Ss1.1-Thy1-THY010059C03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTTGTGGCCTCGGTGAATGAGGTTCTTCCTTCTTTGGTTCCTTCTGGCTTCCAATTTAG ATAGACGCCCGCGACCTGTTCCTCTTCCTGGCGTCGCCTCCACACTTCTGAGATGTCTGC GATTCCTGCAGAGGAGAGTGACCAGCTGCTGATCCGACCCCTTGGCGCTGGGCAAGAAGT GGGAAGATCCTGTATTATTCTGGAGTTCAAAGGAAGAAAGATAATGCTGGACTGTGGGAT CCACCCTGGCCTGGAAGGAATGGATGCTCTTCCTTATATCGATTTAATTGACCCAGCTGA GATCGATCTCCTGCTCATTAGTCATTTCCACTTGGATCACTGTGGAGCTTTGCCCTGGTT TCTGCAGAAGACGAGTTTCAAAGGAAGAACTTTTATGACACATGCCACCAAGGCTATTTA CAGATGGCTGCTTTCAGATTATGTCAAAGTGAGTAATATATCCGCTGACGACATGCTGTA TACCGAGACAGACTTGGAAGAGAGCATGGACAAAATTGAAACCATCAACTTCCACGAAGT GAAGGAGGTGGCCGGAATCAAGTTTTGGTGCTACCACGCCGGCCACGTGCTGGGAGCTGC CATGTTCATGATTGAGATCGCAGGCGTCAAGCTTTTGTATACAGGTGATTTCTCAAGACA AGAAGATAGACACTTAATGGCAGCTGAAATTCCTAACATTAAACCCGATATTCTTATCAT CGAATCTACTTACGGGACCCACATCCATGAGAAGCGAGAAGAGCGAGAAGCGAGATTCTG CAACACCGTTCATGATATTGTGAACAGAGGGGGCAGAGGCCTCATCCCTGTCTTTGCTCT TGGAAGGGCCCAGGAGCTTCTCCTGATTTTAGATGAGTACTGGCAGAATCACCCAGAACT CCACGACATTCCAATATACTACGCCTCCTCTCTGGCCAAGAAGTGTATGGCGGTGTACCA GACGTATGTCAACGCCATGAACGACAAAATCCGCAAGCAGATCAACATCAACAACCCCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTTGTGGCCTCGGTGAATGAGGTTCTTCCTTCTTTGGTTCCTTCTGGCTTCCAATTTAG ATAGACGCCCGCGACCTGTTCCTCTTCCTGGCGTCGCCTCCACACTTCTGAGATGTCTGC GATTCCTGCAGAGGAGAGTGACCAGCTGCTGATCCGACCCCTTGGCGCTGGGCAAGAAGT GGGAAGATCCTGTATTATTCTGGAGTTCAAAGGAAGAAAGATAATGCTGGACTGTGGGAT CCACCCTGGCCTGGAAGGAATGGATGCTCTTCCTTATATCGATTTAATTGACCCAGCTGA GATCGATCTCCTGCTCATTAGTCATTTCCACTTGGATCACTGTGGAGCTTTGCCCTGGTT TCTGCAGAAGACGAGTTTCAAAGGAAGAACTTTTATGACACATGCCACCAAGGCTATTTA CAGATGGCTGCTTTCAGATTATGTCAAAGTGAGTAATATATCCGCTGACGACATGCTGTA TACCGAGACAGACTTGGAAGAGAGCATGGACAAAATTGAAACCATCAACTTCCACGAAGT GAAGGAGGTGGCCGGAATCAAGTTTTGGTGCTACCACGCCGGCCACGTGCTGGGAGCTGC CATGTTCATGATTGAGATCGCAGGCGTCAAGCTTTTGTATACAGGTGATTTCTCAAGACA AGAAGATAGACACTTAATGGCAGCTGAAATTCCTAACATTAAACCCGATATTCTTATCAT CGAATCTACTTACGGGACCCACATCCATGAGAAGCGAGAAGAGCGAGAAGCGAGATTCTG CAACACCGTTCATGATATTGTGAACAGAGGGGGCAGAGGCCTCATCCCTGTCTTTGCTCT TGGAAGGGCCCAGGAGCTTCTCCTGATTTTAGATGAGTACTGGCAGAATCACCCAGAACT CCACGACATTCCAATATACTACGCCTCCTCTCTGGCCAAGAAGTGTATGGCGGTGTACCA GACGTATGTCAACGCCATGAACGACAAAATCCGCAAGCAGATCAACATCAACAACCCCTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 22-162, gnl|bosTau2|chr11 (69797195-69797336) | |
| 22-162, gnl|canFam2|chr17 (9510945-9511175) | |
| 22-162, gnl|dasNov1|scaffold_96947 (414-632) | |
| 22-162, gnl|echTel1|scaffold_286478 (100325-100540) | |
| 22-162, gnl|hg17|chr2 (9514273-9514507) | |
| 22-162, gnl|Hg17|chr2 (9514405-9514550) | |
| 22-162, gnl|loxAfr1|scaffold_265 (7943-7716) | |
| 22-162, gnl|mm7|chr12 (19645678-19645906) | |
| 22-162, gnl|Mm7|chr12 (19645807-19645949) | |
| 22-162, gnl|monDom2|scaffold_1 (127157845-127158100) | |
| 22-162, gnl|oryCun1|scaffold_173095 (68852-69087) | |
| 22-162, gnl|panTro1|chr12 (10159412-10159646) | |
| 22-162, gnl|rheMac2|chr13 (9518473-9518696) | |
| 22-162, gnl|rn3|chr6 (41847970-41848197) | |
