGGATGCGCGCCCTGGAAGCCTCCCAGCGGCCACGCATATTGCA GAGAGCGCGCACCCAAAATAATGTCTACAGTGCCTGCCCTCGGCGCCCTCGGGGGGCGGA CGCTGCTGGTGGTCAGCAGGCAGGTCAAGGGGCGGCACCTCCACTAGGCTCCGCAGCGCT GGCGACCTCGCCCCCTCCGCAGGTGACTGAAACTCCCTGGCTCCATGCCCCGTCTCTGAG GATCGGCTGTGAATATGTGAGATTTTACCACCAGCCTGCTGCCGAGATGGGGGACACCAA TTCTGATGACTATGTCAATGTTCCCTGCCGGACCCTCCGCTCCAACTGTCCCCCTGGGCC CAGACCTTGGTGCCAATGAGTCTTGTCTGTCTGCTGGTTTCCAGCACCTGCTCCATCTGT TTTCCCAGCCCTCACTACCTCCCACATTCCACCTCAAGTTTCCATCTGTTTGCCTTGAGG CATAGCTCAGTCCCCCCTCCCCCAGATCTTCTTGCACATCTTGGCAGCCCCCTGTGGGTT TCAGGCGGGCTCTGGGAGCACAGAGCACATGTCCTGATGCCTCCTGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 163-509, gnl|bosTau2|chr16 (3985638-3985983) | |
| 163-509, gnl|canFam2|chr7 (9011355-9011857) | |
| 163-509, gnl|dasNov1|scaffold_18752 (8236-8767) | |
| 163-509, gnl|echTel1|scaffold_303432 (2022-2555) | |
| 163-509, gnl|hg17|chr1 (203475316-203475836) | |
| 163-509, gnl|Hg17|chr1 (203475844-203475499) | |
| 163-509, gnl|loxAfr1|scaffold_31924 (8440-7942) | |
| 163-509, gnl|mm7|chr1 (130778772-130778303) | |
| 163-509, gnl|Mm7|chr1 (130778293-130778635) | |
| 163-509, gnl|monDom2|scaffold_13 (9160297-9160880) | |
| 163-509, gnl|oryCun1|scaffold_210184 (201257-201762) | |
| 163-509, gnl|panTro1|chr1 (187056910-187057430) | |
| 163-509, gnl|rheMac2|chr1 (163443449-163442938) | |
| 163-509, gnl|rn3|chr13 (43837743-43837274) | |
| 643-867, gnl|bosTau2|chr16 (3987864-3988088) | |
| 643-867, gnl|canFam2|chr7 (9009473-9009729) | |
| 643-867, gnl|dasNov1|scaffold_18752 (6390-6630) | |
| 643-867, gnl|echTel1|scaffold_303432 (220-487) | |
| 643-867, gnl|hg17|chr1 (203473466-203473721) | |
| 643-867, gnl|Hg17|chr1 (203473694-203473470) | |
| 643-867, gnl|loxAfr1|scaffold_31924 (10865-10610) | |
| 643-867, gnl|mm7|chr1 (130780443-130780184) | |
| 643-867, gnl|Mm7|chr1 (130780216-130780437) | |
| 643-867, gnl|monDom2|scaffold_13 (9158097-9158358) | |
| 643-867, gnl|oryCun1|scaffold_185578 (3945-3692) | |
| 643-867, gnl|panTro1|chr1 (187055060-187055315) | |
| 643-867, gnl|rheMac2|chr1 (163445315-163445059) | |
| 643-867, gnl|rn3|chr13 (43839418-43839157) | |
| 1220-1607, gnl|bosTau2|chr16 (3995814-3996195) | |
| 1220-1607, gnl|Hg17|chr1 (203466890-203466503) | |
| 1220-1607, gnl|Mm7|chr1 (130784727-130785121) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 163-509, gnl|bosTau2|chr16 (3985638-3985983) | |
| 163-509, gnl|canFam2|chr7 (9011355-9011857) | |
| 163-509, gnl|dasNov1|scaffold_18752 (8236-8767) | |
| 163-509, gnl|echTel1|scaffold_303432 (2022-2555) | |
| 163-509, gnl|hg17|chr1 (203475316-203475836) | |
| 163-509, gnl|Hg17|chr1 (203475844-203475499) | |
| 163-509, gnl|loxAfr1|scaffold_31924 (8440-7942) | |
| 163-509, gnl|mm7|chr1 (130778772-130778303) | |
| 163-509, gnl|Mm7|chr1 (130778293-130778635) | |
| 163-509, gnl|monDom2|scaffold_13 (9160297-9160880) | |
| 163-509, gnl|oryCun1|scaffold_210184 (201257-201762) | |
| 163-509, gnl|panTro1|chr1 (187056910-187057430) | |
| 163-509, gnl|rheMac2|chr1 (163443449-163442938) | |
| 163-509, gnl|rn3|chr13 (43837743-43837274) | |
| 643-867, gnl|bosTau2|chr16 (3987864-3988088) | |
| 643-867, gnl|canFam2|chr7 (9009473-9009729) | |
| 643-867, gnl|dasNov1|scaffold_18752 (6390-6630) | |
| 643-867, gnl|echTel1|scaffold_303432 (220-487) | |
| 643-867, gnl|hg17|chr1 (203473466-203473721) | |
| 643-867, gnl|Hg17|chr1 (203473694-203473470) | |
| 643-867, gnl|loxAfr1|scaffold_31924 (10865-10610) | |
| 643-867, gnl|mm7|chr1 (130780443-130780184) | |
| 643-867, gnl|Mm7|chr1 (130780216-130780437) | |
| 643-867, gnl|monDom2|scaffold_13 (9158097-9158358) | |
| 643-867, gnl|oryCun1|scaffold_185578 (3945-3692) | |
| 643-867, gnl|panTro1|chr1 (187055060-187055315) | |
| 643-867, gnl|rheMac2|chr1 (163445315-163445059) | |
| 643-867, gnl|rn3|chr13 (43839418-43839157) | |
| 1220-1607, gnl|bosTau2|chr16 (3995814-3996195) | |
| 1220-1607, gnl|Hg17|chr1 (203466890-203466503) | |
| 1220-1607, gnl|Mm7|chr1 (130784727-130785121) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |