Ss1.1-Thy1-THY010061E10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTCCCGCGCTCCTATTTTTATAATAGTGATGGCTTCAAGGGAAACTGTGGCCGGCTCG CTCGGAAGAGACAGCGCGAGCCACCAGCCGGGTAGGCCGGTCCACGTCCGCCGCGCAGAA CTCTGCCGCGAAGAGCGGTCGCGTCTGGAAACTACCTGGCCGATGAATGGGGGATGTGGC CCCCCATGGCTCGCGGGGCTCGCAACTCTTTCTCTCCCTTCAGAACCTTATCTTGGCTTT GGATCTCAGAAGAGAACCACTAAGCAGAGACCAGACTCAGTGAGTGAGCAGGTGTTTTGG ACAATGGACTGGTGGAGCCCATCCCTATTATAAAAATGTCTCAGAGCAACCGGGAGCTGG TGGTTGACTTTCTCTCCTACAAGCTTTCCCAGAAAGGATACAGCTGGAGTCAGTTTACTG ATGTGGAAGAGAACAGAACTGAGGCCCCAGAAGGGACTGAATCAGAAGCGGAAACCCCTA GTGCCATCAATGGCAACCCATCCTGGCACCTGGCGGACAGCCCCGCGGTGAATGGAGCCA CTGGCCACAGCAGCAGCTTGGATGCCCGGGAGGTGATCCCCATGGCTGCAGTGAAGCAAG CGCTGAGGGAGGCGGGCGATGAGTTTGAACTGAGGTACCGGAGGGCATTCAGTGACCTGA CGTCCCAGCTCCACATCACCCCAGGGACAGCGTATCAGAGCTTTGAGCAGGTAGTGAACG AACTCTTCCGGGATGGGGTGAACTGGGGTCGCATTGTGGCCTTTTTCTCCTTCGGTGGGG CACTGTGCGTGGAGAGCGTAGACAAGGAGATGCAGGTATGGGTGAGTCGGATCGCAACTT GGATGGCCACTTACCTGAATGACCACCTAGAGCCTGGGATCCAGGAGAACGGCGGCTGGG ACACTTTGGTGGAACTCTACGGAAACAATGCAGCAGCTGAGAGCCGGAAGGGCCAGGAGC GCTTCAACCGATGGTTCCTGACGGGCATGACTCTAGCTGGGGTGGTTCTGCTGGGTTCGC TCTTCAGTCGGAAATGACCAGACACTGACCACCTACTCACCTTCTCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTCCCGCGCTCCTATTTTTATAATAGTGATGGCTTCAAGGGAAACTGTGGCCGGCTCG CTCGGAAGAGACAGCGCGAGCCACCAGCCGGGTAGGCCGGTCCACGTCCGCCGCGCAGAA CTCTGCCGCGAAGAGCGGTCGCGTCTGGAAACTACCTGGCCGATGAATGGGGGATGTGGC CCCCCATGGCTCGCGGGGCTCGCAACTCTTTCTCTCCCTTCAGAACCTTATCTTGGCTTT GGATCTCAGAAGAGAACCACTAAGCAGAGACCAGACTCAGTGAGTGAGCAGGTGTTTTGG ACAATGGACTGGTGGAGCCCATCCCTATTATAAAAATGTCTCAGAGCAACCGGGAGCTGG TGGTTGACTTTCTCTCCTACAAGCTTTCCCAGAAAGGATACAGCTGGAGTCAGTTTACTG ATGTGGAAGAGAACAGAACTGAGGCCCCAGAAGGGACTGAATCAGAAGCGGAAACCCCTA GTGCCATCAATGGCAACCCATCCTGGCACCTGGCGGACAGCCCCGCGGTGAATGGAGCCA CTGGCCACAGCAGCAGCTTGGATGCCCGGGAGGTGATCCCCATGGCTGCAGTGAAGCAAG CGCTGAGGGAGGCGGGCGATGAGTTTGAACTGAGGTACCGGAGGGCATTCAGTGACCTGA CGTCCCAGCTCCACATCACCCCAGGGACAGCGTATCAGAGCTTTGAGCAGGTAGTGAACG AACTCTTCCGGGATGGGGTGAACTGGGGTCGCATTGTGGCCTTTTTCTCCTTCGGTGGGG CACTGTGCGTGGAGAGCGTAGACAAGGAGATGCAGGTATGGGTGAGTCGGATCGCAACTT GGATGGCCACTTACCTGAATGACCACCTAGAGCCTGGGATCCAGGAGAACGGCGGCTGGG ACACTTTGGTGGAACTCTACGGAAACAATGCAGCAGCTGAGAGCCGGAAGGGCCAGGAGC GCTTCAACCGATGGTTCCTGACGGGCATGACTCTAGCTGGGGTGGTTCTGCTGGGTTCGC TCTTCAGTCGGAAATGACCAGACACTGACCACCTACTCACCTTCTCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 35-204, gnl|bosTau2|chr13 (43944702-43944534) | |
| 35-204, gnl|canFam2|chr24 (24166828-24167302) | |
| 35-204, gnl|dasNov1|scaffold_19769 (20495-20964) | |
| 35-204, gnl|echTel1|scaffold_127379 (4-459) | |
| 35-204, gnl|hg17|chr20 (29775085-29775565) | |
| 35-204, gnl|Hg17|chr20 (29775384-29775200) | |
| 35-204, gnl|loxAfr1|scaffold_11129 (20925-20465) | |
| 35-204, gnl|mm7|chr2 (152572232-152572694) | |
| 35-204, gnl|Mm7|chr2 (152572516-152572346) | |
| 35-204, gnl|monDom2|scaffold_38 (1403738-1403202) | |
| 35-204, gnl|oryCun1|scaffold_210023 (192874-193338) | |
| 35-204, gnl|panTro1|chr21 (31475841-31476321) | |
| 35-204, gnl|rheMac2|chr10 (32849191-32848711) | |
| 35-204, gnl|rn3|chr3 (143085529-143085989) | |
| 289-1026, gnl|bosTau2|chr11 (8001499-8000763) | |
