Non-Coding RNA Search

Ss1.1-Thy1-THY010088A10.5

Sequence:


               
               GTTTCCCTCTTGCCCTGTGCCAGCCTTGGGGTTCTGCCCCTTAGCTCCACCCCCAAAACC
TTCCCAGGGCTGCATCCCAGCAGCTCTGAGGGCACAGGATGGTGGACATGATTGCCAAGC
TGACCCGGAGGCAGAGTCGGGGCCTGCAGAGACAGGCGGACGACCCCCCGGAGCCAGTGT
ACGTGAACTTGGAGAGGCAGCCTCGGGCCACGTCGCCCCGCGCCACCGCGGCCCCCCTCC
CCAGCCCAGTGTGGGAGACGCACACGGACGCGGGCACCGGACGCCCCTACTACTACAACC
CCGACACGGGCGTGACCACCTGGGAGTCGCCCTTCGAGGCCGCCGAGGGCGCCGCCAGCC
CGGCCACCTCCCCCGCCTCGGTGGGCAGCCACGAGAGCCTCGAGACCGAGTGGGGCCAGT
ACTGGGATGAGGAGAGCCGCAGGGTCTTCTTCTACAACCCGCTGACGGGAGAGACGGCCT
GGGAGGACGAGTCTGAGGACCAGCCGGAAGACGAGCTGGAGATGCAGCCGGGCCTGAGCC
CAGGCAGCCCCCGGGACCAGAGGCCTCCTACCCCCGAGGCGGACTACCCTGAGTCCCTGA
CCAGTTACCCAGAGGAGGACTATTCCCCCGTGGGCTCCTTCAGTGAGCCCGGCCCCACCT
CGCCCTTGGTCATACCGCCAGGCTGGTCTTGCCACGTGAGCCCGGATGGCCAGACGCTGT
ACACCAACAACTTCACCCAAGAACAGTGGGTGAGGCTGGAGGACCAACTTGGGAAGCCTT
ACTTCTACAACACAGATGACGCCTCTGTTCAGTGGGAGCTGCCCCAGGTCCCTGTCCCTG
CCCCACGGAGCATTCGCAAATCCAGCCAGGACAGTGAGACACCAGCCCAGGCCAGCCCCC
CTGAGGAGAAGGGACGAGAAGGAATCAAGACCCTGGACAAGGCAGGCGTGCTCCATCGCA
CCAAGACAGTGGACAAGGGAAAGCGGCTCCGGAAGAAGCACTGGAGTGCCTCCTGGACAG
TGCTGGAGGGCGGCGTCCTGACATTCTTCAAGGACTCGAAGACCTCGGCTGCAGGCGGCC
TGAGGCAGCCTTCCAAGCTCTCCACCCCCGAGTACACAGTGGAGCTGAAGGGGGCCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTCCCTCTTGCCCTGTGCCAGCCTTGGGGTTCTGCCCCTTAGCTCCACCCCCAAAACC
TTCCCAGGGCTGCATCCCAGCAGCTCTGAGGGCACAGGATGGTGGACATGATTGCCAAGC
TGACCCGGAGGCAGAGTCGGGGCCTGCAGAGACAGGCGGACGACCCCCCGGAGCCAGTGT
ACGTGAACTTGGAGAGGCAGCCTCGGGCCACGTCGCCCCGCGCCACCGCGGCCCCCCTCC
CCAGCCCAGTGTGGGAGACGCACACGGACGCGGGCACCGGACGCCCCTACTACTACAACC
CCGACACGGGCGTGACCACCTGGGAGTCGCCCTTCGAGGCCGCCGAGGGCGCCGCCAGCC
CGGCCACCTCCCCCGCCTCGGTGGGCAGCCACGAGAGCCTCGAGACCGAGTGGGGCCAGT
ACTGGGATGAGGAGAGCCGCAGGGTCTTCTTCTACAACCCGCTGACGGGAGAGACGGCCT
GGGAGGACGAGTCTGAGGACCAGCCGGAAGACGAGCTGGAGATGCAGCCGGGCCTGAGCC
CAGGCAGCCCCCGGGACCAGAGGCCTCCTACCCCCGAGGCGGACTACCCTGAGTCCCTGA
CCAGTTACCCAGAGGAGGACTATTCCCCCGTGGGCTCCTTCAGTGAGCCCGGCCCCACCT
CGCCCTTGGTCATACCGCCAGGCTGGTCTTGCCACGTGAGCCCGGATGGCCAGACGCTGT
ACACCAACAACTTCACCCAAGAACAGTGGGTGAGGCTGGAGGACCAACTTGGGAAGCCTT
ACTTCTACAACACAGATGACGCCTCTGTTCAGTGGGAGCTGCCCCAGGTCCCTGTCCCTG
CCCCACGGAGCATTCGCAAATCCAGCCAGGACAGTGAGACACCAGCCCAGGCCAGCCCCC
CTGAGGAGAAGGGACGAGAAGGAATCAAGACCCTGGACAAGGCAGGCGTGCTCCATCGCA
CCAAGACAGTGGACAAGGGAAAGCGGCTCCGGAAGAAGCACTGGAGTGCCTCCTGGACAG
TGCTGGAGGGCGGCGTCCTGACATTCTTCAAGGACTCGAAGACCTCGGCTGCAGGCGGCC
TGAGGCAGCCTTCCAAGCTCTCCACCCCCGAGTACACAGTGGAGCTGAAGGGGGCCTCTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61879053|ref|XP_595121.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61879053|ref|XP_595121.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               632-746, gnl|bosTau2|chr19 (36934625-36934739)
               

               
               632-746, gnl|Hg17|chr17 (40838187-40838073)
               

               
               632-746, gnl|Mm7|chr11 (103448610-103448496)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               632-746, gnl|bosTau2|chr19 (36934625-36934739)
               

               
               632-746, gnl|Hg17|chr17 (40838187-40838073)
               

               
               632-746, gnl|Mm7|chr11 (103448610-103448496)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nje (0.16592)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)

	632-746, gnl\|bosTau2\|chr19 (36934625-36934739)
	632-746, gnl\|Hg17\|chr17 (40838187-40838073)
	632-746, gnl\|Mm7\|chr11 (103448610-103448496)