Non-Coding RNA Search

Ss1.1-Thy1-THY010047C03.5

Sequence:


               
               TTATTTCATTCTGGTAATTGCAAACAGATTGTATTTGACGACTGTGTGGGTTGTCATTTC
CCGGAGACGTTGAAGTTCGACTTCCACGGACTACGTTCTAGTTATGAACACATTGCATGT
TGGGTGTATTTACAGAATTTATGTCCTGTTAGTGACATAGCAGACAGGAAACACCACGAG
TAGTGTCTGAACATCTGCGTGGGTACACACACGTGCACAGGTGCACACGCCTAGAGAGAG
AAGCGAGCGCACGGGCGAATTGGGGACACGGGGCAGCAGAGTGATCGCGGTAACTTCGGT
GTTGGTCTAGTGGTATCGAGTGCCCGGCACTGCTGACTGTCCTCCCCATACGGTATGGTC
CTGTCACAGCCTGATTCTCCCCACCTTAGAGATGAGGAAACCGAGACACAGACAGCTGCG
TAACCTGCCAGCGGTTTCACGGACGGTTGAGACTCTTAACCCAAAACTTCCTGAAGAGGG
ATTTGGTTCTGATGCAACTTGTAAGATACAAGCGCGAGGCAAGATGCTCTAAGTCATTCT
TTTCAGAAAGAAACTTGCCTCTAACAGAGTTAAGCACACTTCACTGCAGAACCTTGCACC
AGAAACTTCCCGAAAGTCCATTGCTTGTCTCATTTTCCCTGCGAGGGAAAGTGCAGAAAA
CGGTCCGCTTTAGTTCTTCGCCGCCAGAGCGAGTAGCCTAGAAAGCCTCCGTCTCGCGTC
ACTGCTGGAACGTAATCTAATAAAAGAAGATTAGTGAATGCAGAGGAGACAAAAGCAGGC
GTGTTTGAGTTTCATCTCTCTCAAATTTAGCATTTTAGCTAAGATGCCCGTTCTTCTCTC
TTGCAGGTCTGCTAAAAGGTCAGAGTGATGCAGAATGCGTGCCTTCATCTCAGATTTTGT
TCATCGCAGGTGGATCCCCTGTGTCTTCAGTAGACAAGTCACCTTTGTAGCACCAGTGCC
AGCTCCATGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATTTCATTCTGGTAATTGCAAACAGATTGTATTTGACGACTGTGTGGGTTGTCATTTC
CCGGAGACGTTGAAGTTCGACTTCCACGGACTACGTTCTAGTTATGAACACATTGCATGT
TGGGTGTATTTACAGAATTTATGTCCTGTTAGTGACATAGCAGACAGGAAACACCACGAG
TAGTGTCTGAACATCTGCGTGGGTACACACACGTGCACAGGTGCACACGCCTAGAGAGAG
AAGCGAGCGCACGGGCGAATTGGGGACACGGGGCAGCAGAGTGATCGCGGTAACTTCGGT
GTTGGTCTAGTGGTATCGAGTGCCCGGCACTGCTGACTGTCCTCCCCATACGGTATGGTC
CTGTCACAGCCTGATTCTCCCCACCTTAGAGATGAGGAAACCGAGACACAGACAGCTGCG
TAACCTGCCAGCGGTTTCACGGACGGTTGAGACTCTTAACCCAAAACTTCCTGAAGAGGG
ATTTGGTTCTGATGCAACTTGTAAGATACAAGCGCGAGGCAAGATGCTCTAAGTCATTCT
TTTCAGAAAGAAACTTGCCTCTAACAGAGTTAAGCACACTTCACTGCAGAACCTTGCACC
AGAAACTTCCCGAAAGTCCATTGCTTGTCTCATTTTCCCTGCGAGGGAAAGTGCAGAAAA
CGGTCCGCTTTAGTTCTTCGCCGCCAGAGCGAGTAGCCTAGAAAGCCTCCGTCTCGCGTC
ACTGCTGGAACGTAATCTAATAAAAGAAGATTAGTGAATGCAGAGGAGACAAAAGCAGGC
GTGTTTGAGTTTCATCTCTCTCAAATTTAGCATTTTAGCTAAGATGCCCGTTCTTCTCTC
TTGCAGGTCTGCTAAAAGGTCAGAGTGATGCAGAATGCGTGCCTTCATCTCAGATTTTGT
TCATCGCAGGTGGATCCCCTGTGTCTTCAGTAGACAAGTCACCTTTGTAGCACCAGTGCC
AGCTCCATGCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-972, gnl|bosTau2|chr3 (41489550-41488561)
               

               
               1-972, gnl|Hg17|chr1 (87521629-87522620)
               

               
               1-972, gnl|Mm7|chr3 (144083055-144082128)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-972, gnl|bosTau2|chr3 (41489550-41488561)
               

               
               1-972, gnl|Hg17|chr1 (87521629-87522620)
               

               
               1-972, gnl|Mm7|chr3 (144083055-144082128)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fty (0.17584)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	1-972, gnl\|bosTau2\|chr3 (41489550-41488561)
	1-972, gnl\|Hg17\|chr1 (87521629-87522620)
	1-972, gnl\|Mm7\|chr3 (144083055-144082128)