Ss1.1-Thy1-THY010057D09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACGTCCTCGCCGCCGCGCCGCCGGTCCGGTCGTGCGAGGCCTGACCGAGAGCCGCCCGCT CGCTGCCGCCGCCACCGCCGCCTGCCCGGCCCCAGCGCATATCTCGCCCCACTGCCCGCC CGGCCCACTAGACATCGCTCCGGAGTCCGCGCCCCCCAGGCCACCCCCGCGCGCCCCCAG CCATGCTGTCCTTCCAGTACCCCGACGTGTACCGCGACGAGACCGCCATCCAGGATTATC ATGGACATAAAGTCTGTGACCCTTACGCTTGGCTTGAAGACCCAGACAGCGAGCAGACGA AGGCTTTCGTGGAAGCCCAGAACAAGATCACTGTGCCATTTCTTGAGCAGTGTCCTATCA GAGGTTTATACAAAGAGAGGATGACTGAATTGTATGACTACCCCAAGTATAGTTGCCACT TCAAAAAAGGAAAAAGGTATTTCTATTTTTACAATACAGGTTTGCAGAACCAACGAGTAT TATATGTACAGGATTCCTTAGAGGGGGAAGCCAGAGTGTTCCTCGACCCCAACATACTCT CTGATGACGGCACGGTGGCACTCCGAGGCTATGCATTCAGTGAAGATGGTGAATATTTTG CATATGGTCTGAGTGCCAGCGGCTCAGACTGGGTGACGATCAAGTTCATGAAAGTCGATG GTGCCAAAGAGCTTCCGGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCC ATGATGGGAAGGGAATGTTCTACAATGCATACCCCCAACAGGATGGGAAAAGTGATGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACGTCCTCGCCGCCGCGCCGCCGGTCCGGTCGTGCGAGGCCTGACCGAGAGCCGCCCGCT CGCTGCCGCCGCCACCGCCGCCTGCCCGGCCCCAGCGCATATCTCGCCCCACTGCCCGCC CGGCCCACTAGACATCGCTCCGGAGTCCGCGCCCCCCAGGCCACCCCCGCGCGCCCCCAG CCATGCTGTCCTTCCAGTACCCCGACGTGTACCGCGACGAGACCGCCATCCAGGATTATC ATGGACATAAAGTCTGTGACCCTTACGCTTGGCTTGAAGACCCAGACAGCGAGCAGACGA AGGCTTTCGTGGAAGCCCAGAACAAGATCACTGTGCCATTTCTTGAGCAGTGTCCTATCA GAGGTTTATACAAAGAGAGGATGACTGAATTGTATGACTACCCCAAGTATAGTTGCCACT TCAAAAAAGGAAAAAGGTATTTCTATTTTTACAATACAGGTTTGCAGAACCAACGAGTAT TATATGTACAGGATTCCTTAGAGGGGGAAGCCAGAGTGTTCCTCGACCCCAACATACTCT CTGATGACGGCACGGTGGCACTCCGAGGCTATGCATTCAGTGAAGATGGTGAATATTTTG CATATGGTCTGAGTGCCAGCGGCTCAGACTGGGTGACGATCAAGTTCATGAAAGTCGATG GTGCCAAAGAGCTTCCGGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCC ATGATGGGAAGGGAATGTTCTACAATGCATACCCCCAACAGGATGGGAAAAGTGATGGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 301-440, gnl|bosTau2|chr9 (26197418-26197279) | |
| 301-440, gnl|Hg17|chr6 (105932089-105931952) | |
| 301-440, gnl|Mm7|chr10 (44904305-44904444) | |
| 566-778, gnl|bosTau2|chr9 (26193299-26193087) | |
| 566-778, gnl|canFam2|chr12 (65800890-65801116) | |
| 566-778, gnl|danRer3|chrNA (95012814-95013015) | |
| 566-778, gnl|dasNov1|scaffold_1323 (46340-46566) | |
| 566-778, gnl|echTel1|scaffold_315622 (47431-47657) | |
| 566-778, gnl|fr1|chrUn (266368886-266368660) | |
| 566-778, gnl|galGal2|chr3 (67109839-67109614) | |
| 566-778, gnl|hg17|chr6 (105927932-105928158) | |
| 566-778, gnl|Hg17|chr6 (105928148-105927936) | |
| 566-778, gnl|loxAfr1|scaffold_19275 (35308-35082) | |
| 566-778, gnl|mm7|chr10 (44908511-44908285) | |
| 566-778, gnl|Mm7|chr10 (44908293-44908505) | |
| 566-778, gnl|monDom2|scaffold_0 (116225696-116225464) | |
| 566-778, gnl|oryCun1|scaffold_200207 (78274-78048) | |
| 566-778, gnl|panTro1|chr5 (108068409-108068635) | |
| 566-778, gnl|rheMac2|chr4 (101385439-101385665) | |
| 566-778, gnl|rn3|chr20 (49079516-49079290) | |
| 566-778, gnl|tetNig1|chr14 (3798665-3798439) | |
| 566-778, gnl|xenTro1|scaffold_599 (802072-802274) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 301-440, gnl|bosTau2|chr9 (26197418-26197279) | |
| 301-440, gnl|Hg17|chr6 (105932089-105931952) | |
| 301-440, gnl|Mm7|chr10 (44904305-44904444) | |
| 566-778, gnl|bosTau2|chr9 (26193299-26193087) | |
| 566-778, gnl|canFam2|chr12 (65800890-65801116) | |
| 566-778, gnl|danRer3|chrNA (95012814-95013015) | |
| 566-778, gnl|dasNov1|scaffold_1323 (46340-46566) | |
| 566-778, gnl|echTel1|scaffold_315622 (47431-47657) | |
| 566-778, gnl|fr1|chrUn (266368886-266368660) | |
| 566-778, gnl|galGal2|chr3 (67109839-67109614) | |
| 566-778, gnl|hg17|chr6 (105927932-105928158) | |
| 566-778, gnl|Hg17|chr6 (105928148-105927936) | |
| 566-778, gnl|loxAfr1|scaffold_19275 (35308-35082) | |
| 566-778, gnl|mm7|chr10 (44908511-44908285) | |
| 566-778, gnl|Mm7|chr10 (44908293-44908505) | |
| 566-778, gnl|monDom2|scaffold_0 (116225696-116225464) | |
| 566-778, gnl|oryCun1|scaffold_200207 (78274-78048) | |
| 566-778, gnl|panTro1|chr5 (108068409-108068635) | |
| 566-778, gnl|rheMac2|chr4 (101385439-101385665) | |
| 566-778, gnl|rn3|chr20 (49079516-49079290) | |
| 566-778, gnl|tetNig1|chr14 (3798665-3798439) | |
| 566-778, gnl|xenTro1|scaffold_599 (802072-802274) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) | |
| ebs (0.118301) |