Non-Coding RNA Search

Ss1.1-Thy1-THY010047B07.5

Sequence:


               
               CACCTCTGTGGTGCCAGGCCGCCGGCGCCGCCGCTGCACTTCCGGGCGCCGTTTAAGGTG
AGCCAGGGTCTCCCCAAACCCCCTTAAGCTGCCTTTTCCCCTTAGTAAAGAACCCTCCCA
CCCCGCTCACAGAGGTCGCAGTCTGGCAGGTCTAGTACCCGGGTCTGGGTGCCTAGGCGG
AGGCCGGGTGGCCATCGGAGGAGGTAGAGCCATCTGGACGATTGGTCCCGGCGAGGCCCA
ACGCCTCAGAACCTCGCGCCTCTGCTCTGCTGCGCCGGAGAGCTCGCGCTTCTGGTCTCT
TGGCGATCCTGGCAGTCCGGAAGCGGAGTAGGACTCCTTCCTTTCGTTCCCTCGAGCCCC
GCCAGGCGGCGCCGTGAGCCTGGCCGGGATTCCCCCTGCGACTGCGAGCTTTGACCACCC
CAGGGGTGTTGAAATTGGCGAGGAGAGAGGCGGAGAAACGGGCTGTCAGAAAGCAGTCTA
CCACTTGGAATAAGTTTCTCTCGTGGACTGTGTTTTCCATCATTAGGATCTCCTGGAGCA
CATGTGCAAATGCCTGTGCTGCATTGCCGAAGATCCTGATTCAGGGGATCTGGGGTGGCG
CCTGGAAATCAGCATTTTAAAACAGCCGCTCCAGGTCGATGCCCATAGTCTGCGCACCTC
ACCTTCAGAAACTCTGGTATAACTGGTGGAGAGGAACATTGCACTGGGTTGGCTATGGGA
GTGTTTATCTTGAGGAAGACTTCCAAGAGGAAGTGATCCTAGCTGGGCTTTGTATTGAGA
GACTAGAAAATCCACTGGTTCTTTGCTTTACAGTTATGAATTCCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCTCTGTGGTGCCAGGCCGCCGGCGCCGCCGCTGCACTTCCGGGCGCCGTTTAAGGTG
AGCCAGGGTCTCCCCAAACCCCCTTAAGCTGCCTTTTCCCCTTAGTAAAGAACCCTCCCA
CCCCGCTCACAGAGGTCGCAGTCTGGCAGGTCTAGTACCCGGGTCTGGGTGCCTAGGCGG
AGGCCGGGTGGCCATCGGAGGAGGTAGAGCCATCTGGACGATTGGTCCCGGCGAGGCCCA
ACGCCTCAGAACCTCGCGCCTCTGCTCTGCTGCGCCGGAGAGCTCGCGCTTCTGGTCTCT
TGGCGATCCTGGCAGTCCGGAAGCGGAGTAGGACTCCTTCCTTTCGTTCCCTCGAGCCCC
GCCAGGCGGCGCCGTGAGCCTGGCCGGGATTCCCCCTGCGACTGCGAGCTTTGACCACCC
CAGGGGTGTTGAAATTGGCGAGGAGAGAGGCGGAGAAACGGGCTGTCAGAAAGCAGTCTA
CCACTTGGAATAAGTTTCTCTCGTGGACTGTGTTTTCCATCATTAGGATCTCCTGGAGCA
CATGTGCAAATGCCTGTGCTGCATTGCCGAAGATCCTGATTCAGGGGATCTGGGGTGGCG
CCTGGAAATCAGCATTTTAAAACAGCCGCTCCAGGTCGATGCCCATAGTCTGCGCACCTC
ACCTTCAGAAACTCTGGTATAACTGGTGGAGAGGAACATTGCACTGGGTTGGCTATGGGA
GTGTTTATCTTGAGGAAGACTTCCAAGAGGAAGTGATCCTAGCTGGGCTTTGTATTGAGA
GACTAGAAAATCCACTGGTTCTTTGCTTTACAGTTATGAATTCCCTCC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               1-600, gnl|bosTau2|chr8 (27881575-27881002)
               

               
               1-600, gnl|Hg17|chr9 (35086617-35086009)
               

               
               1-600, gnl|Mm7|chr4 (43039650-43039085)
               


               
               602-784, gnl|bosTau2|chr8 (27880738-27880555)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-600, gnl|bosTau2|chr8 (27881575-27881002)
               

               
               1-600, gnl|Hg17|chr9 (35086617-35086009)
               

               
               1-600, gnl|Mm7|chr4 (43039650-43039085)
               


               
               602-784, gnl|bosTau2|chr8 (27880738-27880555)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.170648)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)

	1-600, gnl\|bosTau2\|chr8 (27881575-27881002)
	1-600, gnl\|Hg17\|chr9 (35086617-35086009)
	1-600, gnl\|Mm7\|chr4 (43039650-43039085)

	602-784, gnl\|bosTau2\|chr8 (27880738-27880555)