Non-Coding RNA Search

Ss1.1-Thy1-THY010062D05.5

Sequence:


               
               ACATAAAAGCAAAGAAAAAATTCATTCCAGAGCTCAAAGATAACAGTATTTTTGTATATG
TCCTAGTAGTTTTTCCATGCCTGTATGTTTATCTTTCTTCACAAAAATGATGTATTATCC
ATACTGTTTTGTAGCCTGCTTCTTCTTCTTGTAAAGATTTTTCTATTTCAGTAAATAATC
TTTTACAAAATTATTTTTAATGGCTGCTGAGTATTCCATGTCTGTATCATTATTTATGTA
ATTCCTTATTATTTGGTGTTTAACTTATTATAAGGTGTTTAACTTATAAATAAACAGTGT
ACATTTTGATTTTTTTTTAGAATTGTCCTTTTTAGGCAAATTGTAATTATTTAATGATGT
GTGTGTGTATATATAACCATGTATATAGCCTTAGTTAATCAAGGTAATAGAAAAAGAATG
AAGTAAAATAGTCCAAACTCAAACCAAACCATAACTAAATCTTAATTATTCCAGTGCAAA
TTAACTGTAGATAAAATGCTACAAGGACCTGCAACTACCCCCTGCTCTGCAGTTTGACCA
TTGCATACTTACTAGTGCTGACTGCTGCTCACATCCCAGGAGCTGGAGAAGATAAGCCAC
ACTTGAGAGTACAGAATGCTGGTTATGGGTATCAGGGAATAATAGCAAATCTGTTAGTTT
GCTCAGGATGTCAAATAGTTGACCGAGTTACCTAATTGCCCTCTTTGACAAGAGAGGACA
ATAGTTTTAAGGAGTACATAGGAAGCTCATTCATAATGGTCTTTATTCGCCACTGCTGAG
AAGGAAAGGGGAATAGACAAATTTGGAAAATGAGAAAAGTTACTAATTGAGAAGGAATAA
AAATTCTGTACAGCACCGAGTACCCAGTGGAGTCCTGGAACCGTGCATTTGTAGCTGAGC
CAGTCAGCGTGGTACTCATTCCTGTATCTTTTGCAATAGAGCCTAATAGCTTAATTCTTA
GGAAATGTAGCAAAGCTAGTCACTATCTGATGAAGAAACACTGTCATCTACTCTCTTAGA
AAATAGATGTTTTTAGGGAAAAAAATTTTAAATTGAGGCTTAATATCTTAAATTTTCAAG
ATTTTAGCTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATAAAAGCAAAGAAAAAATTCATTCCAGAGCTCAAAGATAACAGTATTTTTGTATATG
TCCTAGTAGTTTTTCCATGCCTGTATGTTTATCTTTCTTCACAAAAATGATGTATTATCC
ATACTGTTTTGTAGCCTGCTTCTTCTTCTTGTAAAGATTTTTCTATTTCAGTAAATAATC
TTTTACAAAATTATTTTTAATGGCTGCTGAGTATTCCATGTCTGTATCATTATTTATGTA
ATTCCTTATTATTTGGTGTTTAACTTATTATAAGGTGTTTAACTTATAAATAAACAGTGT
ACATTTTGATTTTTTTTTAGAATTGTCCTTTTTAGGCAAATTGTAATTATTTAATGATGT
GTGTGTGTATATATAACCATGTATATAGCCTTAGTTAATCAAGGTAATAGAAAAAGAATG
AAGTAAAATAGTCCAAACTCAAACCAAACCATAACTAAATCTTAATTATTCCAGTGCAAA
TTAACTGTAGATAAAATGCTACAAGGACCTGCAACTACCCCCTGCTCTGCAGTTTGACCA
TTGCATACTTACTAGTGCTGACTGCTGCTCACATCCCAGGAGCTGGAGAAGATAAGCCAC
ACTTGAGAGTACAGAATGCTGGTTATGGGTATCAGGGAATAATAGCAAATCTGTTAGTTT
GCTCAGGATGTCAAATAGTTGACCGAGTTACCTAATTGCCCTCTTTGACAAGAGAGGACA
ATAGTTTTAAGGAGTACATAGGAAGCTCATTCATAATGGTCTTTATTCGCCACTGCTGAG
AAGGAAAGGGGAATAGACAAATTTGGAAAATGAGAAAAGTTACTAATTGAGAAGGAATAA
AAATTCTGTACAGCACCGAGTACCCAGTGGAGTCCTGGAACCGTGCATTTGTAGCTGAGC
CAGTCAGCGTGGTACTCATTCCTGTATCTTTTGCAATAGAGCCTAATAGCTTAATTCTTA
GGAAATGTAGCAAAGCTAGTCACTATCTGATGAAGAAACACTGTCATCTACTCTCTTAGA
AAATAGATGTTTTTAGGGAAAAAAATTTTAAATTGAGGCTTAATATCTTAAATTTTCAAG
ATTTTAGCTTGT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               12-1081, gnl|bosTau2|chr3 (64759245-64758161)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-1081, gnl|bosTau2|chr3 (64759245-64758161)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ret (0.257467)
               

               
               bfe (0.149858)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.257467)
               

               
               bfe (0.149858)