Non-Coding RNA Search

Ss1.1-Thy1-THY010040G10.5

Sequence:


               
               GAATACAGAATCAGCATGGCTTTCTTTTGCTCAGAAACACTTGTTAAACTTGAAGATCTG
------------------------TGCCAGTATAATCCAGCTCTGGTGATGGCTCTCTTG
CTAGCTCACAGACAGCTGCCTTCTCCCTGTGTTTTTACATGGGGAGAGCTTGAAGGTTTT
CGGTGAATGGACCTAACTGGACTCTTTGAGATCATCAATAAACATGAGTGGTACCAAACC
TGATATACTGTGGGCACCACACCAGGTGGATAGATTTGTTGTATGTGACTCTGAACTTAG
CCTTTATCATGTGGAATCAACTGTGAATTCAGAACTCAAAGCTGGGTCTTTACGTTTATC
TGAAGACTCTGCAGCTACATTACTGTCAATAAATTCAGAAACACCCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATACAGAATCAGCATGGCTTTCTTTTGCTCAGAAACACTTGTTAAACTTGAAGATCTG
------------------------TGCCAGTATAATCCAGCTCTGGTGATGGCTCTCTTG
CTAGCTCACAGACAGCTGCCTTCTCCCTGTGTTTTTACATGGGGAGAGCTTGAAGGTTTT
CGGTGAATGGACCTAACTGGACTCTTTGAGATCATCAATAAACATGAGTGGTACCAAACC
TGATATACTGTGGGCACCACACCAGGTGGATAGATTTGTTGTATGTGACTCTGAACTTAG
CCTTTATCATGTGGAATCAACTGTGAATTCAGAACTCAAAGCTGGGTCTTTACGTTTATC
TGAAGACTCTGCAGCTACATTACTGTCAATAAATTCAGAAACACCCTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               150-384, gnl|bosTau2|chr4 (3534118-3533884)
               

               
               150-384, gnl|Hg17|chr7 (7385299-7385531)
               

               
               150-384, gnl|Mm7|chr6 (8173022-8173254)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-384, gnl|bosTau2|chr4 (3534118-3533884)
               

               
               150-384, gnl|Hg17|chr7 (7385299-7385531)
               

               
               150-384, gnl|Mm7|chr6 (8173022-8173254)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ssp (0.13552)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)
               

               
               ret (0.128733)

	150-384, gnl\|bosTau2\|chr4 (3534118-3533884)
	150-384, gnl\|Hg17\|chr7 (7385299-7385531)
	150-384, gnl\|Mm7\|chr6 (8173022-8173254)