Non-Coding RNA Search

Ss1.1-Thy1-THY010066A04.5

Sequence:


               
               CAGGCCTCTATCCTTCCGCTTACTGGTTTGGACAGGCGCTGGTGGACATCCCACTGTACT
TCCTGATCCTGCTTCTAATGCAAATAATGGATTACATTTTTAGCCCAGATGAGATTATAT
TTATAATTCAAAACTTGTCAGTTCAGATCCTGTGTAGTATTGGATATGTCTCCTCTCTTG
TTTTCTTGACATACGTGATTTCATTCATTTTCCGCAACGGGAGAAAAAACAGTGGCATTT
GGTCATTTTTCTTCTTAATTATCACCATCTTCTCCATAGTTGCCATCGATCTCAGCGAGT
ACGGATTTCTAGGGCTATTTCTCTGCACCATATTAATACCACCCTTCACCCTGATTGGCT
CTCTATTCATTTTCTCCGAGATTTCCCCTGACTCGATGGATTATTTGGGAGCTTCAGAAC
AGCAAATTGTATTTCTGGCATTGCTAATACCTTACCTTCATTTTTTCATTTTCCTCTTTG
TTCTACGATGTCTGGAAATGAACTTTAGGAAGAAGTCAATGAGAAAGGATCCCGTGTTCA
GAATTTCACCAAGAGGCAGCAGTGTTTTTCCAAACCCAGAAAAACCCGACGGAGAGGATG
AAGATGTCCAGATGGAAAGAATAAAAACAGCAAATGCTGTGACAGTCCCAGATTCTGATG
AGAAACCAGTTATTATCGCCAGCTGTCTACAGAAGGAATATGCAGGCAAAAAGAGAAACT
GCTTTGCCAGGAGGAAGAAGAAAGTAGCCACAAGAAATATCTCTTTCTGTGTTAAAAAAG
GTGAAGTCATAGGGCTCTTAGGACACAATGGAGCAGGTAAAAGTACAACTATTAAGATGA
TAACTGGAGACACAAAGCCAACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGCCTCTATCCTTCCGCTTACTGGTTTGGACAGGCGCTGGTGGACATCCCACTGTACT
TCCTGATCCTGCTTCTAATGCAAATAATGGATTACATTTTTAGCCCAGATGAGATTATAT
TTATAATTCAAAACTTGTCAGTTCAGATCCTGTGTAGTATTGGATATGTCTCCTCTCTTG
TTTTCTTGACATACGTGATTTCATTCATTTTCCGCAACGGGAGAAAAAACAGTGGCATTT
GGTCATTTTTCTTCTTAATTATCACCATCTTCTCCATAGTTGCCATCGATCTCAGCGAGT
ACGGATTTCTAGGGCTATTTCTCTGCACCATATTAATACCACCCTTCACCCTGATTGGCT
CTCTATTCATTTTCTCCGAGATTTCCCCTGACTCGATGGATTATTTGGGAGCTTCAGAAC
AGCAAATTGTATTTCTGGCATTGCTAATACCTTACCTTCATTTTTTCATTTTCCTCTTTG
TTCTACGATGTCTGGAAATGAACTTTAGGAAGAAGTCAATGAGAAAGGATCCCGTGTTCA
GAATTTCACCAAGAGGCAGCAGTGTTTTTCCAAACCCAGAAAAACCCGACGGAGAGGATG
AAGATGTCCAGATGGAAAGAATAAAAACAGCAAATGCTGTGACAGTCCCAGATTCTGATG
AGAAACCAGTTATTATCGCCAGCTGTCTACAGAAGGAATATGCAGGCAAAAAGAGAAACT
GCTTTGCCAGGAGGAAGAAGAAAGTAGCCACAAGAAATATCTCTTTCTGTGTTAAAAAAG
GTGAAGTCATAGGGCTCTTAGGACACAATGGAGCAGGTAAAAGTACAACTATTAAGATGA
TAACTGGAGACACAAAGCCAACTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-146, gnl|bosTau2|chr19 (56052007-56052152)
               

               
               1-146, gnl|Hg17|chr17 (64515943-64515798)
               

               
               1-146, gnl|Mm7|chr11 (110239751-110239606)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr19 (56052007-56052152)
               

               
               1-146, gnl|Hg17|chr17 (64515943-64515798)
               

               
               1-146, gnl|Mm7|chr11 (110239751-110239606)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	1-146, gnl\|bosTau2\|chr19 (56052007-56052152)
	1-146, gnl\|Hg17\|chr17 (64515943-64515798)
	1-146, gnl\|Mm7\|chr11 (110239751-110239606)