Ss1.1-Thy1-THY010035G10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTGTGGGAGGGCGGCTTTCACCCAGGCTGCAAGTTCTGTGACCTGGGTCTGTCTACTGG ATGAACTCTGCTGGAAGATGGAACATAGCAGGTTTCTGTCTGGCCTGATACTGGCTGCGT TTCTCTCCCGAGTGAGCCCCTATGAGGTAGAAATGGAGGAACTTGAGGACAAAGTGTTTG TGAGTTGCAATACCAGCATCATATGGCTACAAGGAACAGAAGGAGAACTACTTTCAGATA AAAAAATAGACCTGGGAAAACGCATCCTGGATCCAAGAGGATTATATAAGTGCAATGCGC CAAAAGAACAAGACAGCAACAGCAAAATATTTCTGCAAGTATATTATCGAATGTGCCAGA ACTGCGTGGAGCTGGACTCAGCTACCCTGGCAGGCATCATTGTCACCGACATCATCGCCA CTCTGCTCCTCGCTTTGGGAGTCTACTGCTTTGCTGGACACGAGATGGGAAGGTTCTCTA GGGCTGCTGACACTCAAGATTTGTTGAGGAATGACCAGCTCTATCAGCCCCTTCGAGATC GGAATGATGGTCAGTACAGTCGTCTTGGTGAGAACTGGGCTCGGAACAAGTAAACCTGTG ACTGGTGGCTTCTAGGTGCATCTGTTACCGACTCAACTTCTCTCCTTGCTCAGCTGAGAA AGATGTCCTCCTTCAGTTGGCAGGTGCCTGGATTTTGAAGGATCCTGGGTGAGGCATGGG AGTGGTCCTGACTTGGCTGAGCCTTTGCCCTCCCTGCCCACCTGTGTCCTTCTTTCTTCG CTTCCCTTTCTCTGCCCCACATGGACGGTATGATGGGCAGTGTCTCACCATATCCTGTCC CACTGGTGTTTTTTGGCCTGGCGGACTCTCTGGGTGCAGGATTGCTGCTCCCCACCCCCA CTGGCTCTAGTCCCCGATACCAACACTGCTGCTGCTTTGACTTCCGCACCACAGCTGAGG GCGGGCGGGCTGCTGTGTTTAGAGACCTGGCCACACAGAAGTTTCCATGACATCATGAGC GGAGGTGGCAGAGACATCAAGGGCCCCAAGAATCACTTCTTATCAAGGCTCTGAGAGAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTGTGGGAGGGCGGCTTTCACCCAGGCTGCAAGTTCTGTGACCTGGGTCTGTCTACTGG ATGAACTCTGCTGGAAGATGGAACATAGCAGGTTTCTGTCTGGCCTGATACTGGCTGCGT TTCTCTCCCGAGTGAGCCCCTATGAGGTAGAAATGGAGGAACTTGAGGACAAAGTGTTTG TGAGTTGCAATACCAGCATCATATGGCTACAAGGAACAGAAGGAGAACTACTTTCAGATA AAAAAATAGACCTGGGAAAACGCATCCTGGATCCAAGAGGATTATATAAGTGCAATGCGC CAAAAGAACAAGACAGCAACAGCAAAATATTTCTGCAAGTATATTATCGAATGTGCCAGA ACTGCGTGGAGCTGGACTCAGCTACCCTGGCAGGCATCATTGTCACCGACATCATCGCCA CTCTGCTCCTCGCTTTGGGAGTCTACTGCTTTGCTGGACACGAGATGGGAAGGTTCTCTA GGGCTGCTGACACTCAAGATTTGTTGAGGAATGACCAGCTCTATCAGCCCCTTCGAGATC GGAATGATGGTCAGTACAGTCGTCTTGGTGAGAACTGGGCTCGGAACAAGTAAACCTGTG ACTGGTGGCTTCTAGGTGCATCTGTTACCGACTCAACTTCTCTCCTTGCTCAGCTGAGAA AGATGTCCTCCTTCAGTTGGCAGGTGCCTGGATTTTGAAGGATCCTGGGTGAGGCATGGG AGTGGTCCTGACTTGGCTGAGCCTTTGCCCTCCCTGCCCACCTGTGTCCTTCTTTCTTCG CTTCCCTTTCTCTGCCCCACATGGACGGTATGATGGGCAGTGTCTCACCATATCCTGTCC CACTGGTGTTTTTTGGCCTGGCGGACTCTCTGGGTGCAGGATTGCTGCTCCCCACCCCCA CTGGCTCTAGTCCCCGATACCAACACTGCTGCTGCTTTGACTTCCGCACCACAGCTGAGG GCGGGCGGGCTGCTGTGTTTAGAGACCTGGCCACACAGAAGTTTCCATGACATCATGAGC GGAGGTGGCAGAGACATCAAGGGCCCCAAGAATCACTTCTTATCAAGGCTCTGAGAGAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 1-132, gnl|bosTau2|chr15 (15186062-15186191) | |
| 1-132, gnl|canFam2|chr5 (18399259-18398903) | |
