Non-Coding RNA Search

Ss1.1-Thy1-THY010064A05.5

Sequence:


               
               ACTTATTCCTGACTCAGAACTGATTCACACGCACTCGTAATCTTTGGCTGTAGCTTCCAC
ACAGCTGTTGATGTTGAGTTTCTTATTTATTTCTGGCACCTGGGGATTTCTGTTGTTTGG
CTTTGAACTTGGATATACATTTAAAACAAAAATTTTTTTTGAATTTCTATGTTTTTAAAG
TAGGAGTGGAGAAAAGAGGCTGTTTCCCAGTTTGACTCAGTGAGCCATGTTGAATGGACA
CTTACTTCTAAAATTCTACAGTGAGAACCTACTGTATAGTGTTGGAAAATCTCAATAGTT
TGTAATAATCTTTCTGGGAAAAAGAATGGATATGTTTGTATGTATGACTGATTCACTTTG
CTGTGCACCTGAAACTAGTGCAACATTGTAAGTCAACCACACTCCAGTAAAATTAAATTA
AAAAAATTCTGCAGATCAGATTTACTCAGAATGTTTTATTCACTCTAAAAATTTATAGCA
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AAGTAAGATGGTGGAGTAACAGGA
CATAAGGCTCATATACTCCCACAAATACATTGAAAATACAACTATATGTGGAACTATTTG
CACAGGAAATTTGTGAAAACCTGAAAAAGACCCCAAGATTATGATAGAGCAAGAAAAACA
TTAGAACACAAGAAAGACAAAGAGTAAGAGAAAAAAGAATGAAAAGGAAATGAGATGGGA
CCTGCCCTCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTATTCCTGACTCAGAACTGATTCACACGCACTCGTAATCTTTGGCTGTAGCTTCCAC
ACAGCTGTTGATGTTGAGTTTCTTATTTATTTCTGGCACCTGGGGATTTCTGTTGTTTGG
CTTTGAACTTGGATATACATTTAAAACAAAAATTTTTTTTGAATTTCTATGTTTTTAAAG
TAGGAGTGGAGAAAAGAGGCTGTTTCCCAGTTTGACTCAGTGAGCCATGTTGAATGGACA
CTTACTTCTAAAATTCTACAGTGAGAACCTACTGTATAGTGTTGGAAAATCTCAATAGTT
TGTAATAATCTTTCTGGGAAAAAGAATGGATATGTTTGTATGTATGACTGATTCACTTTG
CTGTGCACCTGAAACTAGTGCAACATTGTAAGTCAACCACACTCCAGTAAAATTAAATTA
AAAAAATTCTGCAGATCAGATTTACTCAGAATGTTTTATTCACTCTAAAAATTTATAGCA
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AAGTAAGATGGTGGAGTAACAGGA
CATAAGGCTCATATACTCCCACAAATACATTGAAAATACAACTATATGTGGAACTATTTG
CACAGGAAATTTGTGAAAACCTGAAAAAGACCCCAAGATTATGATAGAGCAAGAAAAACA
TTAGAACACAAGAAAGACAAAGAGTAAGAGAAAAAAGAATGAAAAGGAAATGAGATGGGA
CCTGCCCTCCCA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-238, gnl|bosTau2|chr2 (5612615-5612379)
               


               
               264-428, gnl|bosTau2|chr22 (8733300-8733133)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-238, gnl|bosTau2|chr2 (5612615-5612379)
               


               
               264-428, gnl|bosTau2|chr22 (8733300-8733133)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               gul (0.177588)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)

	3-238, gnl\|bosTau2\|chr2 (5612615-5612379)

	264-428, gnl\|bosTau2\|chr22 (8733300-8733133)