Ss1.1-Thy1-THY010088G09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATATTTTAGGAAGTGTATGGGAATTTTGCCTCCAGGAACTTTTGTAACAGCCAAAGACT GAACTGGAAACTCGCACAGCCAAGACTCAGAAGACAGTCTTCCTTTGGCACTTGACTTTG GATTCTGGTCGCCCACTTTTTAAAGCACTAAGCGGTCGGCTGTTAAGAGCCCTGCCGGGG TCTGAGGCCAATCGGCAGAACTAGAACTTTCCCCATCCTGGACTGTTAGTAACTTAGTCT CTCCCCCTCCCCCAGCTACCCCGCCCCCCGCCTTCAGAAGAGGGTGCCTTTTCAGGAGGA AGCGATGGCTTCAGACAACATATTTGAGTCATTTCCTTCATACTCACAGTGCTTCATGAG AGAATGTGTACACGGAATGAATCCACCTAGAGATGTCCACGATGCCAGCACGAGCCGCCG CTTCACGCCGCCTTCCACCGCGCTGAGCCCGGGCAAGATGAGCGAGGCGCTGCCGCTGGG CGCCCCGGACGCCAGCGCCGCCCTGGCCGGCAAGCTGAGGAGCGGCGACCGCAGCATGGT GGAGGTGCTGGCCGACCACCCCGGCGAGCTGGTGCGCACCGACAGTCCCAACTTCCTCTG CTCTGTGCTGCCCACGCACTGGCGCTGCAACAAGACCCTGCCCATCGCTTTCAAGGTGGT GGCTCTGGGGGACGTTCCAGATGGCACTCTGGTCACTGTGATGGCAGGCAATGGCGAAAA CTACTCAGCTGAACTGAGAAATGCAACTGCAGCCATGAAAAACCAAGTTGCAAGATTCAA TGACCTCAGGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATATTTTAGGAAGTGTATGGGAATTTTGCCTCCAGGAACTTTTGTAACAGCCAAAGACT GAACTGGAAACTCGCACAGCCAAGACTCAGAAGACAGTCTTCCTTTGGCACTTGACTTTG GATTCTGGTCGCCCACTTTTTAAAGCACTAAGCGGTCGGCTGTTAAGAGCCCTGCCGGGG TCTGAGGCCAATCGGCAGAACTAGAACTTTCCCCATCCTGGACTGTTAGTAACTTAGTCT CTCCCCCTCCCCCAGCTACCCCGCCCCCCGCCTTCAGAAGAGGGTGCCTTTTCAGGAGGA AGCGATGGCTTCAGACAACATATTTGAGTCATTTCCTTCATACTCACAGTGCTTCATGAG AGAATGTGTACACGGAATGAATCCACCTAGAGATGTCCACGATGCCAGCACGAGCCGCCG CTTCACGCCGCCTTCCACCGCGCTGAGCCCGGGCAAGATGAGCGAGGCGCTGCCGCTGGG CGCCCCGGACGCCAGCGCCGCCCTGGCCGGCAAGCTGAGGAGCGGCGACCGCAGCATGGT GGAGGTGCTGGCCGACCACCCCGGCGAGCTGGTGCGCACCGACAGTCCCAACTTCCTCTG CTCTGTGCTGCCCACGCACTGGCGCTGCAACAAGACCCTGCCCATCGCTTTCAAGGTGGT GGCTCTGGGGGACGTTCCAGATGGCACTCTGGTCACTGTGATGGCAGGCAATGGCGAAAA CTACTCAGCTGAACTGAGAAATGCAACTGCAGCCATGAAAAACCAAGTTGCAAGATTCAA TGACCTCAGGTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-260, gnl|bosTau2|chr1 (95841813-95842068) | |
| 1-260, gnl|Hg17|chr21 (35181650-35181414) | |
| 1-260, gnl|Mm7|chr16 (92750301-92750066) | |
| 265-373, gnl|bosTau2|chr1 (95667588-95667695) | |
| 265-373, gnl|Hg17|chr21 (35343106-35342999) | |
| 265-373, gnl|Mm7|chr16 (92884097-92883991) | |
| 401-657, gnl|bosTau2|chr1 (95842209-95842465) | |
| 401-657, gnl|canFam2|chr31 (32378990-32379248) | |
| 401-657, gnl|danRer3|chrNA (159981814-159982061) | |
| 401-657, gnl|echTel1|scaffold_308257 (15243-14986) | |
| 401-657, gnl|fr1|chrUn (87991685-87991935) | |
| 401-657, gnl|galGal2|chr1 (99807008-99807265) | |
| 401-657, gnl|hg17|chr21 (35180993-35181250) | |
| 401-657, gnl|Hg17|chr21 (35181264-35181008) | |
| 401-657, gnl|loxAfr1|scaffold_10310 (83138-83396) | |
| 401-657, gnl|mm7|chr16 (92749652-92749911) | |
| 401-657, gnl|Mm7|chr16 (92749925-92749669) | |
| 401-657, gnl|monDom2|scaffold_29 (12517807-12517532) | |
| 401-657, gnl|oryCun1|scaffold_203452 (11764-12023) | |
| 401-657, gnl|panTro1|chr22 (35176914-35177171) | |
| 401-657, gnl|rheMac2|chr3 (11686235-11685978) | |
| 401-657, gnl|rn3|chr11 (32780960-32781219) | |
| 401-657, gnl|tetNig1|chr3 (2824180-2824507) | |
| 401-657, gnl|xenTro1|scaffold_497 (659388-659137) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-260, gnl|bosTau2|chr1 (95841813-95842068) | |
| 1-260, gnl|Hg17|chr21 (35181650-35181414) | |
| 1-260, gnl|Mm7|chr16 (92750301-92750066) | |
| 265-373, gnl|bosTau2|chr1 (95667588-95667695) | |
| 265-373, gnl|Hg17|chr21 (35343106-35342999) | |
| 265-373, gnl|Mm7|chr16 (92884097-92883991) | |
| 401-657, gnl|bosTau2|chr1 (95842209-95842465) | |
| 401-657, gnl|canFam2|chr31 (32378990-32379248) | |
| 401-657, gnl|danRer3|chrNA (159981814-159982061) | |
| 401-657, gnl|echTel1|scaffold_308257 (15243-14986) | |
| 401-657, gnl|fr1|chrUn (87991685-87991935) | |
| 401-657, gnl|galGal2|chr1 (99807008-99807265) | |
| 401-657, gnl|hg17|chr21 (35180993-35181250) | |
| 401-657, gnl|Hg17|chr21 (35181264-35181008) | |
| 401-657, gnl|loxAfr1|scaffold_10310 (83138-83396) | |
| 401-657, gnl|mm7|chr16 (92749652-92749911) | |
| 401-657, gnl|Mm7|chr16 (92749925-92749669) | |
| 401-657, gnl|monDom2|scaffold_29 (12517807-12517532) | |
| 401-657, gnl|oryCun1|scaffold_203452 (11764-12023) | |
| 401-657, gnl|panTro1|chr22 (35176914-35177171) | |
| 401-657, gnl|rheMac2|chr3 (11686235-11685978) | |
| 401-657, gnl|rn3|chr11 (32780960-32781219) | |
| 401-657, gnl|tetNig1|chr3 (2824180-2824507) | |
| 401-657, gnl|xenTro1|scaffold_497 (659388-659137) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |