Ss1.1-Thy1-THY010058A04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAACAATTTACGCTTTACAGCGACTCAGACCTCAGCCCCAACATCTGTGTGCCGAAGCA AGGATTGCTGAGATGAACAGAGTGCTACATTTTGGAAGGTAACCACGTCCCAGGTCAAGC TGAGTCTGCCACAGATCCTCACGATGGTTCTAGAAGAAATCGCAGCAAGTCTGATGTGGT TTTCCTACGCCTTGATTCCTTGCTTGCTCACAGATGGAGTGGCTGTTCTGCCTGCCCCAC AGAACATCTCAGTGCAGTCAACCAACATGAAGCACGTCTTGACCTGGAGCCCAGTGATGG TGCCTGAAGAAATAGTATACTATTCTGTCGAGTACCAGGGAGAGTATGAGAGCCTATACA TGAGCCACATCTGGATCCCCAGCAGCTGGTGCTCACCCACCACAGGTCTTGAGTGTGACA TCACTGATGACATCACTGCCACTGTGCCATACAACCTCCGGGTCAGGGCCACGCTGGGCT CACAGACCTCGGCCTGGAGCACCCTGAAGCACCCCTTTAATCGAAATTCAACCACTCTCA TCCCACCTGGAATGGAGGTCACCAAGGATGGCTTCCACCTGGTTATTAAGCTGGAAGACC TGGGGCCCCAGTTTGAGTTCTTCGTGGCCTACTGGAGGAGGGAGCCTGGTGCCAAGGAAC ACGTCAAGGTGGTGAGGCCTGGGGGTATTCCAATGCACCTGGAAACCATGGAGCCAGGGG CCACATACTGCGTGAAAGCCCGGACATTTGTGAAGGCCATCGGGCGGTACAGTGCCTTCA GCCAGGCAGAGTGTGTCAAGGTGCAAGGAGAGAGCCTGCCCCTGGCACTGGCCCTGTTTG CATTTGTGGGCTTCATGCTCGTCCTCGTGGTTGTGCCGTTCTCCGTCTGGAAAATGGGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAACAATTTACGCTTTACAGCGACTCAGACCTCAGCCCCAACATCTGTGTGCCGAAGCA AGGATTGCTGAGATGAACAGAGTGCTACATTTTGGAAGGTAACCACGTCCCAGGTCAAGC TGAGTCTGCCACAGATCCTCACGATGGTTCTAGAAGAAATCGCAGCAAGTCTGATGTGGT TTTCCTACGCCTTGATTCCTTGCTTGCTCACAGATGGAGTGGCTGTTCTGCCTGCCCCAC AGAACATCTCAGTGCAGTCAACCAACATGAAGCACGTCTTGACCTGGAGCCCAGTGATGG TGCCTGAAGAAATAGTATACTATTCTGTCGAGTACCAGGGAGAGTATGAGAGCCTATACA TGAGCCACATCTGGATCCCCAGCAGCTGGTGCTCACCCACCACAGGTCTTGAGTGTGACA TCACTGATGACATCACTGCCACTGTGCCATACAACCTCCGGGTCAGGGCCACGCTGGGCT CACAGACCTCGGCCTGGAGCACCCTGAAGCACCCCTTTAATCGAAATTCAACCACTCTCA TCCCACCTGGAATGGAGGTCACCAAGGATGGCTTCCACCTGGTTATTAAGCTGGAAGACC TGGGGCCCCAGTTTGAGTTCTTCGTGGCCTACTGGAGGAGGGAGCCTGGTGCCAAGGAAC ACGTCAAGGTGGTGAGGCCTGGGGGTATTCCAATGCACCTGGAAACCATGGAGCCAGGGG CCACATACTGCGTGAAAGCCCGGACATTTGTGAAGGCCATCGGGCGGTACAGTGCCTTCA GCCAGGCAGAGTGTGTCAAGGTGCAAGGAGAGAGCCTGCCCCTGGCACTGGCCCTGTTTG CATTTGTGGGCTTCATGCTCGTCCTCGTGGTTGTGCCGTTCTCCGTCTGGAAAATGGGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 1-206, gnl|bosTau2|chr1 (85307689-85307478) | |
| 1-206, gnl|canFam2|chr23 (36437506-36438296) | |
| 1-206, gnl|dasNov1|scaffold_78716 (5-770) | |
| 1-206, gnl|echTel1|scaffold_255673 (3022-3723) | |
| 1-206, gnl|hg17|chr3 (138159305-138160071) | |
| 1-206, gnl|Hg17|chr3 (138159523-138159734) | |
| 1-206, gnl|loxAfr1|scaffold_46938 (221-981) | |
| 1-206, gnl|mm7|chr9 (100129688-100128964) | |
