Ss1.1-Thy1-THY010052A09.5
|
TTTGGCCGATTCAAGATGGCGGTGCAGGAGTCCGCGGCTCAGCTCTCTATGACCCTGAAG
GTGCAGGAGTACCCGACCCTCAAGGTGCCCTACGAGACCCTGAACAAGCGCTTCCGCGCC
GCGCAGAAGAACATCGACCGAGAGACGAGCCACGTCACCATGGTGGTGGCCGAGCTGGAG
AAGACCCTGAGCAGCTGTCCGGCCGTGGACTCCGTGGTCAGCCTCCTGGACGGTGTGGTG
GAGAAGCTCAGTGTCCTCAAGAGGAAGGCAGTGGAGTCCATCCAGGCGGAGGACGAGAGC
GCCAAGCTGTGCAAGCGCAGGATCGAGCACCTCAAGGAGCACAGCAGCGACCAGCCCGCG
GCGGCCGGGCTGTGGAAGCGGAAGCGCATGGACCGCATGATGGTGGAGCACCTGCTGCGC
TGCGGCTACTACAACACCGCCGTGAAGCTGGCGCGCCAGAGCGGCATCGAGGACCTGGTG
AACATCGAGATGTTCCTGACGGCCAAGGAGGTGGAGGAGTCCTTGGAGAGGCGAGAGACC
GCCACCTGCCTGGCTTGGTGCCACGACAACAAGTCGCGGCTGCGCAAGATGAAGGGCCGC
CAAAGCGAGCACGATGCGAAGACGGGACGGAAAAGTAGAGTGGCCAGTGGCTCCCCTAAA
GAGAGTGAGGATCTTGGTATGGAAACCATAAAAGGAAAGCCAGAATTGAGCTGTCTGGAG
TTCAGCCTGAGGATCCAGGAGTTCTTGAGCTCATCCGGCAGAACAAGAGGCTGGACGCCG
TCAGACACGCAAGAAAGCACTTCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTTGGCCGATTCAAGATGGCGGTGCAGGAGTCCGCGGCTCAGCTCTCTATGACCCTGAAG
GTGCAGGAGTACCCGACCCTCAAGGTGCCCTACGAGACCCTGAACAAGCGCTTCCGCGCC
GCGCAGAAGAACATCGACCGAGAGACGAGCCACGTCACCATGGTGGTGGCCGAGCTGGAG
AAGACCCTGAGCAGCTGTCCGGCCGTGGACTCCGTGGTCAGCCTCCTGGACGGTGTGGTG
GAGAAGCTCAGTGTCCTCAAGAGGAAGGCAGTGGAGTCCATCCAGGCGGAGGACGAGAGC
GCCAAGCTGTGCAAGCGCAGGATCGAGCACCTCAAGGAGCACAGCAGCGACCAGCCCGCG
GCGGCCGGGCTGTGGAAGCGGAAGCGCATGGACCGCATGATGGTGGAGCACCTGCTGCGC
TGCGGCTACTACAACACCGCCGTGAAGCTGGCGCGCCAGAGCGGCATCGAGGACCTGGTG
AACATCGAGATGTTCCTGACGGCCAAGGAGGTGGAGGAGTCCTTGGAGAGGCGAGAGACC
GCCACCTGCCTGGCTTGGTGCCACGACAACAAGTCGCGGCTGCGCAAGATGAAGGGCCGC
CAAAGCGAGCACGATGCGAAGACGGGACGGAAAAGTAGAGTGGCCAGTGGCTCCCCTAAA
GAGAGTGAGGATCTTGGTATGGAAACCATAAAAGGAAAGCCAGAATTGAGCTGTCTGGAG
TTCAGCCTGAGGATCCAGGAGTTCTTGAGCTCATCCGGCAGAACAAGAGGCTGGACGCCG
TCAGACACGCAAGAAAGCACTTCA
|
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gi|55622094|ref|XP_517061.1| |
Protein identifier
|
gi|55622094|ref|XP_517061.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
266-472, gnl|bosTau2|chr6 (64611655-64611449) |
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266-472, gnl|canFam2|chr3 (65517648-65517422) |
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266-472, gnl|echTel1|scaffold_280185 (9250-9479) |
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266-472, gnl|fr1|chrUn (32998852-32999084) |
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266-472, gnl|galGal2|chrUn (124651640-124651408) |
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266-472, gnl|hg17|chr4 (1298996-1299243) |
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266-472, gnl|Hg17|chr4 (1299013-1299219) |
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266-472, gnl|loxAfr1|scaffold_18823 (14774-15008) |
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266-472, gnl|mm7|chr5 (32423483-32423705) |
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266-472, gnl|Mm7|chr5 (32423494-32423700) |
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266-472, gnl|monDom2|scaffold_10 (45895520-45895293) |
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266-472, gnl|panTro1|chr3 (1388372-1388619) |
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266-472, gnl|rheMac2|chr1 (2630161-2629917) |
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266-472, gnl|rn3|chr14 (83148719-83148937) |
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266-472, gnl|tetNig1|chr1 (5766926-5767153) |
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266-472, gnl|xenTro1|scaffold_1163 (204258-204484) |
| |
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593-708, gnl|bosTau2|chr6 (64607581-64607466) |
|
593-708, gnl|Hg17|chr4 (1307111-1307226) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
266-472, gnl|bosTau2|chr6 (64611655-64611449) |
|
266-472, gnl|canFam2|chr3 (65517648-65517422) |
|
266-472, gnl|echTel1|scaffold_280185 (9250-9479) |
|
266-472, gnl|fr1|chrUn (32998852-32999084) |
|
266-472, gnl|galGal2|chrUn (124651640-124651408) |
|
266-472, gnl|hg17|chr4 (1298996-1299243) |
|
266-472, gnl|Hg17|chr4 (1299013-1299219) |
|
266-472, gnl|loxAfr1|scaffold_18823 (14774-15008) |
|
266-472, gnl|mm7|chr5 (32423483-32423705) |
|
266-472, gnl|Mm7|chr5 (32423494-32423700) |
|
266-472, gnl|monDom2|scaffold_10 (45895520-45895293) |
|
266-472, gnl|panTro1|chr3 (1388372-1388619) |
|
266-472, gnl|rheMac2|chr1 (2630161-2629917) |
|
266-472, gnl|rn3|chr14 (83148719-83148937) |
|
266-472, gnl|tetNig1|chr1 (5766926-5767153) |
|
266-472, gnl|xenTro1|scaffold_1163 (204258-204484) |
| |
|
593-708, gnl|bosTau2|chr6 (64607581-64607466) |
|
593-708, gnl|Hg17|chr4 (1307111-1307226) |
|
nep (0.183925) |
|
nco (0.161734) |
|
pla (0.133672) |
|
nep (0.183925) |
|
nco (0.161734) |
|
pla (0.133672) |
