Ss1.1-Thy1-THY010086A03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCATTTCTCCACGAGGGGGGGTTAAAGGCCCCCAACCTCCATTTCTCCACGAGGGGGGG TTAAAGGCCCCCAAAATATGTATATATGAAAAGGCCAAAAAGTAACCATCATTGACAGGG AGCTTTAACTAGAGAAGGAAACAGGACCAAACTGGCGGGCTCGGCGAAAGCACAGCCGGC AGCGTCCCGGACGAGGAGATGTCTTTGGTGGACTTGGGGAAGAGGTTGCTAGAAGCAGCA AGAAAAGGCCAAGATGATGAAGTCAGAACATTAATGGCAAATGGTGCCCCATTCACCACA GACTGGCTTGGAACATCACCCCTGCACCTTGCAGCCCAATATGGTCATTATTCCACAGCG GAAGTGCTCCTTCGAGCAGGGGTTAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCCG TTGCATATGGCTGCAGCTGATGGACATGCACACATCGTGGAACTGCTCGTTAGGAATGGT GCAGATGTGAATGCCAAGGACATGCTAAAGATGACAGCTTTGCACTGGGCCACAGAGCAC CACCATCGAGATGTTGTAGAGCTACTTATCAAATACGGAGCTGATGTCCATGCTTTCAGC AAGTTTGATAAATCTGCCTTTGACATAGCCCTGGAGAAAAACAATGCTGAGATTCTGGTC ATTCTTCAGGAAGCAATGCAGAATCAGGTGAATGCTAATCCTGAGAGAGCCAACTCTGTG ACTATGGCTACCCCATTCATCTTTACGTCAGGAGAAGTTGTCAACCTCGCAAGCCTTGTT AATTCAGCCAACACCAAAACAACCTCAGGTAATTCAGAGGAAATCATAGATGGAAATTCT GTTGACTCATCAACCTCAGTGCTGGCCACCCTTGCAGCTCTTGCTGAGGCATCAGCCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCATTTCTCCACGAGGGGGGGTTAAAGGCCCCCAACCTCCATTTCTCCACGAGGGGGGG TTAAAGGCCCCCAAAATATGTATATATGAAAAGGCCAAAAAGTAACCATCATTGACAGGG AGCTTTAACTAGAGAAGGAAACAGGACCAAACTGGCGGGCTCGGCGAAAGCACAGCCGGC AGCGTCCCGGACGAGGAGATGTCTTTGGTGGACTTGGGGAAGAGGTTGCTAGAAGCAGCA AGAAAAGGCCAAGATGATGAAGTCAGAACATTAATGGCAAATGGTGCCCCATTCACCACA GACTGGCTTGGAACATCACCCCTGCACCTTGCAGCCCAATATGGTCATTATTCCACAGCG GAAGTGCTCCTTCGAGCAGGGGTTAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCCG TTGCATATGGCTGCAGCTGATGGACATGCACACATCGTGGAACTGCTCGTTAGGAATGGT GCAGATGTGAATGCCAAGGACATGCTAAAGATGACAGCTTTGCACTGGGCCACAGAGCAC CACCATCGAGATGTTGTAGAGCTACTTATCAAATACGGAGCTGATGTCCATGCTTTCAGC AAGTTTGATAAATCTGCCTTTGACATAGCCCTGGAGAAAAACAATGCTGAGATTCTGGTC ATTCTTCAGGAAGCAATGCAGAATCAGGTGAATGCTAATCCTGAGAGAGCCAACTCTGTG ACTATGGCTACCCCATTCATCTTTACGTCAGGAGAAGTTGTCAACCTCGCAAGCCTTGTT AATTCAGCCAACACCAAAACAACCTCAGGTAATTCAGAGGAAATCATAGATGGAAATTCT GTTGACTCATCAACCTCAGTGCTGGCCACCCTTGCAGCTCTTGCTGAGGCATCAGCCCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 37-201, gnl|bosTau2|chr3 (16504563-16504399) | |
| 37-201, gnl|canFam2|chr17 (63234276-63234475) | |
| 37-201, gnl|dasNov1|scaffold_13873 (45630-45431) | |
| 37-201, gnl|echTel1|scaffold_312232 (154044-153845) | |
| 37-201, gnl|hg17|chr1 (147856285-147856484) | |
| 37-201, gnl|Hg17|chr1 (147856322-147856486) | |
| 37-201, gnl|loxAfr1|scaffold_493 (24876-24680) | |
| 37-201, gnl|mm7|chr3 (95091734-95091539) | |
| 37-201, gnl|Mm7|chr3 (95091695-95091535) | |
| 37-201, gnl|monDom2|scaffold_44 (4282276-4282481) | |
| 37-201, gnl|oryCun1|scaffold_98145 (8984-8788) | |
| 37-201, gnl|panTro1|chr1 (129591459-129591658) | |
| 37-201, gnl|rheMac2|chr1 (129488100-129488299) | |
| 37-201, gnl|rn3|chr2 (190089468-190089274) | |
| 474-670, gnl|bosTau2|chr3 (16498613-16498417) | |
