Ss1.1-Thy1-THY010096B07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATAGAAACAGGGTCGGAGTGAGAACCACACGCAAGCCCAAACGATGGAGGAGCAGAAAA GCCCTGAGTAAGCAGAGAGAGTTGGTCCACAGAGGCAATGGAGCAGCCACACCGAGAGCA GTGCAGCCTGGAGAACATGCAGCCCCAGGGGGAGAGGTGGAGAGAGAGAGCGGCCGCCTA AGAGGCTGATGGCTTCCCTGTTCCTGGCTCCAGCCCCCGTGCGTCCTGGCTACATATCCT TCCCGGTGTTCAAGAAGGCGAGCCCCAATGGAAAGCTCACCGTCTACCTGGGAAAGAGGG ACTTCGTGGACCACATCGACCTTGTGGACCCCGTGGATGGCGTGGTCCTGGTGGATCCTG AGTATCTCAAGGAGAGGAGAGTCTACGTGACGCTGACCTGCGCCTTCCGATACGGCCGGG AGGACCTGGATGTCCTGGGCCTGACCTTTCGCAAGGACCTGTTTGTGGCCAACGTGCAGT CCTTCCCGCCGGCCCCCGAGGACAAGAAGCCCCTGACGCGGCTGCAGGAGCGCCTCATCA AGAAGCTGGGCGAGCACGCCTACCCTTTCACCTTTGAGATCCCTCCGAACCTCCCATGCT CTGTGACGTTGCAGCCGGGGCCTGAAGACACAGGGAAGGCCTGCGGTGTGGACTACGAAG TAAAAGCCTTCTGTGCGGAGAACCTGGAGGAGAAGATCCACAAGCGGAACTCCGTGCGTC TGGTCATCCGGAAGGTGCAGTATGCCCCGGAGAGGCCCGGCCCCCAGCCCACCGCCGAGA CCACCAGGCAGTTCCTCATGTCAGACAAGCCCTTGCATCTAGAGGCTTCCCTGGATAAGG AGATCTACTACCACGGAGAGCCCATCAGCGTCAATGTCCACGTCACCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATAGAAACAGGGTCGGAGTGAGAACCACACGCAAGCCCAAACGATGGAGGAGCAGAAAA GCCCTGAGTAAGCAGAGAGAGTTGGTCCACAGAGGCAATGGAGCAGCCACACCGAGAGCA GTGCAGCCTGGAGAACATGCAGCCCCAGGGGGAGAGGTGGAGAGAGAGAGCGGCCGCCTA AGAGGCTGATGGCTTCCCTGTTCCTGGCTCCAGCCCCCGTGCGTCCTGGCTACATATCCT TCCCGGTGTTCAAGAAGGCGAGCCCCAATGGAAAGCTCACCGTCTACCTGGGAAAGAGGG ACTTCGTGGACCACATCGACCTTGTGGACCCCGTGGATGGCGTGGTCCTGGTGGATCCTG AGTATCTCAAGGAGAGGAGAGTCTACGTGACGCTGACCTGCGCCTTCCGATACGGCCGGG AGGACCTGGATGTCCTGGGCCTGACCTTTCGCAAGGACCTGTTTGTGGCCAACGTGCAGT CCTTCCCGCCGGCCCCCGAGGACAAGAAGCCCCTGACGCGGCTGCAGGAGCGCCTCATCA AGAAGCTGGGCGAGCACGCCTACCCTTTCACCTTTGAGATCCCTCCGAACCTCCCATGCT CTGTGACGTTGCAGCCGGGGCCTGAAGACACAGGGAAGGCCTGCGGTGTGGACTACGAAG TAAAAGCCTTCTGTGCGGAGAACCTGGAGGAGAAGATCCACAAGCGGAACTCCGTGCGTC TGGTCATCCGGAAGGTGCAGTATGCCCCGGAGAGGCCCGGCCCCCAGCCCACCGCCGAGA CCACCAGGCAGTTCCTCATGTCAGACAAGCCCTTGCATCTAGAGGCTTCCCTGGATAAGG AGATCTACTACCACGGAGAGCCCATCAGCGTCAATGTCCACGTCACCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 3-245, gnl|bosTau2|chr15 (34953296-34953054) | |
| 3-245, gnl|canFam2|chr21 (26277196-26276546) | |
| 3-245, gnl|dasNov1|scaffold_125115 (436-1072) | |
| 3-245, gnl|echTel1|scaffold_287325 (6424-7059) | |
| 3-245, gnl|hg17|chr11 (74682249-74682923) | |
| 3-245, gnl|Hg17|chr11 (74682703-74682468) | |
| 3-245, gnl|mm7|chr7 (95610835-95610207) | |
| 3-245, gnl|Mm7|chr7 (95610408-95610651) | |
| 3-245, gnl|panTro1|chr9_random (35568595-35569269) | |
| 3-245, gnl|rheMac2|chr14 (73457711-73458361) | |
| 3-245, gnl|rn3|chr1 (156994378-156993761) | |
| 380-581, gnl|bosTau2|chr15 (34944336-34944135) | |
| 380-581, gnl|canFam2|chr21 (26286137-26285993) | |
| 380-581, gnl|danRer3|chr15 (40148-40289) | |
| 380-581, gnl|dasNov1|scaffold_63901 (4757-4895) | |
| 380-581, gnl|echTel1|scaffold_163752 (5285-5399) | |
| 380-581, gnl|fr1|chrUn (146842444-146842214) | |
| 380-581, gnl|galGal2|chr4 (540065-540216) | |
| 380-581, gnl|hg17|chr11 (74671964-74672107) | |
| 380-581, gnl|Hg17|chr11 (74672177-74671976) | |
| 380-581, gnl|loxAfr1|scaffold_106135 (1305-1173) | |
| 380-581, gnl|mm7|chr7 (95619001-95618861) | |
| 380-581, gnl|Mm7|chr7 (95618789-95618990) | |
| 380-581, gnl|monDom2|scaffold_74 (1599293-1599153) | |
| 380-581, gnl|oryCun1|scaffold_186685 (11491-11345) | |
| 380-581, gnl|panTro1|chr9 (75954977-75955120) | |
| 380-581, gnl|rheMac2|chr14 (73446950-73447093) | |
| 380-581, gnl|rn3|chr1 (157002948-157002808) | |
| 380-581, gnl|tetNig1|chrUn_random (135755767-135755628) | |
| 380-581, gnl|xenTro1|scaffold_952 (377569-377440) | |
| 706-842, gnl|bosTau2|chr15 (34938760-34938624) | |
| 706-842, gnl|Hg17|chr11 (74667437-74667301) | |
| 706-842, gnl|Mm7|chr7 (95622055-95622191) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-245, gnl|bosTau2|chr15 (34953296-34953054) | |
| 3-245, gnl|canFam2|chr21 (26277196-26276546) | |
| 3-245, gnl|dasNov1|scaffold_125115 (436-1072) | |
| 3-245, gnl|echTel1|scaffold_287325 (6424-7059) | |
| 3-245, gnl|hg17|chr11 (74682249-74682923) | |
| 3-245, gnl|Hg17|chr11 (74682703-74682468) | |
| 3-245, gnl|mm7|chr7 (95610835-95610207) | |
| 3-245, gnl|Mm7|chr7 (95610408-95610651) | |
| 3-245, gnl|panTro1|chr9_random (35568595-35569269) | |
| 3-245, gnl|rheMac2|chr14 (73457711-73458361) | |
| 3-245, gnl|rn3|chr1 (156994378-156993761) | |
| 380-581, gnl|bosTau2|chr15 (34944336-34944135) | |
| 380-581, gnl|canFam2|chr21 (26286137-26285993) | |
| 380-581, gnl|danRer3|chr15 (40148-40289) | |
| 380-581, gnl|dasNov1|scaffold_63901 (4757-4895) | |
| 380-581, gnl|echTel1|scaffold_163752 (5285-5399) | |
| 380-581, gnl|fr1|chrUn (146842444-146842214) | |
| 380-581, gnl|galGal2|chr4 (540065-540216) | |
| 380-581, gnl|hg17|chr11 (74671964-74672107) | |
| 380-581, gnl|Hg17|chr11 (74672177-74671976) | |
| 380-581, gnl|loxAfr1|scaffold_106135 (1305-1173) | |
| 380-581, gnl|mm7|chr7 (95619001-95618861) | |
| 380-581, gnl|Mm7|chr7 (95618789-95618990) | |
| 380-581, gnl|monDom2|scaffold_74 (1599293-1599153) | |
| 380-581, gnl|oryCun1|scaffold_186685 (11491-11345) | |
| 380-581, gnl|panTro1|chr9 (75954977-75955120) | |
| 380-581, gnl|rheMac2|chr14 (73446950-73447093) | |
| 380-581, gnl|rn3|chr1 (157002948-157002808) | |
| 380-581, gnl|tetNig1|chrUn_random (135755767-135755628) | |
| 380-581, gnl|xenTro1|scaffold_952 (377569-377440) | |
| 706-842, gnl|bosTau2|chr15 (34938760-34938624) | |
| 706-842, gnl|Hg17|chr11 (74667437-74667301) | |
| 706-842, gnl|Mm7|chr7 (95622055-95622191) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pty (0.142714) |