Non-Coding RNA Search

Ss1.1-Thy1-THY010080G11.5

Sequence:


               
               GCTTTTTGAGTATTTGTGTTTCTTCCTTGGAGAATTATTTATTCAAGTCCTTTGCCCATT
TTCTAGATAGGTTCTTTTGCTTTTTGTTGTTGGGTTCTAAGAGTTCTTTATGTATTCTGG
ATATAACCCATATCAGAATTATGATTTGCAAATATACTTTTCTAATTTTGTAGATTGTCT
TTTCATTCTCTTGCTAGTGTCCTTTGCACAAGTGTTTTTTGTTTTAATGAAGTACAGTTT
ATCCTTTTTTTGGTTGGTTGTGCTTTTGGTGTCAAGTCAGAGAATCCATTGCTAAATCCA
AGGTCACAAAGACTTATCCCTTTGTTTTTTTCTGAGAAAGATATGTCAAAGTTCTAAATG
GAAAAATTTGCAACCTTGAATACTCTACCCAGCCAGGTTATCATTTAAAAATAGAAGAAA
AAATAAAGAATTTCTCAAACAAAAACTAAATACAACAATACTAAACCTGTCCTAAAAGAG
TACTGAAAAGTCTCCTCCAAAATAGGAAAGAAGTAAGAAGATATCAGGTAGAGGAAATCG
CATCTGGAAAGTAATCACTTAAATAAACCAGAGTACAGATTTAAAAAAAAAAAACAAAAA
ACCTATTCATGAAAGTAGTGATAAACACAAGGAACAGCAAAAGGATAAACATAATGATGT
AAAAAAAGGCATCAAAATCATAAAATGTGCGAAGGATTACAAGAAAATCTAGACTTTTTT
TAAAAAAAGACTGTCTGATCCTATGTGGCTATCAGTCTAAAGAGAGCAGATATAGGAAGG
GGTTGACATATTTGAAAAATGAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTTTGAGTATTTGTGTTTCTTCCTTGGAGAATTATTTATTCAAGTCCTTTGCCCATT
TTCTAGATAGGTTCTTTTGCTTTTTGTTGTTGGGTTCTAAGAGTTCTTTATGTATTCTGG
ATATAACCCATATCAGAATTATGATTTGCAAATATACTTTTCTAATTTTGTAGATTGTCT
TTTCATTCTCTTGCTAGTGTCCTTTGCACAAGTGTTTTTTGTTTTAATGAAGTACAGTTT
ATCCTTTTTTTGGTTGGTTGTGCTTTTGGTGTCAAGTCAGAGAATCCATTGCTAAATCCA
AGGTCACAAAGACTTATCCCTTTGTTTTTTTCTGAGAAAGATATGTCAAAGTTCTAAATG
GAAAAATTTGCAACCTTGAATACTCTACCCAGCCAGGTTATCATTTAAAAATAGAAGAAA
AAATAAAGAATTTCTCAAACAAAAACTAAATACAACAATACTAAACCTGTCCTAAAAGAG
TACTGAAAAGTCTCCTCCAAAATAGGAAAGAAGTAAGAAGATATCAGGTAGAGGAAATCG
CATCTGGAAAGTAATCACTTAAATAAACCAGAGTACAGATTTAAAAAAAAAAAACAAAAA
ACCTATTCATGAAAGTAGTGATAAACACAAGGAACAGCAAAAGGATAAACATAATGATGT
AAAAAAAGGCATCAAAATCATAAAATGTGCGAAGGATTACAAGAAAATCTAGACTTTTTT
TAAAAAAAGACTGTCTGATCCTATGTGGCTATCAGTCTAAAGAGAGCAGATATAGGAAGG
GGTTGACATATTTGAAAAATGAGG

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-337, gnl|bosTau2|chr1 (64945549-64945884)
               

               
               1-337, gnl|hg17|chr3 (172776530-172777173)
               

               
               1-337, gnl|Hg17|chr3 (172777124-172776788)
               

               
               1-337, gnl|panTro1|chr2 (176269491-176270134)
               

               
               1-337, gnl|rheMac2|chr2 (115459649-115459025)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-337, gnl|bosTau2|chr1 (64945549-64945884)
               

               
               1-337, gnl|hg17|chr3 (172776530-172777173)
               

               
               1-337, gnl|Hg17|chr3 (172777124-172776788)
               

               
               1-337, gnl|panTro1|chr2 (176269491-176270134)
               

               
               1-337, gnl|rheMac2|chr2 (115459649-115459025)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               spc (0.113366)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.113366)

	1-337, gnl\|bosTau2\|chr1 (64945549-64945884)
	1-337, gnl\|hg17\|chr3 (172776530-172777173)
	1-337, gnl\|Hg17\|chr3 (172777124-172776788)
	1-337, gnl\|panTro1\|chr2 (176269491-176270134)
	1-337, gnl\|rheMac2\|chr2 (115459649-115459025)