Non-Coding RNA Search

Ss1.1-Thy1-THY010040F04.5

Sequence:


               
               AGTCTTTTTCACCTCCAGCTCACTGCAAAGGAACAAGAGTGCTAATCCCAGCAAGGCTTC
AGGGTATCATACCTTGATGAATATACTGAAATATTCAAGATGGATAGCAACAGTACCAGC
AATGCTGAGACTCACTGCAATGTTAATAATTTGACATTTCATTACCCCCTCTATGCAACC
ACCTACATCCTCATATTCATCCCTGGTCTATTGGCCAACAGTGCAGCCTTGTGGGTTTTG
TGCCGTTTCATCAGCAGGAAAAATAAAGCCATCATTTTCATGATCAACCTCTCTGTGGCT
GACCTTGCTCACGTGCTCTCCTTACCCCTCCGGATTTACTATTACATCAGCCAACACTGG
CCTTTTCAGAGGGCTCTTTGCCTGCTGTGCTTCTACCTGAAGTATCTCAACATGTATGCC
AGCATTTGTTTCCTGACATGCATCAGCCTTCAAAGGTGTTTCTTTCTCCTCAAGCCCTTC
AGGGCCAGAGACTGGAAACGTAGGTACGACGTGTGCATTAGTGCTGCCATCTGGGTCATT
GTGGGGACTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCTTTTTCACCTCCAGCTCACTGCAAAGGAACAAGAGTGCTAATCCCAGCAAGGCTTC
AGGGTATCATACCTTGATGAATATACTGAAATATTCAAGATGGATAGCAACAGTACCAGC
AATGCTGAGACTCACTGCAATGTTAATAATTTGACATTTCATTACCCCCTCTATGCAACC
ACCTACATCCTCATATTCATCCCTGGTCTATTGGCCAACAGTGCAGCCTTGTGGGTTTTG
TGCCGTTTCATCAGCAGGAAAAATAAAGCCATCATTTTCATGATCAACCTCTCTGTGGCT
GACCTTGCTCACGTGCTCTCCTTACCCCTCCGGATTTACTATTACATCAGCCAACACTGG
CCTTTTCAGAGGGCTCTTTGCCTGCTGTGCTTCTACCTGAAGTATCTCAACATGTATGCC
AGCATTTGTTTCCTGACATGCATCAGCCTTCAAAGGTGTTTCTTTCTCCTCAAGCCCTTC
AGGGCCAGAGACTGGAAACGTAGGTACGACGTGTGCATTAGTGCTGCCATCTGGGTCATT
GTGGGGACTGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|53130189|emb|CAG31449.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|53130189|emb|CAG31449.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               99-552, gnl|bosTau2|chrX (24370637-24371088)
               

               
               99-552, gnl|Hg17|chrX (78146559-78146999)
               

               
               99-552, gnl|Mm7|chrX (102498230-102498847)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               99-552, gnl|bosTau2|chrX (24370637-24371088)
               

               
               99-552, gnl|Hg17|chrX (78146559-78146999)
               

               
               99-552, gnl|Mm7|chrX (102498230-102498847)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cty (0.20816)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.20816)
               

               
               spl (0.143184)

	99-552, gnl\|bosTau2\|chrX (24370637-24371088)
	99-552, gnl\|Hg17\|chrX (78146559-78146999)
	99-552, gnl\|Mm7\|chrX (102498230-102498847)