| 474-670, gnl|canFam2|chr17 (63241977-63242189) | |
| 474-670, gnl|danRer3|chr19 (2082790-2082578) | |
| 474-670, gnl|dasNov1|scaffold_62018 (40666-40878) | |
| 474-670, gnl|echTel1|scaffold_312232 (146937-146724) | |
| 474-670, gnl|fr1|chrUn (39725925-39725726) | |
| 474-670, gnl|galGal2|chrUn (96965852-96966060) | |
| 474-670, gnl|hg17|chr1 (147878726-147878938) | |
| 474-670, gnl|Hg17|chr1 (147878740-147878936) | |
| 474-670, gnl|loxAfr1|scaffold_493 (17301-17088) | |
| 474-670, gnl|mm7|chr3 (95077892-95077679) | |
| 474-670, gnl|Mm7|chr3 (95077875-95077679) | |
| 474-670, gnl|monDom2|scaffold_44 (4290632-4290845) | |
| 474-670, gnl|oryCun1|scaffold_98145 (1426-1214) | |
| 474-670, gnl|panTro1|chr1 (129613251-129613463) | |
| 474-670, gnl|rheMac2|chr1 (129509458-129509670) | |
| 474-670, gnl|rn3|chr2 (190071789-190071577) | |
| 474-670, gnl|tetNig1|chrUn_random (107779299-107779094) | |
| 474-670, gnl|xenTro1|scaffold_613 (637932-637715) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 37-201, gnl|bosTau2|chr3 (16504563-16504399) | |
| 37-201, gnl|canFam2|chr17 (63234276-63234475) | |
| 37-201, gnl|dasNov1|scaffold_13873 (45630-45431) | |
| 37-201, gnl|echTel1|scaffold_312232 (154044-153845) | |
| 37-201, gnl|hg17|chr1 (147856285-147856484) | |
| 37-201, gnl|Hg17|chr1 (147856322-147856486) | |
| 37-201, gnl|loxAfr1|scaffold_493 (24876-24680) | |
| 37-201, gnl|mm7|chr3 (95091734-95091539) | |
| 37-201, gnl|Mm7|chr3 (95091695-95091535) | |
| 37-201, gnl|monDom2|scaffold_44 (4282276-4282481) | |
| 37-201, gnl|oryCun1|scaffold_98145 (8984-8788) | |
| 37-201, gnl|panTro1|chr1 (129591459-129591658) | |
| 37-201, gnl|rheMac2|chr1 (129488100-129488299) | |
| 37-201, gnl|rn3|chr2 (190089468-190089274) | |
| 474-670, gnl|bosTau2|chr3 (16498613-16498417) | |
| 474-670, gnl|canFam2|chr17 (63241977-63242189) | |
| 474-670, gnl|danRer3|chr19 (2082790-2082578) | |
| 474-670, gnl|dasNov1|scaffold_62018 (40666-40878) | |
| 474-670, gnl|echTel1|scaffold_312232 (146937-146724) | |
| 474-670, gnl|fr1|chrUn (39725925-39725726) | |
| 474-670, gnl|galGal2|chrUn (96965852-96966060) | |
| 474-670, gnl|hg17|chr1 (147878726-147878938) | |
| 474-670, gnl|Hg17|chr1 (147878740-147878936) | |
| 474-670, gnl|loxAfr1|scaffold_493 (17301-17088) | |
| 474-670, gnl|mm7|chr3 (95077892-95077679) | |
| 474-670, gnl|Mm7|chr3 (95077875-95077679) | |
| 474-670, gnl|monDom2|scaffold_44 (4290632-4290845) | |
| 474-670, gnl|oryCun1|scaffold_98145 (1426-1214) | |
| 474-670, gnl|panTro1|chr1 (129613251-129613463) | |
| 474-670, gnl|rheMac2|chr1 (129509458-129509670) | |
| 474-670, gnl|rn3|chr2 (190071789-190071577) | |
| 474-670, gnl|tetNig1|chrUn_random (107779299-107779094) | |
| 474-670, gnl|xenTro1|scaffold_613 (637932-637715) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |