Ss1.1-Thy1-THY010091H11.5
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GGGCGGTCGCGCAGGCAGCGGCTGCGGGAAGTCGGACACTGGGCATCATGTATTACAAGT
TTAGTGGCTTTACGCAGAAGTTGACGGGAGCATGGGCTTCCGACGCGTATAGCCCTCAGG
GATTAAGGCCTCTGGTTTCCACAGAAGCACCACCTATCATATTTGCCACACCAACTAAAC
TGAGTTCCAGTTCTACTGCATATGATTATGCCGGGAAAAACAAAGTTCCAGAGCTGCAAA
AGTTTTTCCAGAGAACCGACGGTGTGCCCATCCACCTGAAACGAGGCCTGCCTGACCAAA
TGCTTTACCGGACCACCATGGCGCTGACAGTGGGAGGGACCATCTACTGCCTGATTGCCC
TCTACATGGCATCACAGCCCAGAAACAAATGAGTTAGCCTGCAGAGGACTCGTTTGCTTT
TTGGCAGTAAATCCTTTGAATTTTTATTTTTCATTATTTCTGTACAATTGTTTCCTTGTT
TTTTTTTTTTTTTTACATGAATGGCCTATTTAACATCTTTAAAAAAAAACAAAGATATTA
AGACAATATTTTGGTTTGTTTATTAAATGCACTTAGCCTATGAGAGCTCATTCAAAAGTT
AAAAAACTGTTGTTTAAAGAAATGCTGCTGCTCTCCGATTTTGGGCTTCTGATTTCCCTG
GAGGTTCTGAATGAAGGTTGCACACAGGCTCATTAACAGCAGTCTGTGCTAAGGTCCTTA
GGGACTTATGGTGGAGTTTTGAGCGTGGGGTGCAGAAGCCTTTCTGGATTTGGATGTGAC
TGAGGAAGGAAGACAGAAGCCAAGGCCAGGCTCATGAAATGAGAATTAGTGGTCACCTTA
GGGATTTTTCCATCTTGCTGTAAAATGTTAATAGAAATTATTTGCAGCCCGCCTCTGTTC
ATTGGGCAGTTCGTTTAAAAGGGTTATTTGCACCATCTCAGATCTTTAGTGAAATTTTAT
GTGTGATTTTTATGTATTTATTCCGCCATGGGAACAGAGAACACCTGTTTAGTGTTGCGC
TTTAGACCAGTGTCTGTCCTATTAATTCAGCTCCGACACAGATTCTCCTTTACCTTTTAA
AAATGTTATGGCTTTAAATTATGATTTATTTTAATTGTGGAATAAATACATGAATGAAAA
AAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGGCGGTCGCGCAGGCAGCGGCTGCGGGAAGTCGGACACTGGGCATCATGTATTACAAGT
TTAGTGGCTTTACGCAGAAGTTGACGGGAGCATGGGCTTCCGACGCGTATAGCCCTCAGG
GATTAAGGCCTCTGGTTTCCACAGAAGCACCACCTATCATATTTGCCACACCAACTAAAC
TGAGTTCCAGTTCTACTGCATATGATTATGCCGGGAAAAACAAAGTTCCAGAGCTGCAAA
AGTTTTTCCAGAGAACCGACGGTGTGCCCATCCACCTGAAACGAGGCCTGCCTGACCAAA
TGCTTTACCGGACCACCATGGCGCTGACAGTGGGAGGGACCATCTACTGCCTGATTGCCC
TCTACATGGCATCACAGCCCAGAAACAAATGAGTTAGCCTGCAGAGGACTCGTTTGCTTT
TTGGCAGTAAATCCTTTGAATTTTTATTTTTCATTATTTCTGTACAATTGTTTCCTTGTT
TTTTTTTTTTTTTTACATGAATGGCCTATTTAACATCTTTAAAAAAAAACAAAGATATTA
AGACAATATTTTGGTTTGTTTATTAAATGCACTTAGCCTATGAGAGCTCATTCAAAAGTT
AAAAAACTGTTGTTTAAAGAAATGCTGCTGCTCTCCGATTTTGGGCTTCTGATTTCCCTG
GAGGTTCTGAATGAAGGTTGCACACAGGCTCATTAACAGCAGTCTGTGCTAAGGTCCTTA
GGGACTTATGGTGGAGTTTTGAGCGTGGGGTGCAGAAGCCTTTCTGGATTTGGATGTGAC
TGAGGAAGGAAGACAGAAGCCAAGGCCAGGCTCATGAAATGAGAATTAGTGGTCACCTTA
GGGATTTTTCCATCTTGCTGTAAAATGTTAATAGAAATTATTTGCAGCCCGCCTCTGTTC
ATTGGGCAGTTCGTTTAAAAGGGTTATTTGCACCATCTCAGATCTTTAGTGAAATTTTAT
GTGTGATTTTTATGTATTTATTCCGCCATGGGAACAGAGAACACCTGTTTAGTGTTGCGC
TTTAGACCAGTGTCTGTCCTATTAATTCAGCTCCGACACAGATTCTCCTTTACCTTTTAA
AAATGTTATGGCTTTAAATTATGATTTATTTTAATTGTGGAATAAATACATGAATGAAAA
AAAAAAAAAAAA
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1-120, gnl|bosTau2|chr11 (15304870-15304988) |
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1-120, gnl|canFam2|chr17 (37083513-37083611) |
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1-120, gnl|danRer3|chr12 (23151852-23151753) |
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1-120, gnl|dasNov1|scaffold_102839 (4363-4461) |
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1-120, gnl|echTel1|scaffold_287468 (43875-43973) |
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1-120, gnl|fr1|chrUn (283064200-283064082) |
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1-120, gnl|hg17|chr2 (42499856-42499954) |
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1-120, gnl|Hg17|chr2 (42499999-42499880) |
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1-120, gnl|loxAfr1|scaffold_4082 (34285-34187) |
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1-120, gnl|mm7|chr17 (81808626-81808723) |
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1-120, gnl|Mm7|chr17 (81808767-81808649) |
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1-120, gnl|monDom2|scaffold_1 (472433-472531) |
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1-120, gnl|oryCun1|scaffold_203610 (5636-5734) |
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1-120, gnl|panTro1|chr12 (44096123-44096221) |
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1-120, gnl|rheMac2|chr13 (42467993-42468091) |
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1-120, gnl|rn3|chr6 (6861498-6861595) |
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1-120, gnl|xenTro1|scaffold_30 (954077-954165) |
| |
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245-1142, gnl|bosTau2|chr11 (15316306-15317180) |
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245-1142, gnl|Hg17|chr2 (42490157-42489293) |
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245-1142, gnl|Mm7|chr17 (81797190-81796369) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-120, gnl|bosTau2|chr11 (15304870-15304988) |
|
1-120, gnl|canFam2|chr17 (37083513-37083611) |
|
1-120, gnl|danRer3|chr12 (23151852-23151753) |
|
1-120, gnl|dasNov1|scaffold_102839 (4363-4461) |
|
1-120, gnl|echTel1|scaffold_287468 (43875-43973) |
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1-120, gnl|fr1|chrUn (283064200-283064082) |
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1-120, gnl|hg17|chr2 (42499856-42499954) |
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1-120, gnl|Hg17|chr2 (42499999-42499880) |
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1-120, gnl|loxAfr1|scaffold_4082 (34285-34187) |
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1-120, gnl|mm7|chr17 (81808626-81808723) |
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1-120, gnl|Mm7|chr17 (81808767-81808649) |
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1-120, gnl|monDom2|scaffold_1 (472433-472531) |
|
1-120, gnl|oryCun1|scaffold_203610 (5636-5734) |
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1-120, gnl|panTro1|chr12 (44096123-44096221) |
|
1-120, gnl|rheMac2|chr13 (42467993-42468091) |
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1-120, gnl|rn3|chr6 (6861498-6861595) |
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1-120, gnl|xenTro1|scaffold_30 (954077-954165) |
| |
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245-1142, gnl|bosTau2|chr11 (15316306-15317180) |
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245-1142, gnl|Hg17|chr2 (42490157-42489293) |
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245-1142, gnl|Mm7|chr17 (81797190-81796369) |
|
sin (0.874738) |
|
elu (0.770713) |
|
gul (0.710353) |
|
eye (0.682012) |
|
cki (0.660939) |
|
hea (0.613497) |
|
fat (0.58971) |
|
fbs (0.526039) |
|
mcp (0.511945) |
|
eje (0.494169) |
|
cbe (0.478469) |
|
csk (0.422238) |
|
amn (0.417711) |
|
fli (0.405762) |
|
nlu (0.383362) |
|
bla (0.373042) |
|
mgm (0.360685) |
|
ton (0.351) |
|
ecc (0.345105) |
|
spc (0.340097) |
|
vin (0.332557) |
|
nje (0.33184) |
|
cag (0.302389) |
|
lin (0.291206) |
|
spl (0.286369) |
|
nmm (0.265604) |
|
ute (0.265569) |
|
thg (0.253582) |
|
ese (0.253004) |
|
eru (0.240096) |
|
pgl (0.236967) |
|
ebs (0.236602) |
|
ece (0.229305) |
|
nms (0.213858) |
|
cty (0.20816) |
|
sag (0.182715) |
|
rec (0.17307) |
|
cut (0.169924) |
|
fhi (0.169578) |
|
nco (0.161734) |
|
mga (0.160205) |
|
fco (0.157208) |
|
lun (0.150489) |
|
isp (0.150376) |
|
ski (0.146735) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
che (0.136314) |
|
ste (0.135208) |
|
pla (0.133672) |
|
kid (0.129735) |
|
ova (0.129132) |
|
ret (0.128733) |
|
sug (0.127291) |
|
tra (0.123092) |
|
med (0.116252) |
|
cbl (0.114797) |
|
sin (0.874738) |
|
elu (0.770713) |
|
gul (0.710353) |
|
eye (0.682012) |
|
cki (0.660939) |
|
hea (0.613497) |
|
fat (0.58971) |
|
fbs (0.526039) |
|
mcp (0.511945) |
|
eje (0.494169) |
|
cbe (0.478469) |
|
csk (0.422238) |
|
amn (0.417711) |
|
fli (0.405762) |
|
nlu (0.383362) |
|
bla (0.373042) |
|
mgm (0.360685) |
|
ton (0.351) |
|
ecc (0.345105) |
|
spc (0.340097) |
|
vin (0.332557) |
|
nje (0.33184) |
|
cag (0.302389) |
|
lin (0.291206) |
|
spl (0.286369) |
|
nmm (0.265604) |
|
ute (0.265569) |
|
thg (0.253582) |
|
ese (0.253004) |
|
eru (0.240096) |
|
pgl (0.236967) |
|
ebs (0.236602) |
|
ece (0.229305) |
|
nms (0.213858) |
|
cty (0.20816) |
|
sag (0.182715) |
|
rec (0.17307) |
|
cut (0.169924) |
|
fhi (0.169578) |
|
nco (0.161734) |
|
mga (0.160205) |
|
fco (0.157208) |
|
lun (0.150489) |
|
isp (0.150376) |
|
ski (0.146735) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
nca (0.136874) |
|
che (0.136314) |
|
ste (0.135208) |
|
pla (0.133672) |
|
kid (0.129735) |
|
ova (0.129132) |
|
ret (0.128733) |
|
sug (0.127291) |
|
tra (0.123092) |
|
med (0.116252) |
|
cbl (0.114797) |
