Ss1.1-Thy1-THY010060G11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGACTTTACCGAGGACGTCAATTCCGCTTTTGAGTTCCTGCTCGAAGCTCACGCCCTTG CTGGACAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAATTTCCTGCTCCAAGAATGT AGCAAGCAGGGGCTTCTGTCTGAAGCTAGCATGAACAACCTCATGGCCAAGCGCAAAGCA GACCGGGAGCACGCACCCCAGCTGAAATCCGATGAAAACGCCAACATCCAGCCCAACCCC GGGCTCATCCTCCGTGCGGAGCCCACCGTCACCAACATCCTTAAAACCATGGATGCAGAC CACTCCAAGTCCCCAGAGGGGCTGCTGGGGGTCCTGGGCCACATGCTGTCCGGGAAGAGC CTCGACTTGCTGCTGGCCGCTGCCGCCGCCACTGGGAAGCTTAAGTCCTTCGCCCGGAAA TTCATCAATTTGAATGAATTCACGACACACGGCAGCGAAGAAAGCACCAAAGCGGCCTCG GTTCGAGCCCTGCTCTTTGACATCTCCTTCCTCATGCTGTGCCACGTGGCCCAGACCTAT GGCTCGGAGGTGATCCTGTCCGACTCGAGCACAGGAGCAGAGGTGTTCTTCTTTGAGACC TGGATGCAGACGTGCATGCCTGAGGAGGGCAAAATCCTGAACCCTGACCACCCCTGCTTC CGGCCCGACTCCACCAAAGTGGAGTCCCTGGTGGCTCTGCTCAACAACTTCTCCGAGATG AAGCTGGTGCAGATGAAGTGGAACGAAGCCTGTCTCAGCATTTCGGCGGCCATCCTGGAA ATCCTCAACGCCTGGGAGAACGGGGTCCTGGCCTTCGAGTCCATCCAGAAAATCACAGAT AACATCAAGGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGACTTTACCGAGGACGTCAATTCCGCTTTTGAGTTCCTGCTCGAAGCTCACGCCCTTG CTGGACAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAATTTCCTGCTCCAAGAATGT AGCAAGCAGGGGCTTCTGTCTGAAGCTAGCATGAACAACCTCATGGCCAAGCGCAAAGCA GACCGGGAGCACGCACCCCAGCTGAAATCCGATGAAAACGCCAACATCCAGCCCAACCCC GGGCTCATCCTCCGTGCGGAGCCCACCGTCACCAACATCCTTAAAACCATGGATGCAGAC CACTCCAAGTCCCCAGAGGGGCTGCTGGGGGTCCTGGGCCACATGCTGTCCGGGAAGAGC CTCGACTTGCTGCTGGCCGCTGCCGCCGCCACTGGGAAGCTTAAGTCCTTCGCCCGGAAA TTCATCAATTTGAATGAATTCACGACACACGGCAGCGAAGAAAGCACCAAAGCGGCCTCG GTTCGAGCCCTGCTCTTTGACATCTCCTTCCTCATGCTGTGCCACGTGGCCCAGACCTAT GGCTCGGAGGTGATCCTGTCCGACTCGAGCACAGGAGCAGAGGTGTTCTTCTTTGAGACC TGGATGCAGACGTGCATGCCTGAGGAGGGCAAAATCCTGAACCCTGACCACCCCTGCTTC CGGCCCGACTCCACCAAAGTGGAGTCCCTGGTGGCTCTGCTCAACAACTTCTCCGAGATG AAGCTGGTGCAGATGAAGTGGAACGAAGCCTGTCTCAGCATTTCGGCGGCCATCCTGGAA ATCCTCAACGCCTGGGAGAACGGGGTCCTGGCCTTCGAGTCCATCCAGAAAATCACAGAT AACATCAAGGGG |
| Aligned organism(s): 56 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
| 173-285, gnl|bosTau2|chr19 (34557287-34557399) | |
| 173-285, gnl|canFam2|chr9 (25846385-25846256) | |
| 173-285, gnl|danRer3|chr23 (14740158-14740274) | |
| 173-285, gnl|dasNov1|scaffold_77541 (313-184) | |
| 173-285, gnl|echTel1|scaffold_322583 (46633-46762) | |
| 173-285, gnl|fr1|chrUn (145546454-145546331) | |
| 173-285, gnl|galGal2|chrUn (131903707-131903833) | |
| 173-285, gnl|hg17|chr17 (35439513-35439642) | |
| 173-285, gnl|Hg17|chr17 (35439639-35439527) | |
| 173-285, gnl|loxAfr1|scaffold_22587 (37247-37336) | |
| 173-285, gnl|mm7|chr11 (98822175-98822302) | |
| 173-285, gnl|Mm7|chr11 (98822299-98822193) | |
| 173-285, gnl|monDom2|scaffold_18 (49271450-49271575) | |
