Non-Coding RNA Search

Ss1.1-Thy1-THY010036C12.5

Sequence:


               
               AAACCTATATCAGGAAGCCTTTTTTTTTTTTTTTTTTAATTTCAGGAACTCTAAGAAACC
ATTATTTCAGGTTATGAAAGTATAACCAAGCATCCTTTTGGGCAGTTCTTTACCAAATGC
AGAAATCTTTCTTCTGGGCGCTCTTCTGTTCCACACGCCCTTTCCTTCTTGCCACTTACC
TTTGCAAAGTGCAAAGAAAAGGGGAGGAAGTACGAGATAAAGCTGAGATGTCCCTGTCCT
GCCTGCTTGTCCCCAAGACCCGGGGGCTGCCCTGGATGCCCCGGGAAGCTCCCCGAGAGC
CTCGGTCTTGATCCTCCCGTAGTTACCAATGCTAGCCAGCGCGCGCCAGCCCGTGCAAAG
TCACCCCAATGCCAGGACTAAGCCATCCTAAAGCACAAAGATTGTGTCTCTGTCGATGAC
GAAGGCAGAGAAAAGAGTACGTGGCTTCTCTTTCATGTTTAAAAAGCCAACGCTGAAGCA
GACGACTCCGTGAGAGAGAGGCCCGAGCCCCGGGGAGGGGTGGGGACCCAGCCGACCTCA
GGCTGGTTTCCATGCTGCCACCACTTGGTTCAAAGCTGCCCCAAATTGGAACCTGCCACT
TGCCATTGGAGGGTCTTTCATGGGGAGAGGAGGAGGCTGAATTCCTCTAGGCAAAATGTG
AAAAGTAGGGAAATGGGCCTTTTTGTCCCGGTCCTGAGTGACAGTCAAAGGCTTTTTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACCTATATCAGGAAGCCTTTTTTTTTTTTTTTTTTAATTTCAGGAACTCTAAGAAACC
ATTATTTCAGGTTATGAAAGTATAACCAAGCATCCTTTTGGGCAGTTCTTTACCAAATGC
AGAAATCTTTCTTCTGGGCGCTCTTCTGTTCCACACGCCCTTTCCTTCTTGCCACTTACC
TTTGCAAAGTGCAAAGAAAAGGGGAGGAAGTACGAGATAAAGCTGAGATGTCCCTGTCCT
GCCTGCTTGTCCCCAAGACCCGGGGGCTGCCCTGGATGCCCCGGGAAGCTCCCCGAGAGC
CTCGGTCTTGATCCTCCCGTAGTTACCAATGCTAGCCAGCGCGCGCCAGCCCGTGCAAAG
TCACCCCAATGCCAGGACTAAGCCATCCTAAAGCACAAAGATTGTGTCTCTGTCGATGAC
GAAGGCAGAGAAAAGAGTACGTGGCTTCTCTTTCATGTTTAAAAAGCCAACGCTGAAGCA
GACGACTCCGTGAGAGAGAGGCCCGAGCCCCGGGGAGGGGTGGGGACCCAGCCGACCTCA
GGCTGGTTTCCATGCTGCCACCACTTGGTTCAAAGCTGCCCCAAATTGGAACCTGCCACT
TGCCATTGGAGGGTCTTTCATGGGGAGAGGAGGAGGCTGAATTCCTCTAGGCAAAATGTG
AAAAGTAGGGAAATGGGCCTTTTTGTCCCGGTCCTGAGTGACAGTCAAAGGCTTTTTGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               33-718, gnl|bosTau2|chr21 (43821533-43820847)
               

               
               33-718, gnl|Hg17|chr14 (98706503-98705846)
               

               
               33-718, gnl|Mm7|chr12 (105432972-105432326)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-718, gnl|bosTau2|chr21 (43821533-43820847)
               

               
               33-718, gnl|Hg17|chr14 (98706503-98705846)
               

               
               33-718, gnl|Mm7|chr12 (105432972-105432326)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csp (0.161186)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)

	33-718, gnl\|bosTau2\|chr21 (43821533-43820847)
	33-718, gnl\|Hg17\|chr14 (98706503-98705846)
	33-718, gnl\|Mm7\|chr12 (105432972-105432326)