| 1-132, gnl|dasNov1|scaffold_13031 (3927-4248) | |
| 1-132, gnl|echTel1|scaffold_220531 (2793-3138) | |
| 1-132, gnl|hg17|chr11 (117718461-117718791) | |
| 1-132, gnl|Hg17|chr11 (117718609-117718478) | |
| 1-132, gnl|loxAfr1|scaffold_17764 (11864-11524) | |
| 1-132, gnl|mm7|chr9 (44916308-44915954) | |
| 1-132, gnl|Mm7|chr9 (44916154-44916285) | |
| 1-132, gnl|monDom2|scaffold_2 (120356941-120356610) | |
| 1-132, gnl|oryCun1|scaffold_174783 (10630-10309) | |
| 1-132, gnl|panTro1|chr9 (119726080-119726410) | |
| 1-132, gnl|rheMac2|chr14 (116723189-116723520) | |
| 1-132, gnl|rn3|chr8 (47941055-47940702) | |
| 148-292, gnl|bosTau2|chr15 (15187951-15188101) | |
| 148-292, gnl|canFam2|chr5 (18401496-18401213) | |
| 148-292, gnl|dasNov1|scaffold_13031 (2079-2347) | |
| 148-292, gnl|echTel1|scaffold_220531 (1020-1285) | |
| 148-292, gnl|hg17|chr11 (117716288-117716544) | |
| 148-292, gnl|Hg17|chr11 (117716503-117716356) | |
| 148-292, gnl|loxAfr1|scaffold_17764 (15284-15019) | |
| 148-292, gnl|mm7|chr9 (44919546-44919293) | |
| 148-292, gnl|Mm7|chr9 (44919330-44919477) | |
| 148-292, gnl|monDom2|scaffold_2 (120367376-120367116) | |
| 148-292, gnl|oryCun1|scaffold_174783 (12317-12065) | |
| 148-292, gnl|panTro1|chr9 (119723918-119724174) | |
| 148-292, gnl|rheMac2|chr14 (116721011-116721267) | |
| 148-292, gnl|rn3|chr8 (47944219-47943966) | |
| 352-483, gnl|bosTau2|chr15 (15188566-15188697) | |
| 352-483, gnl|canFam2|chr5 (18402213-18402057) | |
| 352-483, gnl|dasNov1|scaffold_13031 (10805-10649) | |
| 352-483, gnl|echTel1|scaffold_220531 (444-594) | |
| 352-483, gnl|hg17|chr11 (117715695-117715851) | |
| 352-483, gnl|Hg17|chr11 (117715831-117715700) | |
| 352-483, gnl|loxAfr1|scaffold_14592 (50562-50408) | |
| 352-483, gnl|mm7|chr9 (44920087-44919941) | |
| 352-483, gnl|Mm7|chr9 (44919949-44920080) | |
| 352-483, gnl|monDom2|scaffold_2 (120368293-120368143) | |
| 352-483, gnl|oryCun1|scaffold_174783 (12871-12715) | |
| 352-483, gnl|panTro1|chr9 (119723325-119723481) | |
| 352-483, gnl|rheMac2|chr14 (116720416-116720572) | |
| 352-483, gnl|rn3|chr8 (47944755-47944609) | |
| 520-1076, gnl|bosTau2|chr15 (15189249-15189807) | |
| 520-1076, gnl|Hg17|chr11 (117715160-117714599) | |
| 520-1076, gnl|Mm7|chr9 (44920610-44921123) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-132, gnl|bosTau2|chr15 (15186062-15186191) | |
| 1-132, gnl|canFam2|chr5 (18399259-18398903) | |
| 1-132, gnl|dasNov1|scaffold_13031 (3927-4248) | |
| 1-132, gnl|echTel1|scaffold_220531 (2793-3138) | |
