Ss1.1-Thy1-THY010071D01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATCGAGCGTGGCGCCGGCGGCTCCTCAGCGCTCGGCAGCCATGGACCTCGCGGCGGCAG CGGAACCGAGCGCCGGCAGCCAGCACTTAGAAGTCCGCGACGAGGTGGCCGAAAAGTGCC AGAAATTGTTCCTAGATTTCTTGGAGGAATTCCAGAACAGCGATGGAGAAATTAAGTACT TGCAGTTAGCTGAGGAACTAATTCGTCCTGAGAGAAACACATTGGTTGTGAGTTTTGTGG ACCTGGAGCAATTTAACCAGCAACTTTCTACCACTATTCAAGAGGAGTTCTATAGGGTTT ACCCTTACCTATGTCGCGCTTTGAAAACGTTTGTCAAAGACCGTAAAGAGATTCCCCTGG CCAAGGATTTTTATGTTGCATTCCAAGACCTTCCTACCAGACACAAAATTCGAGAACTTA ACTCATCTAGAATTGGTTTGCTCACTCGCATCAGTGGGCAGGTAGTACGGACTCACCCGG TTCACCCAGAGCTTGTGAGCGGAACTTTCCTGTGCTTGGACTGTCAAACAGTGATCAGGG ACGTAGAACAGCAGTTCAAGTACACACAGCCAAACATCTGCCGAAATCCAGTTTGTGCCA ATAGAAAGAGATTCCTGCTAGATACAAATAAATCAAGATTTGTTGATTTTCAAAAGGTTC GTATTCAAGAGACTCAAGCTGAGCTTCCCCGAGGGAGTATCCCCCGCAGCCTAGAAGTGA TCTTGAGGGCTGAAGCTGTGGAGTCAGCTCAAGCTGGTGATAAGTGTGACTTCACAGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATCGAGCGTGGCGCCGGCGGCTCCTCAGCGCTCGGCAGCCATGGACCTCGCGGCGGCAG CGGAACCGAGCGCCGGCAGCCAGCACTTAGAAGTCCGCGACGAGGTGGCCGAAAAGTGCC AGAAATTGTTCCTAGATTTCTTGGAGGAATTCCAGAACAGCGATGGAGAAATTAAGTACT TGCAGTTAGCTGAGGAACTAATTCGTCCTGAGAGAAACACATTGGTTGTGAGTTTTGTGG ACCTGGAGCAATTTAACCAGCAACTTTCTACCACTATTCAAGAGGAGTTCTATAGGGTTT ACCCTTACCTATGTCGCGCTTTGAAAACGTTTGTCAAAGACCGTAAAGAGATTCCCCTGG CCAAGGATTTTTATGTTGCATTCCAAGACCTTCCTACCAGACACAAAATTCGAGAACTTA ACTCATCTAGAATTGGTTTGCTCACTCGCATCAGTGGGCAGGTAGTACGGACTCACCCGG TTCACCCAGAGCTTGTGAGCGGAACTTTCCTGTGCTTGGACTGTCAAACAGTGATCAGGG ACGTAGAACAGCAGTTCAAGTACACACAGCCAAACATCTGCCGAAATCCAGTTTGTGCCA ATAGAAAGAGATTCCTGCTAGATACAAATAAATCAAGATTTGTTGATTTTCAAAAGGTTC GTATTCAAGAGACTCAAGCTGAGCTTCCCCGAGGGAGTATCCCCCGCAGCCTAGAAGTGA TCTTGAGGGCTGAAGCTGTGGAGTCAGCTCAAGCTGGTGATAAGTGTGACTTCACAGGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 6-148, gnl|bosTau2|chr2 (37835029-37835171) | |
| 6-148, gnl|Hg17|chr2 (136467703-136467561) | |
| 6-148, gnl|Mm7|chr1 (128239780-128239593) | |
| 150-296, gnl|bosTau2|chr2 (37839936-37840082) | |
| 150-296, gnl|canFam2|chr19 (41675651-41675846) | |
| 150-296, gnl|danRer3|chr2 (44587511-44587339) | |
| 150-296, gnl|dasNov1|scaffold_5661 (54113-53914) | |
| 150-296, gnl|echTel1|scaffold_310123 (39385-39584) | |
| 150-296, gnl|fr1|chrUn (68104460-68104617) | |
| 150-296, gnl|galGal2|chr7 (31357818-31357976) | |
| 150-296, gnl|hg17|chr2 (136463994-136464189) | |
| 150-296, gnl|Hg17|chr2 (136464144-136463998) | |
| 150-296, gnl|loxAfr1|scaffold_3759 (27155-26957) | |
| 150-296, gnl|mm7|chr1 (128235642-128235838) | |
| 150-296, gnl|Mm7|chr1 (128235792-128235646) | |
| 150-296, gnl|monDom2|scaffold_2 (21481342-21481535) | |
| 150-296, gnl|oryCun1|scaffold_183084 (38542-38738) | |
| 150-296, gnl|panTro1|chr13 (25460462-25460657) | |
| 150-296, gnl|rheMac2|chr13 (116279865-116279670) | |
| 150-296, gnl|rn3|chr13 (41080739-41080927) | |
| 150-296, gnl|tetNig1|chr15 (2402121-2401964) | |
| 150-296, gnl|xenTro1|scaffold_31 (1402765-1402581) | |
| 403-658, gnl|bosTau2|chr2 (37842591-37842846) | |
| 403-658, gnl|canFam2|chr19 (41672129-41672388) | |
| 403-658, gnl|danRer3|chr2 (44592530-44592276) | |
| 403-658, gnl|dasNov1|scaffold_5661 (57067-56807) | |
| 403-658, gnl|echTel1|scaffold_291595 (42763-43020) | |
| 403-658, gnl|fr1|chrUn (68103631-68103971) | |
| 403-658, gnl|galGal2|chr7 (31356420-31356674) | |
| 403-658, gnl|hg17|chr2 (136459904-136460165) | |
| 403-658, gnl|Hg17|chr2 (136460166-136459911) | |
| 403-658, gnl|loxAfr1|scaffold_3759 (29860-29602) | |
| 403-658, gnl|mm7|chr1 (128231558-128231819) | |
| 403-658, gnl|Mm7|chr1 (128231820-128231565) | |
| 403-658, gnl|monDom2|scaffold_2 (21476514-21476775) | |
| 403-658, gnl|oryCun1|scaffold_183084 (34316-34577) | |
| 403-658, gnl|panTro1|chr13 (25456385-25456647) | |
| 403-658, gnl|rheMac2|chr13 (116283899-116283641) | |
| 403-658, gnl|rn3|chr13 (41076329-41076587) | |
| 403-658, gnl|tetNig1|chr15 (2402827-2402496) | |
| 403-658, gnl|xenTro1|scaffold_31 (1403484-1403230) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-148, gnl|bosTau2|chr2 (37835029-37835171) | |
| 6-148, gnl|Hg17|chr2 (136467703-136467561) | |
| 6-148, gnl|Mm7|chr1 (128239780-128239593) | |
| 150-296, gnl|bosTau2|chr2 (37839936-37840082) | |
| 150-296, gnl|canFam2|chr19 (41675651-41675846) | |
| 150-296, gnl|danRer3|chr2 (44587511-44587339) | |
| 150-296, gnl|dasNov1|scaffold_5661 (54113-53914) | |
| 150-296, gnl|echTel1|scaffold_310123 (39385-39584) | |
| 150-296, gnl|fr1|chrUn (68104460-68104617) | |
| 150-296, gnl|galGal2|chr7 (31357818-31357976) | |
| 150-296, gnl|hg17|chr2 (136463994-136464189) | |
| 150-296, gnl|Hg17|chr2 (136464144-136463998) | |
| 150-296, gnl|loxAfr1|scaffold_3759 (27155-26957) | |
| 150-296, gnl|mm7|chr1 (128235642-128235838) | |
| 150-296, gnl|Mm7|chr1 (128235792-128235646) | |
| 150-296, gnl|monDom2|scaffold_2 (21481342-21481535) | |
| 150-296, gnl|oryCun1|scaffold_183084 (38542-38738) | |
| 150-296, gnl|panTro1|chr13 (25460462-25460657) | |
| 150-296, gnl|rheMac2|chr13 (116279865-116279670) | |
| 150-296, gnl|rn3|chr13 (41080739-41080927) | |
| 150-296, gnl|tetNig1|chr15 (2402121-2401964) | |
| 150-296, gnl|xenTro1|scaffold_31 (1402765-1402581) | |
| 403-658, gnl|bosTau2|chr2 (37842591-37842846) | |
| 403-658, gnl|canFam2|chr19 (41672129-41672388) | |
| 403-658, gnl|danRer3|chr2 (44592530-44592276) | |
| 403-658, gnl|dasNov1|scaffold_5661 (57067-56807) | |
| 403-658, gnl|echTel1|scaffold_291595 (42763-43020) | |
| 403-658, gnl|fr1|chrUn (68103631-68103971) | |
| 403-658, gnl|galGal2|chr7 (31356420-31356674) | |
| 403-658, gnl|hg17|chr2 (136459904-136460165) | |
| 403-658, gnl|Hg17|chr2 (136460166-136459911) | |
| 403-658, gnl|loxAfr1|scaffold_3759 (29860-29602) | |
| 403-658, gnl|mm7|chr1 (128231558-128231819) | |
| 403-658, gnl|Mm7|chr1 (128231820-128231565) | |
| 403-658, gnl|monDom2|scaffold_2 (21476514-21476775) | |
| 403-658, gnl|oryCun1|scaffold_183084 (34316-34577) | |
| 403-658, gnl|panTro1|chr13 (25456385-25456647) | |
| 403-658, gnl|rheMac2|chr13 (116283899-116283641) | |
| 403-658, gnl|rn3|chr13 (41076329-41076587) | |
| 403-658, gnl|tetNig1|chr15 (2402827-2402496) | |
| 403-658, gnl|xenTro1|scaffold_31 (1403484-1403230) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| nlu (0.191681) | |
| eje (0.0988338) |