Ss1.1-Thy1-THY010052D03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGCCCGGATTAGTGAAGCAGCCAGTGCTGCAGCGGCTGTCGTCTTCCTTGTCCCCGCC GCCGCGCGAAGGAAGCAGCCCAGAAACTCCGGCCGGGAAGATGGAAGATGGTGCCCCAAA GCATATCATCCAGATGACAGGATTTAAGATGGAAGAAAAAGAAGCTCTAGGCAAATTGCT TTTAAAACTAGATTGCACTTTTATTAAGAGTGAGAAATACAAAAATTGTACACATCTTAT AGCTGAACGTCTGTGTAAGAGTGAGAAATTTTTAGCAGCTTGTGCAGCAGGAAAGTGGGT ACTAACTAAGGACTACATTATTCATAGTGCCAAAAGTGGCAGGTGGCTTGATGAAACAAC TTATGAATGGGGATATAAGATTGAAAAAGATTCCCATTATTCACCTCAAATGCAATCTGC ACCTAAAAGATGGCGTGAAGAGCTAAAACGAACTGGTGCTCCAGGAGCCTTCCATAGATG GAAAGTTGTCCTCCTTGCTAGAACTGATAAACGAAGTGATTCTCTTGTAAGAGTTTTGGA GGCTGGAAAAGCAAATGTTATTTTACCAAAAAATTCACCAAGTGGAATAACTCATGTAAT TGCCAGTAATGCGAGAATCAAGGCTGAACAAGGAAAAGATAACTTCAAGGCTCCATTTTA TCCAATTCAGTATCTAGGGGATTTTCTTTTAGAGAAAGAAATTCAGAATGATGAAGATTC CCAAACCAGTTCTGTTTGGAATAACCATAATAATCAAGAAAAAAAAAAAGATTTCAGGAA AGATATGGGATTTCTTGAAATGAAAGGTGCCTTAAAAGAAACCATGTGCAGAGCCCGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGCCCGGATTAGTGAAGCAGCCAGTGCTGCAGCGGCTGTCGTCTTCCTTGTCCCCGCC GCCGCGCGAAGGAAGCAGCCCAGAAACTCCGGCCGGGAAGATGGAAGATGGTGCCCCAAA GCATATCATCCAGATGACAGGATTTAAGATGGAAGAAAAAGAAGCTCTAGGCAAATTGCT TTTAAAACTAGATTGCACTTTTATTAAGAGTGAGAAATACAAAAATTGTACACATCTTAT AGCTGAACGTCTGTGTAAGAGTGAGAAATTTTTAGCAGCTTGTGCAGCAGGAAAGTGGGT ACTAACTAAGGACTACATTATTCATAGTGCCAAAAGTGGCAGGTGGCTTGATGAAACAAC TTATGAATGGGGATATAAGATTGAAAAAGATTCCCATTATTCACCTCAAATGCAATCTGC ACCTAAAAGATGGCGTGAAGAGCTAAAACGAACTGGTGCTCCAGGAGCCTTCCATAGATG GAAAGTTGTCCTCCTTGCTAGAACTGATAAACGAAGTGATTCTCTTGTAAGAGTTTTGGA GGCTGGAAAAGCAAATGTTATTTTACCAAAAAATTCACCAAGTGGAATAACTCATGTAAT TGCCAGTAATGCGAGAATCAAGGCTGAACAAGGAAAAGATAACTTCAAGGCTCCATTTTA TCCAATTCAGTATCTAGGGGATTTTCTTTTAGAGAAAGAAATTCAGAATGATGAAGATTC CCAAACCAGTTCTGTTTGGAATAACCATAATAATCAAGAAAAAAAAAAAGATTTCAGGAA AGATATGGGATTTCTTGAAATGAAAGGTGCCTTAAAAGAAACCATGTGCAGAGCCCGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 99-214, gnl|bosTau2|chr7 (58477238-58477353) | |
| 99-214, gnl|Hg17|chr5 (93990270-93990385) | |
| 99-214, gnl|Mm7|chr13 (74140380-74140265) | |
| 333-531, gnl|bosTau2|chr7 (58478978-58479176) | |
| 333-531, gnl|canFam2|chr3 (17737611-17737404) | |
| 333-531, gnl|dasNov1|scaffold_11123 (39180-38976) | |
| 333-531, gnl|echTel1|scaffold_118750 (688-896) | |
| 333-531, gnl|galGal2|chrW (2921747-2921957) | |
| 333-531, gnl|hg17|chr5 (93992007-93992214) | |
| 333-531, gnl|Hg17|chr5 (93992006-93992204) | |
| 333-531, gnl|loxAfr1|scaffold_55677 (8312-8104) | |
| 333-531, gnl|mm7|chr13 (74139093-74138886) | |
| 333-531, gnl|Mm7|chr13 (74139092-74138894) | |
| 333-531, gnl|monDom2|scaffold_20 (3611618-3611408) | |
| 333-531, gnl|oryCun1|scaffold_62314 (308-101) | |
| 333-531, gnl|panTro1|chr4 (21210543-21210336) | |
| 333-531, gnl|rheMac2|chr6 (90855922-90856129) | |
| 333-531, gnl|rn3|chr2 (4482823-4482616) | |
| 333-531, gnl|xenTro1|scaffold_45 (2156121-2155910) | |
| 690-832, gnl|bosTau2|chr7 (58488462-58488604) | |
| 690-832, gnl|canFam2|chr3 (17725857-17725642) | |
| 690-832, gnl|echTel1|scaffold_229125 (6081-6292) | |
| 690-832, gnl|hg17|chr5 (94010836-94011053) | |
| 690-832, gnl|Hg17|chr5 (94010910-94011052) | |
| 690-832, gnl|loxAfr1|scaffold_125 (128248-128053) | |
| 690-832, gnl|mm7|chr13 (74119860-74119647) | |
| 690-832, gnl|Mm7|chr13 (74119773-74119646) | |
| 690-832, gnl|monDom2|scaffold_20 (3606675-3606474) | |
| 690-832, gnl|oryCun1|scaffold_38649 (415-198) | |
| 690-832, gnl|panTro1|chr4 (21191736-21191519) | |
| 690-832, gnl|rheMac2|chr6 (90874559-90874776) | |
| 690-832, gnl|rn3|chr2 (4453246-4453014) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 99-214, gnl|bosTau2|chr7 (58477238-58477353) | |
| 99-214, gnl|Hg17|chr5 (93990270-93990385) | |
| 99-214, gnl|Mm7|chr13 (74140380-74140265) | |
| 333-531, gnl|bosTau2|chr7 (58478978-58479176) | |
| 333-531, gnl|canFam2|chr3 (17737611-17737404) | |
| 333-531, gnl|dasNov1|scaffold_11123 (39180-38976) | |
| 333-531, gnl|echTel1|scaffold_118750 (688-896) | |
| 333-531, gnl|galGal2|chrW (2921747-2921957) | |
| 333-531, gnl|hg17|chr5 (93992007-93992214) | |
| 333-531, gnl|Hg17|chr5 (93992006-93992204) | |
| 333-531, gnl|loxAfr1|scaffold_55677 (8312-8104) | |
| 333-531, gnl|mm7|chr13 (74139093-74138886) | |
| 333-531, gnl|Mm7|chr13 (74139092-74138894) | |
| 333-531, gnl|monDom2|scaffold_20 (3611618-3611408) | |
| 333-531, gnl|oryCun1|scaffold_62314 (308-101) | |
| 333-531, gnl|panTro1|chr4 (21210543-21210336) | |
| 333-531, gnl|rheMac2|chr6 (90855922-90856129) | |
| 333-531, gnl|rn3|chr2 (4482823-4482616) | |
| 333-531, gnl|xenTro1|scaffold_45 (2156121-2155910) | |
| 690-832, gnl|bosTau2|chr7 (58488462-58488604) | |
| 690-832, gnl|canFam2|chr3 (17725857-17725642) | |
| 690-832, gnl|echTel1|scaffold_229125 (6081-6292) | |
| 690-832, gnl|hg17|chr5 (94010836-94011053) | |
| 690-832, gnl|Hg17|chr5 (94010910-94011052) | |
| 690-832, gnl|loxAfr1|scaffold_125 (128248-128053) | |
| 690-832, gnl|mm7|chr13 (74119860-74119647) | |
| 690-832, gnl|Mm7|chr13 (74119773-74119646) | |
| 690-832, gnl|monDom2|scaffold_20 (3606675-3606474) | |
| 690-832, gnl|oryCun1|scaffold_38649 (415-198) | |
| 690-832, gnl|panTro1|chr4 (21191736-21191519) | |
| 690-832, gnl|rheMac2|chr6 (90874559-90874776) | |
| 690-832, gnl|rn3|chr2 (4453246-4453014) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |