Ss1.1-Thy1-THY010074G02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACGCTGAGACAGGCTCAGGACGGATCTGAGAGGTTCCTACAGCTGACCGGCGCTGGGGC TGTGTTCCTGTGGAGGCTATGAGCTGCACCATCGAGAAGATTCTGACCGATGCTAAGACG CTACTGGAGAGGCTGCGGGAGCACGATGCTGCGGCCGAGTCGCTAGTGGACCAGTCCGCG GCGCTGCACCGGCGGGTGGCCGCTATGCGGGAGGCGGGGACAGCCCTTCCGGACCAGTAT CAAGAGGATGCATCCGATATAAAGGACATGTCCAAATACAAACCTCACATTCTGCTCTCC CAAGAGAATACACAGATTAGAGACTTGCAGCAGGAAAACAGAGAGCTATGGGTTTCCTTG GAGGAACACCAGGATGCTTTGGAACTCATCATGAGCAAATACCGGAAACAGATGTTACAA TTAATGGTTGCTAAAAAAGCAGTGGATGCTGAACCAGTCCTGAAAGCTCACCAGTCTCAC TCTGCAGAAATTGAGAGTCAGATTGACAGAATCTGTGAAATGGGAGAAGTGATGAGGAAA GCAGTTCAGATGGATGATGACCAATTTTGTAAGATTCAGGAAAAACTAGCACAATTAGAG CTTGAAAATAAGGAACTTCGAGAGTTACTGTCCATCAGCAGTGAGTCTCTTCAGGTCAGG AAGGACAATTCAATGGACACTGCTTCCCAAGCCATCAAATAATTCAGCTTCTGAATGACA GCTGGAGATTGTTTATTAAGGAAAGAAGTTATTATCTCTCTATTCTAGTGTTGTCCATTT AGTGTCTTGCCTCAGACTTGATTTAATGTTGATTAAATGTATCAAGTGGCATTTTAGAAT TCACAGTCAAAAGTTCTGTCCACAGAACAGTTTTTGGGTGAAACACACTGAGTTTCACCA TTCCTTTCTCTAAGAGACTATTAATTTTCATATCTGGGACCTCAATTTATATAAACTGTG TTTTCAGTTCATTTTTGTTCTTTCATATCTCTGAAACTTAGAGCATTTTGTTAAAAGCCA GTGCTTTTATTCTATATAGGCTTATAAATTACAATTCTAAAAAATTTAAAGAGAGAGTTC CCATCATGGCTCAGCGGGTTAAGAACCCAACTAGTATCCATAAGGATGCAGATTCGATCC CTGGCCTCACTCAGTGGGTTAAGGATCCGGCTTTGCCATTAGCTGTGGTGTAGGCCACAG ATGTGGCTTGGATCTGGAGTTCCTGTGACTGTGGTTTAGGCCAGAAGCTACAGTCCATTT TGACTCCTAGCCTGTGAACTTCCATATGCCACAGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACGCTGAGACAGGCTCAGGACGGATCTGAGAGGTTCCTACAGCTGACCGGCGCTGGGGC TGTGTTCCTGTGGAGGCTATGAGCTGCACCATCGAGAAGATTCTGACCGATGCTAAGACG CTACTGGAGAGGCTGCGGGAGCACGATGCTGCGGCCGAGTCGCTAGTGGACCAGTCCGCG GCGCTGCACCGGCGGGTGGCCGCTATGCGGGAGGCGGGGACAGCCCTTCCGGACCAGTAT CAAGAGGATGCATCCGATATAAAGGACATGTCCAAATACAAACCTCACATTCTGCTCTCC CAAGAGAATACACAGATTAGAGACTTGCAGCAGGAAAACAGAGAGCTATGGGTTTCCTTG GAGGAACACCAGGATGCTTTGGAACTCATCATGAGCAAATACCGGAAACAGATGTTACAA TTAATGGTTGCTAAAAAAGCAGTGGATGCTGAACCAGTCCTGAAAGCTCACCAGTCTCAC TCTGCAGAAATTGAGAGTCAGATTGACAGAATCTGTGAAATGGGAGAAGTGATGAGGAAA GCAGTTCAGATGGATGATGACCAATTTTGTAAGATTCAGGAAAAACTAGCACAATTAGAG CTTGAAAATAAGGAACTTCGAGAGTTACTGTCCATCAGCAGTGAGTCTCTTCAGGTCAGG AAGGACAATTCAATGGACACTGCTTCCCAAGCCATCAAATAATTCAGCTTCTGAATGACA GCTGGAGATTGTTTATTAAGGAAAGAAGTTATTATCTCTCTATTCTAGTGTTGTCCATTT AGTGTCTTGCCTCAGACTTGATTTAATGTTGATTAAATGTATCAAGTGGCATTTTAGAAT TCACAGTCAAAAGTTCTGTCCACAGAACAGTTTTTGGGTGAAACACACTGAGTTTCACCA TTCCTTTCTCTAAGAGACTATTAATTTTCATATCTGGGACCTCAATTTATATAAACTGTG TTTTCAGTTCATTTTTGTTCTTTCATATCTCTGAAACTTAGAGCATTTTGTTAAAAGCCA GTGCTTTTATTCTATATAGGCTTATAAATTACAATTCTAAAAAATTTAAAGAGAGAGTTC CCATCATGGCTCAGCGGGTTAAGAACCCAACTAGTATCCATAAGGATGCAGATTCGATCC CTGGCCTCACTCAGTGGGTTAAGGATCCGGCTTTGCCATTAGCTGTGGTGTAGGCCACAG ATGTGGCTTGGATCTGGAGTTCCTGTGACTGTGGTTTAGGCCAGAAGCTACAGTCCATTT TGACTCCTAGCCTGTGAACTTCCATATGCCACAGGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 1-237, gnl|bosTau2|chr3 (26306019-26306255) | |
| 1-237, gnl|canFam2|chr17 (55550628-55550789) | |
| 1-237, gnl|danRer3|chr23 (52271078-52270934) | |
| 1-237, gnl|dasNov1|scaffold_15400 (12685-12524) | |
| 1-237, gnl|echTel1|scaffold_287754 (8817-8978) | |
| 1-237, gnl|fr1|chrUn (255198387-255198539) | |
| 1-237, gnl|hg17|chr1 (115035112-115035273) | |
| 1-237, gnl|Hg17|chr1 (115035348-115035112) | |
| 1-237, gnl|loxAfr1|scaffold_2965 (30568-30729) | |
| 1-237, gnl|mm7|chr3 (102790137-102789976) | |
| 1-237, gnl|Mm7|chr3 (102789902-102790135) | |
| 1-237, gnl|monDom2|scaffold_82 (170553-170714) | |
| 1-237, gnl|oryCun1|scaffold_206314 (107393-107554) | |
| 1-237, gnl|panTro1|chr1 (114834276-114834437) | |
| 1-237, gnl|rheMac2|chr1 (117778186-117778347) | |
| 1-237, gnl|rn3|chr2 (198189136-198188975) | |
| 1-237, gnl|tetNig1|chrUn_random (27653957-27654116) | |
| 1-237, gnl|xenTro1|scaffold_1517 (11189-11020) | |
| 342-514, gnl|bosTau2|chr3 (26307561-26307731) | |
| 342-514, gnl|Hg17|chr1 (115033949-115033782) | |
| 342-514, gnl|Mm7|chr3 (102791409-102791579) | |
| 599-1070, gnl|bosTau2|chr3 (26311018-26311497) | |
| 599-1070, gnl|canFam2|chr17 (55545202-55545641) | |
| 599-1070, gnl|danRer3|chr23 (52279820-52279376) | |
| 599-1070, gnl|dasNov1|scaffold_15484 (43543-43915) | |
| 599-1070, gnl|echTel1|scaffold_287754 (570-977) | |
| 599-1070, gnl|hg17|chr1 (115028531-115028949) | |
| 599-1070, gnl|Hg17|chr1 (115029037-115028557) | |
| 599-1070, gnl|loxAfr1|scaffold_2965 (24725-25149) | |
| 599-1070, gnl|mm7|chr3 (102796373-102795964) | |
| 599-1070, gnl|Mm7|chr3 (102795874-102796343) | |
| 599-1070, gnl|monDom2|scaffold_82 (151175-151599) | |
| 599-1070, gnl|oryCun1|scaffold_206314 (100479-100891) | |
| 599-1070, gnl|panTro1|chr1 (114827695-114828106) | |
| 599-1070, gnl|rheMac2|chr1 (117771278-117771695) | |
