Non-Coding RNA Search

Ss1.1-Thy1-THY010044G06.5

Sequence:


               
               CCTCTATGGCGATACATGACACAGAGAAAGATAAATGGGCATTGTGTACAAACTGTTTCT
CACCCCTCAATTAGGCCTATCAGTCAAGCATCCAGTTTTAAAATTACTTTGCTGCAACCT
TGTAAATATTGCTTTAAGATTCAGCCTGAGAGTTAGGAGAACTATTCCCCATAGCCAAAA
GTGCCTTATCAAGTCTTAGCCCAGGGCAGTAGATCCTTCAAGGGTTCAGGATTCTGTAGG
CACAGAACAGTGCATTTACTTTGTAGAGTGACAGAAGATACCATCGCCTGCCTTAATGTA
AGTAAGCCCAGAGTCTCACATTCAGGATCTTGATACATTGATAAAACTCTCAGTCTTTAA
TCAAATTTTGAAAACCTGACTTGCACCATAGGTGACTTTCTGAAATGCCATGTAAACCAT
TTGAATGTTAAATATGAATATATGCAAACGATGGTTCAGTGTTTGTGAGTGTTAATTTAT
GTAAGCATTCTCTTTAAAATGACTATAGGACAAATTATTGGCCTTATCTATAGACCCTGG
AGAAACTGGACTGACCAGTTATGTACTCACTGTGACTATTGTTTGTGGGAAAGGGATTGG
GAGTGAGGGCTAGGGTGGCTTAATATTGTATGAGCAATGGAAATGGGACTTCTGGCTCCC
TGCTGGATTCTCTTTGCTCCGACAGGTTGATTGAAGGGCCAGGGAACTAGATTTTTATGG
CTTTAGTTCATTGTGATCTGTGCATTTATACTTGGCTTATATGCTGGCCACATCTGAATG
TAGCTGGTGCTTATGCTAAAGTTATTTGTGATAAGTAAACACATAGCTTCGTTTTCTTCA
TATTTATAATGTTGTTCTGGCACCCTCAGACTGTAGTTTCAATTAGCTTGAGAACTACTA
ACCTTCTATTTTCACCATCAGGCTCTCTATTGTTCATCTTTGCAACTTTTTTTTTTAAAT
TGGGGGAATTAGTTTTTAATTACATAAAATGGCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCTATGGCGATACATGACACAGAGAAAGATAAATGGGCATTGTGTACAAACTGTTTCT
CACCCCTCAATTAGGCCTATCAGTCAAGCATCCAGTTTTAAAATTACTTTGCTGCAACCT
TGTAAATATTGCTTTAAGATTCAGCCTGAGAGTTAGGAGAACTATTCCCCATAGCCAAAA
GTGCCTTATCAAGTCTTAGCCCAGGGCAGTAGATCCTTCAAGGGTTCAGGATTCTGTAGG
CACAGAACAGTGCATTTACTTTGTAGAGTGACAGAAGATACCATCGCCTGCCTTAATGTA
AGTAAGCCCAGAGTCTCACATTCAGGATCTTGATACATTGATAAAACTCTCAGTCTTTAA
TCAAATTTTGAAAACCTGACTTGCACCATAGGTGACTTTCTGAAATGCCATGTAAACCAT
TTGAATGTTAAATATGAATATATGCAAACGATGGTTCAGTGTTTGTGAGTGTTAATTTAT
GTAAGCATTCTCTTTAAAATGACTATAGGACAAATTATTGGCCTTATCTATAGACCCTGG
AGAAACTGGACTGACCAGTTATGTACTCACTGTGACTATTGTTTGTGGGAAAGGGATTGG
GAGTGAGGGCTAGGGTGGCTTAATATTGTATGAGCAATGGAAATGGGACTTCTGGCTCCC
TGCTGGATTCTCTTTGCTCCGACAGGTTGATTGAAGGGCCAGGGAACTAGATTTTTATGG
CTTTAGTTCATTGTGATCTGTGCATTTATACTTGGCTTATATGCTGGCCACATCTGAATG
TAGCTGGTGCTTATGCTAAAGTTATTTGTGATAAGTAAACACATAGCTTCGTTTTCTTCA
TATTTATAATGTTGTTCTGGCACCCTCAGACTGTAGTTTCAATTAGCTTGAGAACTACTA
ACCTTCTATTTTCACCATCAGGCTCTCTATTGTTCATCTTTGCAACTTTTTTTTTTAAAT
TGGGGGAATTAGTTTTTAATTACATAAAATGGCTGT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               5-451, gnl|bosTau2|chr18 (28547963-28547526)
               

               
               5-451, gnl|Hg17|chr15 (53284943-53284506)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-451, gnl|bosTau2|chr18 (28547963-28547526)
               

               
               5-451, gnl|Hg17|chr15 (53284943-53284506)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               gul (0.177588)
               

               
               ill (0.175593)
               

               
               ski (0.146735)
               

               
               clu (0.119646)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               ill (0.175593)
               

               
               ski (0.146735)
               

               
               clu (0.119646)

	5-451, gnl\|bosTau2\|chr18 (28547963-28547526)
	5-451, gnl\|Hg17\|chr15 (53284943-53284506)