Ss1.1-Thy1-THY010032F07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTCCGCGGCGGCAAGATGGCGGCCCAACCGCAGGATCGAGAGGGTGGTGCGCAGCTGGC AGGGCCCGCGGCGGAGGCCGACCCCCTGGGCCGCTTCACGTGTCCCGTGTGCCTAGAGGT GTACGAGAAGCCGGTGCAGGTGCCCTGCGGACACGTCTTTTGCTCTGCATGCCTGCAGGA ATGTCTGAAGCCGAAGAAGCCTGTCTGTGGGGTGTGTCGCAGCACTCTGGCCCCTGGCGT CCGAGCCGTGGAGCTCGAGCGGCAGATTGAGAGCACAGAGACTTCTTGCCATGGCTGCCG TAAAAATTTTTTCCTATCCAAGATCCGGGCACACGTGGCTACCTGTTCCAAATACCAGAA TTACATCATGGAAGGTGTGAAGGCCACCACCAAGGATGCGTCCCTTCAGCCAAGGAATGT CCCAAACCGTTATACTTTTCCTTGTCCTTACTGTCCTGAGAAGAATTTTGATCAAGAAGG GCTTGTGGAACACTGCAAATTAGTCCATAGCACGGACACCAAATCTGTGGTTTGTCCAAT ATGTGCCTCGATGCCGTGGGGAGACCCCAACTACCGGAGCGCCAACTTCATAGAACACAT CCAGCGTCGGCACCAGTTTTCTTACGACACTTTCGTGGATTACGACGTTGACGAAGAGGA CATGATGAACCAAGTGCTGCAACGCTCCCTCCTTGACCAGTGAGCAGGCGCGGGCTCCAG AGCTTCCACTGTGTGTCCGCGTGAAACATGTGACTCTTCCACCTAAAATGTCCCACAGAC CTGGAAGTGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTCCGCGGCGGCAAGATGGCGGCCCAACCGCAGGATCGAGAGGGTGGTGCGCAGCTGGC AGGGCCCGCGGCGGAGGCCGACCCCCTGGGCCGCTTCACGTGTCCCGTGTGCCTAGAGGT GTACGAGAAGCCGGTGCAGGTGCCCTGCGGACACGTCTTTTGCTCTGCATGCCTGCAGGA ATGTCTGAAGCCGAAGAAGCCTGTCTGTGGGGTGTGTCGCAGCACTCTGGCCCCTGGCGT CCGAGCCGTGGAGCTCGAGCGGCAGATTGAGAGCACAGAGACTTCTTGCCATGGCTGCCG TAAAAATTTTTTCCTATCCAAGATCCGGGCACACGTGGCTACCTGTTCCAAATACCAGAA TTACATCATGGAAGGTGTGAAGGCCACCACCAAGGATGCGTCCCTTCAGCCAAGGAATGT CCCAAACCGTTATACTTTTCCTTGTCCTTACTGTCCTGAGAAGAATTTTGATCAAGAAGG GCTTGTGGAACACTGCAAATTAGTCCATAGCACGGACACCAAATCTGTGGTTTGTCCAAT ATGTGCCTCGATGCCGTGGGGAGACCCCAACTACCGGAGCGCCAACTTCATAGAACACAT CCAGCGTCGGCACCAGTTTTCTTACGACACTTTCGTGGATTACGACGTTGACGAAGAGGA CATGATGAACCAAGTGCTGCAACGCTCCCTCCTTGACCAGTGAGCAGGCGCGGGCTCCAG AGCTTCCACTGTGTGTCCGCGTGAAACATGTGACTCTTCCACCTAAAATGTCCCACAGAC CTGGAAGTGAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 3-156, gnl|bosTau2|chr13 (59911435-59911276) | |
| 3-156, gnl|Hg17|chr20 (47986343-47986496) | |
| 3-156, gnl|Mm7|chr2 (167244099-167244255) | |
| 157-307, gnl|bosTau2|chr13 (59907314-59907164) | |
| 157-307, gnl|Hg17|chr20 (47991505-47991655) | |
| 157-307, gnl|Mm7|chr2 (167247701-167247851) | |
| 403-531, gnl|bosTau2|chr13 (59904974-59904844) | |
| 403-531, gnl|canFam2|chr24 (39448226-39448362) | |
| 403-531, gnl|danRer3|chrUn (48008616-48008492) | |
| 403-531, gnl|dasNov1|scaffold_15017 (13615-13751) | |
| 403-531, gnl|echTel1|scaffold_287843 (12435-12571) | |
| 403-531, gnl|fr1|chrUn (172831317-172831439) | |
| 403-531, gnl|hg17|chr20 (47996064-47996200) | |