| 289-1026, gnl|Hg17|chr20 (29773729-29773118) | |
| 289-1026, gnl|Mm7|chr2 (152570894-152570283) | |
| 597-900, gnl|bosTau2|chr10 (13808687-13808384) | |
| 597-900, gnl|canFam2|chr8 (6573573-6573909) | |
| 597-900, gnl|danRer3|chr2 (5696079-5696433) | |
| 597-900, gnl|dasNov1|scaffold_39571 (10043-9707) | |
| 597-900, gnl|echTel1|scaffold_237097 (3423-3731) | |
| 597-900, gnl|fr1|chrUn (4138932-4139264) | |
| 597-900, gnl|galGal2|chr20 (9602094-9601759) | |
| 597-900, gnl|hg17|chr14 (22846928-22847264) | |
| 597-900, gnl|Hg17|chr14 (22846946-22847249) | |
| 597-900, gnl|loxAfr1|scaffold_80176 (9046-8709) | |
| 597-900, gnl|mm7|chr14 (49751427-49751762) | |
| 597-900, gnl|Mm7|chr14 (49751445-49751748) | |
| 597-900, gnl|monDom2|scaffold_12 (26409952-26409616) | |
| 597-900, gnl|oryCun1|scaffold_206763 (36555-36891) | |
| 597-900, gnl|panTro1|chr15 (21819379-21819715) | |
| 597-900, gnl|rheMac2|chr7 (86147940-86148276) | |
| 597-900, gnl|rn3|chr15 (32999922-33000258) | |
| 597-900, gnl|tetNig1|chrUn_random (109072065-109071759) | |
| 597-900, gnl|xenTro1|scaffold_53 (171726-171390) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 35-204, gnl|bosTau2|chr13 (43944702-43944534) | |
| 35-204, gnl|canFam2|chr24 (24166828-24167302) | |
| 35-204, gnl|dasNov1|scaffold_19769 (20495-20964) | |
| 35-204, gnl|echTel1|scaffold_127379 (4-459) | |
| 35-204, gnl|hg17|chr20 (29775085-29775565) | |
| 35-204, gnl|Hg17|chr20 (29775384-29775200) | |
| 35-204, gnl|loxAfr1|scaffold_11129 (20925-20465) | |
| 35-204, gnl|mm7|chr2 (152572232-152572694) | |
| 35-204, gnl|Mm7|chr2 (152572516-152572346) | |
| 35-204, gnl|monDom2|scaffold_38 (1403738-1403202) | |
| 35-204, gnl|oryCun1|scaffold_210023 (192874-193338) | |
| 35-204, gnl|panTro1|chr21 (31475841-31476321) | |
| 35-204, gnl|rheMac2|chr10 (32849191-32848711) | |
| 35-204, gnl|rn3|chr3 (143085529-143085989) | |
| 289-1026, gnl|bosTau2|chr11 (8001499-8000763) | |
| 289-1026, gnl|Hg17|chr20 (29773729-29773118) | |
| 289-1026, gnl|Mm7|chr2 (152570894-152570283) | |
| 597-900, gnl|bosTau2|chr10 (13808687-13808384) | |
| 597-900, gnl|canFam2|chr8 (6573573-6573909) | |
| 597-900, gnl|danRer3|chr2 (5696079-5696433) | |
| 597-900, gnl|dasNov1|scaffold_39571 (10043-9707) | |
| 597-900, gnl|echTel1|scaffold_237097 (3423-3731) | |
| 597-900, gnl|fr1|chrUn (4138932-4139264) | |
| 597-900, gnl|galGal2|chr20 (9602094-9601759) | |
| 597-900, gnl|hg17|chr14 (22846928-22847264) | |
| 597-900, gnl|Hg17|chr14 (22846946-22847249) | |
| 597-900, gnl|loxAfr1|scaffold_80176 (9046-8709) | |
| 597-900, gnl|mm7|chr14 (49751427-49751762) | |
| 597-900, gnl|Mm7|chr14 (49751445-49751748) | |
| 597-900, gnl|monDom2|scaffold_12 (26409952-26409616) | |
| 597-900, gnl|oryCun1|scaffold_206763 (36555-36891) | |
| 597-900, gnl|panTro1|chr15 (21819379-21819715) | |
| 597-900, gnl|rheMac2|chr7 (86147940-86148276) | |
| 597-900, gnl|rn3|chr15 (32999922-33000258) | |
| 597-900, gnl|tetNig1|chrUn_random (109072065-109071759) | |
| 597-900, gnl|xenTro1|scaffold_53 (171726-171390) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |