Ss1.1-Thy1-THY010053C08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATCCCGGGGCCGCGGCGACTGGTAGTTCACTCGGCGGCAGCGGAGCCGGGCGGAGGGGG CGAGCGCGGGGCGCGCGGGCGGGAAGCGAGGAGGCGGGCGGGCCAGTGAGGAGAGCGGAG AGAAAAGGCGCGAGCGGCCGAGAGGGCACGGGCCGGACACCTTGCTGCCGCCGCCGCCGC CGCCGCTGCGGCCGAGCCTCCCCTGAGCTTACTGATCCATCTCCAGGGCCACCGCCATGT CCAGCCGGGGTGGGAAGAAGAAGTCCACCAAAACCTCCCGGTCCGCCAAGGCGGGCGTCA TCTTCCCCGTGGGCCGGATGCTGCGGTACATCAAGAAAGGCCACCCCAAGTACAGGATTG GAGTGGGGGCGCCGGTGTACATGGCCGCCGTCCTGGAGTACCTGACAGCGGAGATTCTGG AACTGGCTGGCAACGCAGCAAGAGACAACAAGAAGGGCCGGGTCACCCCCCGACACATCC TGCTGGCTGTGGCCAACGACGAAGAGCTCAATCAGCTGCTAAAAGGAGTCACCATAGCCA GCGGAGGGGTGTTACCGAACATCCACCCGGAGCTGCTAGCGAAGAAACGAGGATCCAAAG GGAAGTTGGAAGCCATCATCACGCCACCCCCAGCCAAAAAGGCCAAGTCTCCGTCCCAGA AGAAGCCCGTGTCTAAGAAAACAGGCGGCAAGAAGGGGGCCCGGAAATCCAAGAAGCAGG GAGAAGTCAGCAAGGCAGCCAGCGCCGACAGCACAACTGAGGGCACTCCCGCCGACGGCT TCACCGTGCTCTCCACCAAGAGCCTCTTCCTCGGCCAGAAGCTGAACCTTATTCACAGTG AAATCAGTAATTTAGCCGGCTTTGAGGTGGAGGCCATCCACCCCAGGGCCACTCCTGGCC TTGTTGGTGGGCGTAGGTGGACAGAGTGGGCAGCAGGGGCTTTAGGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATCCCGGGGCCGCGGCGACTGGTAGTTCACTCGGCGGCAGCGGAGCCGGGCGGAGGGGG CGAGCGCGGGGCGCGCGGGCGGGAAGCGAGGAGGCGGGCGGGCCAGTGAGGAGAGCGGAG AGAAAAGGCGCGAGCGGCCGAGAGGGCACGGGCCGGACACCTTGCTGCCGCCGCCGCCGC CGCCGCTGCGGCCGAGCCTCCCCTGAGCTTACTGATCCATCTCCAGGGCCACCGCCATGT CCAGCCGGGGTGGGAAGAAGAAGTCCACCAAAACCTCCCGGTCCGCCAAGGCGGGCGTCA TCTTCCCCGTGGGCCGGATGCTGCGGTACATCAAGAAAGGCCACCCCAAGTACAGGATTG GAGTGGGGGCGCCGGTGTACATGGCCGCCGTCCTGGAGTACCTGACAGCGGAGATTCTGG AACTGGCTGGCAACGCAGCAAGAGACAACAAGAAGGGCCGGGTCACCCCCCGACACATCC TGCTGGCTGTGGCCAACGACGAAGAGCTCAATCAGCTGCTAAAAGGAGTCACCATAGCCA GCGGAGGGGTGTTACCGAACATCCACCCGGAGCTGCTAGCGAAGAAACGAGGATCCAAAG GGAAGTTGGAAGCCATCATCACGCCACCCCCAGCCAAAAAGGCCAAGTCTCCGTCCCAGA AGAAGCCCGTGTCTAAGAAAACAGGCGGCAAGAAGGGGGCCCGGAAATCCAAGAAGCAGG GAGAAGTCAGCAAGGCAGCCAGCGCCGACAGCACAACTGAGGGCACTCCCGCCGACGGCT TCACCGTGCTCTCCACCAAGAGCCTCTTCCTCGGCCAGAAGCTGAACCTTATTCACAGTG AAATCAGTAATTTAGCCGGCTTTGAGGTGGAGGCCATCCACCCCAGGGCCACTCCTGGCC TTGTTGGTGGGCGTAGGTGGACAGAGTGGGCAGCAGGGGCTTTAGGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 279-586, gnl|bosTau2|chr12 (1673178-1672871) | |
| 279-586, gnl|Hg17|chr6 (26380711-26380415) | |
| 279-586, gnl|Mm7|chr13 (22899951-22900258) | |
| 711-821, gnl|bosTau2|chr7 (33077489-33077599) | |
| 711-821, gnl|canFam2|chr11 (26407731-26407862) | |
