Ss1.1-Thy1-THY010053F12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAGTCGTGACGTGCAGGAAACCATTACAACACCGCTCGGGCCGTGCTCTCTGGCCGCT GCCGCCACCCCCACCCTTGCCTCCGGTGCACATTAAAGATCCAAAACCATGACTGACTCC AAGTACTTCACAACCAATAAAAAAGGAGAAATCTTTGAATTAAAGGCTGAACTCAACAAT GAAAAGAAAGAAAAGAGGAAGGAGGCTGTGAAGAAAGTGATTGCTGCTATGACTGTGGGG AAGGATGTTAGCTCTCTGTTTCCAGATGTAGTGAATTGTATGCAGACTGACAACCTGGAA CTAAAGAAGCTTGTGTATCTCTATTTGATGAACTATGCCAAGAGTCAGCCAGACATGGCC ATCATGGCTGTCAACAGCTTTGTGAAGGACTGTGAAGATCCCAATCCTCTGATTCGGGCC TTGGCAGTCAGAACCATGGGGTGTATCCGGGTGGACAAGATTACGGAATATCTCTGTGAA CCCCTCCGCAAGTGCTTAAAGGATGAAGATCCCTATGTTCGGAAGACAGCAGCAGTCTGT GTGGCAAAACTCCATGACATCAATGCCCAGATGGTTGAAGATCAGGGATTTCTGGATTCT CTGCGGGACCTCATAGCAGATTCAAATCCAATGGTGGTGGCTAATGCTGTAGCAGCATTA TCTGAAATCAGTGAATCTCACCCAAACAGCAACTTACTTGATCTGAATCCACAGAACATC AATAAGCTCCTTACAGCCCTGAATGAATGCACTGAATGGGGCCAGATTTTCATCCTGGAC TGCCTGTCTAATTACAACCCTAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAGTCGTGACGTGCAGGAAACCATTACAACACCGCTCGGGCCGTGCTCTCTGGCCGCT GCCGCCACCCCCACCCTTGCCTCCGGTGCACATTAAAGATCCAAAACCATGACTGACTCC AAGTACTTCACAACCAATAAAAAAGGAGAAATCTTTGAATTAAAGGCTGAACTCAACAAT GAAAAGAAAGAAAAGAGGAAGGAGGCTGTGAAGAAAGTGATTGCTGCTATGACTGTGGGG AAGGATGTTAGCTCTCTGTTTCCAGATGTAGTGAATTGTATGCAGACTGACAACCTGGAA CTAAAGAAGCTTGTGTATCTCTATTTGATGAACTATGCCAAGAGTCAGCCAGACATGGCC ATCATGGCTGTCAACAGCTTTGTGAAGGACTGTGAAGATCCCAATCCTCTGATTCGGGCC TTGGCAGTCAGAACCATGGGGTGTATCCGGGTGGACAAGATTACGGAATATCTCTGTGAA CCCCTCCGCAAGTGCTTAAAGGATGAAGATCCCTATGTTCGGAAGACAGCAGCAGTCTGT GTGGCAAAACTCCATGACATCAATGCCCAGATGGTTGAAGATCAGGGATTTCTGGATTCT CTGCGGGACCTCATAGCAGATTCAAATCCAATGGTGGTGGCTAATGCTGTAGCAGCATTA TCTGAAATCAGTGAATCTCACCCAAACAGCAACTTACTTGATCTGAATCCACAGAACATC AATAAGCTCCTTACAGCCCTGAATGAATGCACTGAATGGGGCCAGATTTTCATCCTGGAC TGCCTGTCTAATTACAACCCTAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 144-251, gnl|bosTau2|chr17 (39381854-39381747) | |
| 144-251, gnl|canFam2|chr26 (25695817-25695946) | |
| 144-251, gnl|danRer3|chr5 (14298867-14298753) | |
| 144-251, gnl|dasNov1|scaffold_67839 (7718-7585) | |
| 144-251, gnl|echTel1|scaffold_133722 (696-800) | |
| 144-251, gnl|fr1|chrUn (2107426-2107306) | |
| 144-251, gnl|galGal2|chr15 (10993927-10993815) | |
| 144-251, gnl|hg17|chr22 (28083519-28083652) | |
| 144-251, gnl|Hg17|chr22 (28083651-28083544) | |
| 144-251, gnl|loxAfr1|scaffold_8358 (44405-44536) | |
| 144-251, gnl|mm7|chr11 (4965016-4964884) | |
| 144-251, gnl|Mm7|chr11 (4964883-4964990) | |
| 144-251, gnl|monDom2|scaffold_89 (3150944-3151072) | |
| 144-251, gnl|oryCun1|scaffold_83489 (3533-3663) | |
| 144-251, gnl|panTro1|chr23_random (8701278-8701411) | |
| 144-251, gnl|rheMac2|chr10 (73191734-73191867) | |
| 144-251, gnl|rn3|chr14 (85686210-85686078) | |
| 144-251, gnl|tetNig1|chr12 (6673973-6673855) | |
| 144-251, gnl|xenTro1|scaffold_207 (428662-428788) | |
| 386-636, gnl|bosTau2|chr17 (39378141-39377891) | |
| 386-636, gnl|Hg17|chr22 (28079516-28079266) | |
| 386-636, gnl|Mm7|chr11 (4968607-4968857) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 144-251, gnl|bosTau2|chr17 (39381854-39381747) | |
| 144-251, gnl|canFam2|chr26 (25695817-25695946) | |
| 144-251, gnl|danRer3|chr5 (14298867-14298753) | |
| 144-251, gnl|dasNov1|scaffold_67839 (7718-7585) | |
| 144-251, gnl|echTel1|scaffold_133722 (696-800) | |
| 144-251, gnl|fr1|chrUn (2107426-2107306) | |
| 144-251, gnl|galGal2|chr15 (10993927-10993815) | |
| 144-251, gnl|hg17|chr22 (28083519-28083652) | |
| 144-251, gnl|Hg17|chr22 (28083651-28083544) | |
| 144-251, gnl|loxAfr1|scaffold_8358 (44405-44536) | |
| 144-251, gnl|mm7|chr11 (4965016-4964884) | |
| 144-251, gnl|Mm7|chr11 (4964883-4964990) | |
| 144-251, gnl|monDom2|scaffold_89 (3150944-3151072) | |
| 144-251, gnl|oryCun1|scaffold_83489 (3533-3663) | |
| 144-251, gnl|panTro1|chr23_random (8701278-8701411) | |
| 144-251, gnl|rheMac2|chr10 (73191734-73191867) | |
| 144-251, gnl|rn3|chr14 (85686210-85686078) | |
| 144-251, gnl|tetNig1|chr12 (6673973-6673855) | |
| 144-251, gnl|xenTro1|scaffold_207 (428662-428788) | |
| 386-636, gnl|bosTau2|chr17 (39378141-39377891) | |
| 386-636, gnl|Hg17|chr22 (28079516-28079266) | |
| 386-636, gnl|Mm7|chr11 (4968607-4968857) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.253004) | |
| ute (0.132784) | |
| cty (0.10408) |