| 446-631, gnl|bosTau2|chr11 (69806007-69806192) | |
| 446-631, gnl|Hg17|chr2 (9523230-9523415) | |
| 446-631, gnl|Mm7|chr12 (19654427-19654612) | |
| 870-1020, gnl|bosTau2|chr11 (69811540-69811690) | |
| 870-1020, gnl|canFam2|chr17 (9528070-9528257) | |
| 870-1020, gnl|danRer3|chr20 (36752294-36752481) | |
| 870-1020, gnl|dasNov1|scaffold_36561 (3286-3097) | |
| 870-1020, gnl|echTel1|scaffold_286478 (118423-118612) | |
| 870-1020, gnl|fr1|chrUn (134371929-134371742) | |
| 870-1020, gnl|galGal2|chr3 (94460727-94460914) | |
| 870-1020, gnl|hg17|chr2 (9531213-9531400) | |
| 870-1020, gnl|Hg17|chr2 (9531215-9531365) | |
| 870-1020, gnl|loxAfr1|scaffold_3572 (75970-75781) | |
| 870-1020, gnl|mm7|chr12 (19659442-19659628) | |
| 870-1020, gnl|Mm7|chr12 (19659444-19659594) | |
| 870-1020, gnl|monDom2|scaffold_1 (127181245-127181434) | |
| 870-1020, gnl|panTro1|chr12 (10176340-10176527) | |
| 870-1020, gnl|rn3|chr6 (41862264-41862450) | |
| 870-1020, gnl|tetNig1|chr10 (5910042-5909858) | |
| 870-1020, gnl|xenTro1|scaffold_86 (57705-57518) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 22-162, gnl|bosTau2|chr11 (69797195-69797336) | |
| 22-162, gnl|canFam2|chr17 (9510945-9511175) | |
| 22-162, gnl|dasNov1|scaffold_96947 (414-632) | |
| 22-162, gnl|echTel1|scaffold_286478 (100325-100540) | |
| 22-162, gnl|hg17|chr2 (9514273-9514507) | |
| 22-162, gnl|Hg17|chr2 (9514405-9514550) | |
| 22-162, gnl|loxAfr1|scaffold_265 (7943-7716) | |
| 22-162, gnl|mm7|chr12 (19645678-19645906) | |
| 22-162, gnl|Mm7|chr12 (19645807-19645949) | |
| 22-162, gnl|monDom2|scaffold_1 (127157845-127158100) | |
| 22-162, gnl|oryCun1|scaffold_173095 (68852-69087) | |
| 22-162, gnl|panTro1|chr12 (10159412-10159646) | |
| 22-162, gnl|rheMac2|chr13 (9518473-9518696) | |
| 22-162, gnl|rn3|chr6 (41847970-41848197) | |
| 446-631, gnl|bosTau2|chr11 (69806007-69806192) | |
| 446-631, gnl|Hg17|chr2 (9523230-9523415) | |
| 446-631, gnl|Mm7|chr12 (19654427-19654612) | |
| 870-1020, gnl|bosTau2|chr11 (69811540-69811690) | |
| 870-1020, gnl|canFam2|chr17 (9528070-9528257) | |
| 870-1020, gnl|danRer3|chr20 (36752294-36752481) | |
| 870-1020, gnl|dasNov1|scaffold_36561 (3286-3097) | |
| 870-1020, gnl|echTel1|scaffold_286478 (118423-118612) | |
| 870-1020, gnl|fr1|chrUn (134371929-134371742) | |
| 870-1020, gnl|galGal2|chr3 (94460727-94460914) | |
| 870-1020, gnl|hg17|chr2 (9531213-9531400) | |
| 870-1020, gnl|Hg17|chr2 (9531215-9531365) | |
| 870-1020, gnl|loxAfr1|scaffold_3572 (75970-75781) | |
| 870-1020, gnl|mm7|chr12 (19659442-19659628) | |
| 870-1020, gnl|Mm7|chr12 (19659444-19659594) | |
| 870-1020, gnl|monDom2|scaffold_1 (127181245-127181434) | |
| 870-1020, gnl|panTro1|chr12 (10176340-10176527) | |
| 870-1020, gnl|rn3|chr6 (41862264-41862450) | |
| 870-1020, gnl|tetNig1|chr10 (5910042-5909858) | |
| 870-1020, gnl|xenTro1|scaffold_86 (57705-57518) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| cki (0.165235) |