| 173-285, gnl|panTro1|chr19 (38678092-38678221) | |
| 173-285, gnl|rheMac2|chr16 (50129125-50129254) | |
| 173-285, gnl|rn3|chr10 (87500200-87500325) | |
| 173-285, gnl|tetNig1|chr2 (4500534-4500650) | |
| 173-285, gnl|xenTro1|scaffold_343 (14729-14611) | |
| 286-428, gnl|bosTau2|chr19 (34557876-34558018) | |
| 286-428, gnl|canFam2|chr9 (25847026-25846868) | |
| 286-428, gnl|danRer3|chr23 (14805534-14805376) | |
| 286-428, gnl|dasNov1|scaffold_77541 (943-785) | |
| 286-428, gnl|echTel1|scaffold_322583 (45955-46113) | |
| 286-428, gnl|fr1|chrUn (145546782-145546633) | |
| 286-428, gnl|galGal2|chrUn (131903004-131903158) | |
| 286-428, gnl|hg17|chr17 (35438597-35438755) | |
| 286-428, gnl|Hg17|chr17 (35438747-35438605) | |
| 286-428, gnl|loxAfr1|scaffold_22587 (36614-36772) | |
| 286-428, gnl|mm7|chr11 (98821564-98821721) | |
| 286-428, gnl|Mm7|chr11 (98821714-98821572) | |
| 286-428, gnl|monDom2|scaffold_18 (49271095-49271258) | |
| 286-428, gnl|oryCun1|scaffold_199304 (3596-3754) | |
| 286-428, gnl|panTro1|chr19 (38677176-38677334) | |
| 286-428, gnl|rheMac2|chr16 (50128204-50128362) | |
| 286-428, gnl|rn3|chr10 (87499565-87499722) | |
| 286-428, gnl|tetNig1|chr2 (4500219-4500371) | |
| 286-428, gnl|xenTro1|scaffold_343 (15669-15515) | |
| 548-729, gnl|bosTau2|chr19 (34559411-34559592) | |
| 548-729, gnl|canFam2|chr9 (25849341-25849119) | |
| 548-729, gnl|danRer3|chr23 (14806394-14806174) | |
| 548-729, gnl|dasNov1|scaffold_77541 (2811-2594) | |
| 548-729, gnl|echTel1|scaffold_322583 (44327-44544) | |
| 548-729, gnl|fr1|chrUn (145547466-145547275) | |
| 548-729, gnl|galGal2|chrUn (131900164-131900407) | |
| 548-729, gnl|hg17|chr17 (35436628-35436847) | |
| 548-729, gnl|Hg17|chr17 (35436815-35436634) | |
| 548-729, gnl|loxAfr1|scaffold_22587 (34897-35119) | |
| 548-729, gnl|mm7|chr11 (98819307-98819524) | |
| 548-729, gnl|Mm7|chr11 (98819494-98819313) | |
| 548-729, gnl|monDom2|scaffold_18 (49268680-49268892) | |
| 548-729, gnl|oryCun1|scaffold_199304 (611-814) | |
| 548-729, gnl|panTro1|chr19 (38675208-38675427) | |
| 548-729, gnl|rheMac2|chr16 (50125933-50126152) | |
| 548-729, gnl|rn3|chr10 (87497589-87497801) | |
| 548-729, gnl|tetNig1|chr2 (4499540-4499729) | |
| 548-729, gnl|xenTro1|scaffold_343 (19029-18821) |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 173-285, gnl|bosTau2|chr19 (34557287-34557399) | |
| 173-285, gnl|canFam2|chr9 (25846385-25846256) | |
| 173-285, gnl|danRer3|chr23 (14740158-14740274) | |
| 173-285, gnl|dasNov1|scaffold_77541 (313-184) | |
| 173-285, gnl|echTel1|scaffold_322583 (46633-46762) | |
| 173-285, gnl|fr1|chrUn (145546454-145546331) | |