| 1-206, gnl|Mm7|chr9 (100129481-100129257) | |
| 1-206, gnl|panTro1|chr2 (140432590-140433351) | |
| 1-206, gnl|rheMac2|chr2 (150844866-150844100) | |
| 1-206, gnl|rn3|chr8 (105356965-105356233) | |
| 342-531, gnl|bosTau2|chr1 (85565376-85565565) | |
| 342-531, gnl|Hg17|chr3 (138183701-138183890) | |
| 342-531, gnl|Mm7|chr9 (100116181-100115992) | |
| 654-820, gnl|bosTau2|chr1 (85571927-85572095) | |
| 654-820, gnl|canFam2|chr23 (36463451-36463582) | |
| 654-820, gnl|dasNov1|scaffold_42966 (12577-12704) | |
| 654-820, gnl|echTel1|scaffold_324322 (45157-45281) | |
| 654-820, gnl|hg17|chr3 (138193533-138193664) | |
| 654-820, gnl|mm7|chr9 (100109304-100109173) | |
| 654-820, gnl|Mm7|chr9 (100109360-100109191) | |
| 654-820, gnl|monDom2|scaffold_24 (31790041-31790162) | |
| 654-820, gnl|panTro1|chr2 (140460637-140460768) | |
| 654-820, gnl|rheMac2|chr2 (150820720-150820589) | |
| 654-820, gnl|rn3|chr8 (105335564-105335433) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-206, gnl|bosTau2|chr1 (85307689-85307478) | |
| 1-206, gnl|canFam2|chr23 (36437506-36438296) | |
| 1-206, gnl|dasNov1|scaffold_78716 (5-770) | |
| 1-206, gnl|echTel1|scaffold_255673 (3022-3723) | |
| 1-206, gnl|hg17|chr3 (138159305-138160071) | |
| 1-206, gnl|Hg17|chr3 (138159523-138159734) | |
| 1-206, gnl|loxAfr1|scaffold_46938 (221-981) | |
| 1-206, gnl|mm7|chr9 (100129688-100128964) | |
| 1-206, gnl|Mm7|chr9 (100129481-100129257) | |
| 1-206, gnl|panTro1|chr2 (140432590-140433351) | |
| 1-206, gnl|rheMac2|chr2 (150844866-150844100) | |
| 1-206, gnl|rn3|chr8 (105356965-105356233) | |
| 342-531, gnl|bosTau2|chr1 (85565376-85565565) | |
| 342-531, gnl|Hg17|chr3 (138183701-138183890) | |
| 342-531, gnl|Mm7|chr9 (100116181-100115992) | |
| 654-820, gnl|bosTau2|chr1 (85571927-85572095) | |
| 654-820, gnl|canFam2|chr23 (36463451-36463582) | |
| 654-820, gnl|dasNov1|scaffold_42966 (12577-12704) | |
| 654-820, gnl|echTel1|scaffold_324322 (45157-45281) | |
| 654-820, gnl|hg17|chr3 (138193533-138193664) | |
| 654-820, gnl|mm7|chr9 (100109304-100109173) | |
| 654-820, gnl|Mm7|chr9 (100109360-100109191) | |
| 654-820, gnl|monDom2|scaffold_24 (31790041-31790162) | |
| 654-820, gnl|panTro1|chr2 (140460637-140460768) | |
| 654-820, gnl|rheMac2|chr2 (150820720-150820589) | |
| 654-820, gnl|rn3|chr8 (105335564-105335433) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |