Ss1.1-Thy1-THY010060B02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAACGAATGGCCGAGGGCAGTCTGCGCGCGTCGAGATTGGCTGACGCAGCTTCGAGGGA GGGCGGAAGGCACGTCGCAGACTCCTCCCTGAGGTAGTCTGCTCTGAGGGGCGGCGAAGC CCGACCGCGGCCTCTCTGGTCGAGGGGGAGAACCGTCATCTGGTTAAATCTCGTCCTTTC CCCAGAGTTCCTTTAATTCTGCTGGAGTCTTCGTTTGTGTCTGACCCCTACCTACTTCTC TTCCTCCCGAAGGCACGTCGCAGACTCCTCCCTGAGGGAGACCTCGGAGAACATGGCTGA GGGGGGAAGACCTGGCTCAGGACCCAGTTTTAGGTCCAATCATAGGAAGATACTAAACCT GCTCCTGGAGAGAGAGACTTCCTTTTCCATGAGTTCTGATCGCCCTGGAACTCCACTGAA GAAGAAACTTTTTGGCGATTCTGCAAACCTCAGCATTTTATCCGGAGGAACCCCAAAACG TTGCCTTGATCTTTCGAATCTTAGCAGCGGGGAGATGTCTGCCACTCAGTTTACCACTTC TGCAGACCTCGATGAAACTGGTCACTTGGATTCCACAGGATCTGAAGAAATACAGTTAGC TGGAATGAGTTATCACCAACACCTTTTAAAATGCAGCCCAGCACAGCTGCTTTGTAGCAC TCCAAATGCCTTGGACCATGGCCGCAGGAAGAAAGATGCAATATGTAGCTCATCCGAAAA TAAAGAAAATGAAAACAACACTTCAAAGCCCTTGGAATGGTGGGCACACAGGAACCTGCT GTTTCAGAAGAGACCAGGGGGACCTTACATGTCTCCTCTTTCTCTATTGGACAATGGAAA CTTGGTGGAAGGTGAAATGAAACATCTGGGCAGTCCCATTACTGCAGTTTCAAAATTAGA TAAAAATCCAGAGCGAGGAGAAGACCAAGCAGAGGAGATTTCGGATGAATTGATGGAGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAACGAATGGCCGAGGGCAGTCTGCGCGCGTCGAGATTGGCTGACGCAGCTTCGAGGGA GGGCGGAAGGCACGTCGCAGACTCCTCCCTGAGGTAGTCTGCTCTGAGGGGCGGCGAAGC CCGACCGCGGCCTCTCTGGTCGAGGGGGAGAACCGTCATCTGGTTAAATCTCGTCCTTTC CCCAGAGTTCCTTTAATTCTGCTGGAGTCTTCGTTTGTGTCTGACCCCTACCTACTTCTC TTCCTCCCGAAGGCACGTCGCAGACTCCTCCCTGAGGGAGACCTCGGAGAACATGGCTGA GGGGGGAAGACCTGGCTCAGGACCCAGTTTTAGGTCCAATCATAGGAAGATACTAAACCT GCTCCTGGAGAGAGAGACTTCCTTTTCCATGAGTTCTGATCGCCCTGGAACTCCACTGAA GAAGAAACTTTTTGGCGATTCTGCAAACCTCAGCATTTTATCCGGAGGAACCCCAAAACG TTGCCTTGATCTTTCGAATCTTAGCAGCGGGGAGATGTCTGCCACTCAGTTTACCACTTC TGCAGACCTCGATGAAACTGGTCACTTGGATTCCACAGGATCTGAAGAAATACAGTTAGC TGGAATGAGTTATCACCAACACCTTTTAAAATGCAGCCCAGCACAGCTGCTTTGTAGCAC TCCAAATGCCTTGGACCATGGCCGCAGGAAGAAAGATGCAATATGTAGCTCATCCGAAAA TAAAGAAAATGAAAACAACACTTCAAAGCCCTTGGAATGGTGGGCACACAGGAACCTGCT GTTTCAGAAGAGACCAGGGGGACCTTACATGTCTCCTCTTTCTCTATTGGACAATGGAAA CTTGGTGGAAGGTGAAATGAAACATCTGGGCAGTCCCATTACTGCAGTTTCAAAATTAGA TAAAAATCCAGAGCGAGGAGAAGACCAAGCAGAGGAGATTTCGGATGAATTGATGGAGTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 99-284, gnl|bosTau2|chr7 (34840834-34840648) | |
| 99-284, gnl|canFam2|chr11 (28952179-28952520) | |
| 99-284, gnl|dasNov1|scaffold_39839 (6070-6417) | |
| 99-284, gnl|echTel1|scaffold_323134 (8569-8245) | |
| 99-284, gnl|hg17|chr5 (137695037-137695396) | |
| 99-284, gnl|Hg17|chr5 (137695364-137695175) | |
| 99-284, gnl|loxAfr1|scaffold_16120 (7-347) | |
| 99-284, gnl|mm7|chr18 (35127057-35127402) | |
| 99-284, gnl|Mm7|chr18 (35127382-35127174) | |
| 99-284, gnl|oryCun1|scaffold_213143 (111053-111367) | |
| 99-284, gnl|panTro1|chr4 (144300217-144300576) | |
| 99-284, gnl|rheMac2|chr6 (134746059-134746414) | |
| 99-284, gnl|rn3|chr18 (27252180-27252482) | |
| 299-465, gnl|bosTau2|chr7 (34840035-34839869) | |
| 299-465, gnl|canFam2|chr11 (28951157-28951467) | |
| 299-465, gnl|dasNov1|scaffold_39839 (5553-5855) | |
| 299-465, gnl|echTel1|scaffold_323134 (9012-8707) | |
| 299-465, gnl|hg17|chr5 (137694563-137694869) | |
| 299-465, gnl|Hg17|chr5 (137694738-137694575) | |