| 403-531, gnl|Hg17|chr20 (47996065-47996196) | |
| 403-531, gnl|loxAfr1|scaffold_200350 (193-56) | |
| 403-531, gnl|mm7|chr2 (167251850-167251986) | |
| 403-531, gnl|Mm7|chr2 (167251855-167251982) | |
| 403-531, gnl|monDom2|scaffold_1 (161476332-161476463) | |
| 403-531, gnl|oryCun1|scaffold_214711 (58308-58443) | |
| 403-531, gnl|panTro1|chr21_random (14452351-14452225) | |
| 403-531, gnl|rheMac2|chr10 (14536784-14536648) | |
| 403-531, gnl|rn3|chr3 (158564568-158564705) | |
| 403-531, gnl|tetNig1|chr9 (5600069-5599980) | |
| 403-531, gnl|xenTro1|scaffold_165 (881523-881380) | |
| 637-792, gnl|bosTau2|chr13 (59260430-59260583) | |
| 637-792, gnl|Hg17|chr20 (48002019-48002194) | |
| 637-792, gnl|Mm7|chr2 (167255319-167255487) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-156, gnl|bosTau2|chr13 (59911435-59911276) | |
| 3-156, gnl|Hg17|chr20 (47986343-47986496) | |
| 3-156, gnl|Mm7|chr2 (167244099-167244255) | |
| 157-307, gnl|bosTau2|chr13 (59907314-59907164) | |
| 157-307, gnl|Hg17|chr20 (47991505-47991655) | |
| 157-307, gnl|Mm7|chr2 (167247701-167247851) | |
| 403-531, gnl|bosTau2|chr13 (59904974-59904844) | |
| 403-531, gnl|canFam2|chr24 (39448226-39448362) | |
| 403-531, gnl|danRer3|chrUn (48008616-48008492) | |
| 403-531, gnl|dasNov1|scaffold_15017 (13615-13751) | |
| 403-531, gnl|echTel1|scaffold_287843 (12435-12571) | |
| 403-531, gnl|fr1|chrUn (172831317-172831439) | |
| 403-531, gnl|hg17|chr20 (47996064-47996200) | |
| 403-531, gnl|Hg17|chr20 (47996065-47996196) | |
| 403-531, gnl|loxAfr1|scaffold_200350 (193-56) | |
| 403-531, gnl|mm7|chr2 (167251850-167251986) | |
| 403-531, gnl|Mm7|chr2 (167251855-167251982) | |
| 403-531, gnl|monDom2|scaffold_1 (161476332-161476463) | |
| 403-531, gnl|oryCun1|scaffold_214711 (58308-58443) | |
| 403-531, gnl|panTro1|chr21_random (14452351-14452225) | |
| 403-531, gnl|rheMac2|chr10 (14536784-14536648) | |
| 403-531, gnl|rn3|chr3 (158564568-158564705) | |
| 403-531, gnl|tetNig1|chr9 (5600069-5599980) | |
| 403-531, gnl|xenTro1|scaffold_165 (881523-881380) | |
| 637-792, gnl|bosTau2|chr13 (59260430-59260583) | |
| 637-792, gnl|Hg17|chr20 (48002019-48002194) | |
| 637-792, gnl|Mm7|chr2 (167255319-167255487) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cly (0.241284) | |
| cag (0.151194) | |
| pla (0.133672) | |
| pgl (0.118483) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cly (0.241284) | |
| cag (0.151194) | |
| pla (0.133672) | |
| pgl (0.118483) |