| 599-1070, gnl|rn3|chr2 (198195460-198195044) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-237, gnl|bosTau2|chr3 (26306019-26306255) | |
| 1-237, gnl|canFam2|chr17 (55550628-55550789) | |
| 1-237, gnl|danRer3|chr23 (52271078-52270934) | |
| 1-237, gnl|dasNov1|scaffold_15400 (12685-12524) | |
| 1-237, gnl|echTel1|scaffold_287754 (8817-8978) | |
| 1-237, gnl|fr1|chrUn (255198387-255198539) | |
| 1-237, gnl|hg17|chr1 (115035112-115035273) | |
| 1-237, gnl|Hg17|chr1 (115035348-115035112) | |
| 1-237, gnl|loxAfr1|scaffold_2965 (30568-30729) | |
| 1-237, gnl|mm7|chr3 (102790137-102789976) | |
| 1-237, gnl|Mm7|chr3 (102789902-102790135) | |
| 1-237, gnl|monDom2|scaffold_82 (170553-170714) | |
| 1-237, gnl|oryCun1|scaffold_206314 (107393-107554) | |
| 1-237, gnl|panTro1|chr1 (114834276-114834437) | |
| 1-237, gnl|rheMac2|chr1 (117778186-117778347) | |
| 1-237, gnl|rn3|chr2 (198189136-198188975) | |
| 1-237, gnl|tetNig1|chrUn_random (27653957-27654116) | |
| 1-237, gnl|xenTro1|scaffold_1517 (11189-11020) | |
| 342-514, gnl|bosTau2|chr3 (26307561-26307731) | |
| 342-514, gnl|Hg17|chr1 (115033949-115033782) | |
| 342-514, gnl|Mm7|chr3 (102791409-102791579) | |
| 599-1070, gnl|bosTau2|chr3 (26311018-26311497) | |
| 599-1070, gnl|canFam2|chr17 (55545202-55545641) | |
| 599-1070, gnl|danRer3|chr23 (52279820-52279376) | |
| 599-1070, gnl|dasNov1|scaffold_15484 (43543-43915) | |
| 599-1070, gnl|echTel1|scaffold_287754 (570-977) | |
| 599-1070, gnl|hg17|chr1 (115028531-115028949) | |
| 599-1070, gnl|Hg17|chr1 (115029037-115028557) | |
| 599-1070, gnl|loxAfr1|scaffold_2965 (24725-25149) | |
| 599-1070, gnl|mm7|chr3 (102796373-102795964) | |
| 599-1070, gnl|Mm7|chr3 (102795874-102796343) | |
| 599-1070, gnl|monDom2|scaffold_82 (151175-151599) | |
| 599-1070, gnl|oryCun1|scaffold_206314 (100479-100891) | |
| 599-1070, gnl|panTro1|chr1 (114827695-114828106) | |
| 599-1070, gnl|rheMac2|chr1 (117771278-117771695) | |
| 599-1070, gnl|rn3|chr2 (198195460-198195044) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| gul (0.177588) | |
| liv (0.146284) | |
| che (0.136314) | |
| ssp (0.13552) | |
| pgl (0.118483) | |
| jej (0.0989218) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.177588) | |
| liv (0.146284) | |
| che (0.136314) | |
| ssp (0.13552) | |
| pgl (0.118483) | |
| jej (0.0989218) |