| 299-465, gnl|mm7|chr18 (35126594-35126875) | |
| 299-465, gnl|Mm7|chr18 (35126766-35126606) | |
| 299-465, gnl|monDom2|scaffold_6 (71086393-71086100) | |
| 299-465, gnl|oryCun1|scaffold_213143 (110551-110845) | |
| 299-465, gnl|panTro1|chr4 (144299743-144300049) | |
| 299-465, gnl|rheMac2|chr6 (134745585-134745891) | |
| 299-465, gnl|rn3|chr18 (27251716-27251995) | |
| 822-960, gnl|bosTau2|chr7 (34832186-34832048) | |
| 822-960, gnl|canFam2|chr11 (28941850-28942067) | |
| 822-960, gnl|echTel1|scaffold_235829 (3822-4021) | |
| 822-960, gnl|hg17|chr5 (137682796-137682998) | |
| 822-960, gnl|Hg17|chr5 (137682970-137682832) | |
| 822-960, gnl|loxAfr1|scaffold_44032 (4018-3824) | |
| 822-960, gnl|mm7|chr18 (35119795-35119967) | |
| 822-960, gnl|monDom2|scaffold_6 (71093583-71093383) | |
| 822-960, gnl|oryCun1|scaffold_213143 (103991-104196) | |
| 822-960, gnl|panTro1|chr4 (144285455-144285657) | |
| 822-960, gnl|rheMac2|chr6 (134732225-134732424) | |
| 822-960, gnl|rn3|chr18 (27241626-27241813) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 99-284, gnl|bosTau2|chr7 (34840834-34840648) | |
| 99-284, gnl|canFam2|chr11 (28952179-28952520) | |
| 99-284, gnl|dasNov1|scaffold_39839 (6070-6417) | |
| 99-284, gnl|echTel1|scaffold_323134 (8569-8245) | |
| 99-284, gnl|hg17|chr5 (137695037-137695396) | |
| 99-284, gnl|Hg17|chr5 (137695364-137695175) | |
| 99-284, gnl|loxAfr1|scaffold_16120 (7-347) | |
| 99-284, gnl|mm7|chr18 (35127057-35127402) | |
| 99-284, gnl|Mm7|chr18 (35127382-35127174) | |
| 99-284, gnl|oryCun1|scaffold_213143 (111053-111367) | |
| 99-284, gnl|panTro1|chr4 (144300217-144300576) | |
| 99-284, gnl|rheMac2|chr6 (134746059-134746414) | |
| 99-284, gnl|rn3|chr18 (27252180-27252482) | |
| 299-465, gnl|bosTau2|chr7 (34840035-34839869) | |
| 299-465, gnl|canFam2|chr11 (28951157-28951467) | |
| 299-465, gnl|dasNov1|scaffold_39839 (5553-5855) | |
| 299-465, gnl|echTel1|scaffold_323134 (9012-8707) | |
| 299-465, gnl|hg17|chr5 (137694563-137694869) | |
| 299-465, gnl|Hg17|chr5 (137694738-137694575) | |
| 299-465, gnl|mm7|chr18 (35126594-35126875) | |
| 299-465, gnl|Mm7|chr18 (35126766-35126606) | |
| 299-465, gnl|monDom2|scaffold_6 (71086393-71086100) | |
| 299-465, gnl|oryCun1|scaffold_213143 (110551-110845) | |
| 299-465, gnl|panTro1|chr4 (144299743-144300049) | |
| 299-465, gnl|rheMac2|chr6 (134745585-134745891) | |
| 299-465, gnl|rn3|chr18 (27251716-27251995) | |
| 822-960, gnl|bosTau2|chr7 (34832186-34832048) | |
| 822-960, gnl|canFam2|chr11 (28941850-28942067) | |
| 822-960, gnl|echTel1|scaffold_235829 (3822-4021) | |
| 822-960, gnl|hg17|chr5 (137682796-137682998) | |
| 822-960, gnl|Hg17|chr5 (137682970-137682832) | |
| 822-960, gnl|loxAfr1|scaffold_44032 (4018-3824) | |
| 822-960, gnl|mm7|chr18 (35119795-35119967) | |
| 822-960, gnl|monDom2|scaffold_6 (71093583-71093383) | |
| 822-960, gnl|oryCun1|scaffold_213143 (103991-104196) | |
| 822-960, gnl|panTro1|chr4 (144285455-144285657) | |
| 822-960, gnl|rheMac2|chr6 (134732225-134732424) | |
| 822-960, gnl|rn3|chr18 (27241626-27241813) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) |