| 1-132, gnl|hg17|chr11 (117718461-117718791) | |
| 1-132, gnl|Hg17|chr11 (117718609-117718478) | |
| 1-132, gnl|loxAfr1|scaffold_17764 (11864-11524) | |
| 1-132, gnl|mm7|chr9 (44916308-44915954) | |
| 1-132, gnl|Mm7|chr9 (44916154-44916285) | |
| 1-132, gnl|monDom2|scaffold_2 (120356941-120356610) | |
| 1-132, gnl|oryCun1|scaffold_174783 (10630-10309) | |
| 1-132, gnl|panTro1|chr9 (119726080-119726410) | |
| 1-132, gnl|rheMac2|chr14 (116723189-116723520) | |
| 1-132, gnl|rn3|chr8 (47941055-47940702) | |
| 148-292, gnl|bosTau2|chr15 (15187951-15188101) | |
| 148-292, gnl|canFam2|chr5 (18401496-18401213) | |
| 148-292, gnl|dasNov1|scaffold_13031 (2079-2347) | |
| 148-292, gnl|echTel1|scaffold_220531 (1020-1285) | |
| 148-292, gnl|hg17|chr11 (117716288-117716544) | |
| 148-292, gnl|Hg17|chr11 (117716503-117716356) | |
| 148-292, gnl|loxAfr1|scaffold_17764 (15284-15019) | |
| 148-292, gnl|mm7|chr9 (44919546-44919293) | |
| 148-292, gnl|Mm7|chr9 (44919330-44919477) | |
| 148-292, gnl|monDom2|scaffold_2 (120367376-120367116) | |
| 148-292, gnl|oryCun1|scaffold_174783 (12317-12065) | |
| 148-292, gnl|panTro1|chr9 (119723918-119724174) | |
| 148-292, gnl|rheMac2|chr14 (116721011-116721267) | |
| 148-292, gnl|rn3|chr8 (47944219-47943966) | |
| 352-483, gnl|bosTau2|chr15 (15188566-15188697) | |
| 352-483, gnl|canFam2|chr5 (18402213-18402057) | |
| 352-483, gnl|dasNov1|scaffold_13031 (10805-10649) | |
| 352-483, gnl|echTel1|scaffold_220531 (444-594) | |
| 352-483, gnl|hg17|chr11 (117715695-117715851) | |
| 352-483, gnl|Hg17|chr11 (117715831-117715700) | |
| 352-483, gnl|loxAfr1|scaffold_14592 (50562-50408) | |
| 352-483, gnl|mm7|chr9 (44920087-44919941) | |
| 352-483, gnl|Mm7|chr9 (44919949-44920080) | |
| 352-483, gnl|monDom2|scaffold_2 (120368293-120368143) | |
| 352-483, gnl|oryCun1|scaffold_174783 (12871-12715) | |
| 352-483, gnl|panTro1|chr9 (119723325-119723481) | |
| 352-483, gnl|rheMac2|chr14 (116720416-116720572) | |
| 352-483, gnl|rn3|chr8 (47944755-47944609) | |
| 520-1076, gnl|bosTau2|chr15 (15189249-15189807) | |
| 520-1076, gnl|Hg17|chr11 (117715160-117714599) | |
| 520-1076, gnl|Mm7|chr9 (44920610-44921123) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| fty (0.351679) | |
| med (0.348756) | |
| cje (0.165235) | |
| spl (0.143184) | |
| jej (0.0989218) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.351679) | |
| med (0.348756) | |
| cje (0.165235) | |
| spl (0.143184) | |
| jej (0.0989218) |