| 173-285, gnl|galGal2|chrUn (131903707-131903833) | |
| 173-285, gnl|hg17|chr17 (35439513-35439642) | |
| 173-285, gnl|Hg17|chr17 (35439639-35439527) | |
| 173-285, gnl|loxAfr1|scaffold_22587 (37247-37336) | |
| 173-285, gnl|mm7|chr11 (98822175-98822302) | |
| 173-285, gnl|Mm7|chr11 (98822299-98822193) | |
| 173-285, gnl|monDom2|scaffold_18 (49271450-49271575) | |
| 173-285, gnl|panTro1|chr19 (38678092-38678221) | |
| 173-285, gnl|rheMac2|chr16 (50129125-50129254) | |
| 173-285, gnl|rn3|chr10 (87500200-87500325) | |
| 173-285, gnl|tetNig1|chr2 (4500534-4500650) | |
| 173-285, gnl|xenTro1|scaffold_343 (14729-14611) | |
| 286-428, gnl|bosTau2|chr19 (34557876-34558018) | |
| 286-428, gnl|canFam2|chr9 (25847026-25846868) | |
| 286-428, gnl|danRer3|chr23 (14805534-14805376) | |
| 286-428, gnl|dasNov1|scaffold_77541 (943-785) | |
| 286-428, gnl|echTel1|scaffold_322583 (45955-46113) | |
| 286-428, gnl|fr1|chrUn (145546782-145546633) | |
| 286-428, gnl|galGal2|chrUn (131903004-131903158) | |
| 286-428, gnl|hg17|chr17 (35438597-35438755) | |
| 286-428, gnl|Hg17|chr17 (35438747-35438605) | |
| 286-428, gnl|loxAfr1|scaffold_22587 (36614-36772) | |
| 286-428, gnl|mm7|chr11 (98821564-98821721) | |
| 286-428, gnl|Mm7|chr11 (98821714-98821572) | |
| 286-428, gnl|monDom2|scaffold_18 (49271095-49271258) | |
| 286-428, gnl|oryCun1|scaffold_199304 (3596-3754) | |
| 286-428, gnl|panTro1|chr19 (38677176-38677334) | |
| 286-428, gnl|rheMac2|chr16 (50128204-50128362) | |
| 286-428, gnl|rn3|chr10 (87499565-87499722) | |
| 286-428, gnl|tetNig1|chr2 (4500219-4500371) | |
| 286-428, gnl|xenTro1|scaffold_343 (15669-15515) | |
| 548-729, gnl|bosTau2|chr19 (34559411-34559592) | |
| 548-729, gnl|canFam2|chr9 (25849341-25849119) | |
| 548-729, gnl|danRer3|chr23 (14806394-14806174) | |
| 548-729, gnl|dasNov1|scaffold_77541 (2811-2594) | |
| 548-729, gnl|echTel1|scaffold_322583 (44327-44544) | |
| 548-729, gnl|fr1|chrUn (145547466-145547275) | |
| 548-729, gnl|galGal2|chrUn (131900164-131900407) | |
| 548-729, gnl|hg17|chr17 (35436628-35436847) | |
| 548-729, gnl|Hg17|chr17 (35436815-35436634) | |
| 548-729, gnl|loxAfr1|scaffold_22587 (34897-35119) | |
| 548-729, gnl|mm7|chr11 (98819307-98819524) | |
| 548-729, gnl|Mm7|chr11 (98819494-98819313) | |
| 548-729, gnl|monDom2|scaffold_18 (49268680-49268892) | |
| 548-729, gnl|oryCun1|scaffold_199304 (611-814) | |
| 548-729, gnl|panTro1|chr19 (38675208-38675427) | |
| 548-729, gnl|rheMac2|chr16 (50125933-50126152) | |
| 548-729, gnl|rn3|chr10 (87497589-87497801) | |
| 548-729, gnl|tetNig1|chr2 (4499540-4499729) | |
| 548-729, gnl|xenTro1|scaffold_343 (19029-18821) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |