Non-Coding RNA Search

Ss1.1-Thy1-THY010034H03.5

Sequence:


               
               TTTTTTCACTGTTGAAATATACTTTTTATTGCATCTCTGCCGTTTTACAAAAATATGACA
AAATAAATTAAAAACAAATAAATAATCACCTATTCTGTGTGTGTTTTCTGTTGGTTTTTT
GGGGTTTCCTTTCGCTTTCCCCCAGCCGGGAGCCTTCTTCCTGGGGGCCGAGAGGGGCTA
CAGTTGGTACAAAGGGCAGCCCAAGACGTGCTTTAAATGTGGTTCCCGGACCCACATGAG
CGGCAGCTGCACACAGGACAGGTGCTTCAGGTGCGGGGAGGAAGGGCACCTGAGCCCTTA
CTGCCGGAAGGGCATCGTCTGCAACCTCTGTGGCAAGCGAGGACACGCCTTTGCCCAGTG
TCCCAAAGCCGTTCACAATTCCGTGGCAGCTCAGCTAACCGGCGTGGCCGGGCACTGAAC
ACCCGCCTGCCTGCCAAGGTGAACACAGAGCCAGCTTACCCCTCTTAAGTGCCAAAACTT
TTTTTAAACCATTTTTTATCGTCTTCGAAGGAGATCTTCTTAAACCTGCAAGAGACGTCT
CGCTCTGCCTTCCTAAACCGAGTTTACTCCATTTCAGCCTTTACTGAATTTGGTGACTGT
TGTCACTAACGATGACCGAGAACTGTAGCGTGCAGATATGTCGCCCCTCCCTTTTTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTCACTGTTGAAATATACTTTTTATTGCATCTCTGCCGTTTTACAAAAATATGACA
AAATAAATTAAAAACAAATAAATAATCACCTATTCTGTGTGTGTTTTCTGTTGGTTTTTT
GGGGTTTCCTTTCGCTTTCCCCCAGCCGGGAGCCTTCTTCCTGGGGGCCGAGAGGGGCTA
CAGTTGGTACAAAGGGCAGCCCAAGACGTGCTTTAAATGTGGTTCCCGGACCCACATGAG
CGGCAGCTGCACACAGGACAGGTGCTTCAGGTGCGGGGAGGAAGGGCACCTGAGCCCTTA
CTGCCGGAAGGGCATCGTCTGCAACCTCTGTGGCAAGCGAGGACACGCCTTTGCCCAGTG
TCCCAAAGCCGTTCACAATTCCGTGGCAGCTCAGCTAACCGGCGTGGCCGGGCACTGAAC
ACCCGCCTGCCTGCCAAGGTGAACACAGAGCCAGCTTACCCCTCTTAAGTGCCAAAACTT
TTTTTAAACCATTTTTTATCGTCTTCGAAGGAGATCTTCTTAAACCTGCAAGAGACGTCT
CGCTCTGCCTTCCTAAACCGAGTTTACTCCATTTCAGCCTTTACTGAATTTGGTGACTGT
TGTCACTAACGATGACCGAGAACTGTAGCGTGCAGATATGTCGCCCCTCCCTTTTTTAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               145-660, gnl|bosTau2|chr13 (41986610-41986092)
               

               
               145-660, gnl|Hg17|chr20 (227169-227686)
               

               
               145-660, gnl|Mm7|chr2 (152154705-152154186)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               145-660, gnl|bosTau2|chr13 (41986610-41986092)
               

               
               145-660, gnl|Hg17|chr20 (227169-227686)
               

               
               145-660, gnl|Mm7|chr2 (152154705-152154186)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fli (0.202881)
               

               
               cje (0.165235)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               cje (0.165235)

	145-660, gnl\|bosTau2\|chr13 (41986610-41986092)
	145-660, gnl\|Hg17\|chr20 (227169-227686)
	145-660, gnl\|Mm7\|chr2 (152154705-152154186)