| 711-821, gnl|danRer3|chr9 (927082-926972) | |
| 711-821, gnl|dasNov1|scaffold_7826 (40295-40174) | |
| 711-821, gnl|echTel1|scaffold_308799 (13203-13334) | |
| 711-821, gnl|galGal2|chr13 (14345857-14345733) | |
| 711-821, gnl|hg17|chr5 (134724068-134724199) | |
| 711-821, gnl|Hg17|chr5 (134724196-134724086) | |
| 711-821, gnl|loxAfr1|scaffold_10451 (54076-54207) | |
| 711-821, gnl|mm7|chr13 (55185511-55185637) | |
| 711-821, gnl|Mm7|chr13 (55185634-55185524) | |
| 711-821, gnl|monDom2|scaffold_6 (99630021-99630138) | |
| 711-821, gnl|oryCun1|scaffold_183523 (178033-178164) | |
| 711-821, gnl|panTro1|chr4 (141079692-141079823) | |
| 711-821, gnl|rheMac2|chr6 (131786440-131786571) | |
| 711-821, gnl|rn3|chr17 (14497102-14496974) | |
| 711-821, gnl|tetNig1|chr7 (7789081-7788968) | |
| 711-821, gnl|xenTro1|scaffold_641 (177424-177541) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 279-586, gnl|bosTau2|chr12 (1673178-1672871) | |
| 279-586, gnl|Hg17|chr6 (26380711-26380415) | |
| 279-586, gnl|Mm7|chr13 (22899951-22900258) | |
| 711-821, gnl|bosTau2|chr7 (33077489-33077599) | |
| 711-821, gnl|canFam2|chr11 (26407731-26407862) | |
| 711-821, gnl|danRer3|chr9 (927082-926972) | |
| 711-821, gnl|dasNov1|scaffold_7826 (40295-40174) | |
| 711-821, gnl|echTel1|scaffold_308799 (13203-13334) | |
| 711-821, gnl|galGal2|chr13 (14345857-14345733) | |
| 711-821, gnl|hg17|chr5 (134724068-134724199) | |
| 711-821, gnl|Hg17|chr5 (134724196-134724086) | |
| 711-821, gnl|loxAfr1|scaffold_10451 (54076-54207) | |
| 711-821, gnl|mm7|chr13 (55185511-55185637) | |
| 711-821, gnl|Mm7|chr13 (55185634-55185524) | |
| 711-821, gnl|monDom2|scaffold_6 (99630021-99630138) | |
| 711-821, gnl|oryCun1|scaffold_183523 (178033-178164) | |
| 711-821, gnl|panTro1|chr4 (141079692-141079823) | |
| 711-821, gnl|rheMac2|chr6 (131786440-131786571) | |
| 711-821, gnl|rn3|chr17 (14497102-14496974) | |
| 711-821, gnl|tetNig1|chr7 (7789081-7788968) | |
| 711-821, gnl|xenTro1|scaffold_641 (177424-177541) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| fty (0.351679) | |
| eep (0.122564) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| cty (0.10408) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.351679) | |
| eep (0.122564) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| cty (0.10408) |