Non-Coding RNA Search

Ss1.1-Thy1-THY010096F02.5

Sequence:


               
               CAATAATGGTGC------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGAAAACCACAA
TTCAAAAGATACATCCACCCCAGATGTGGAGGTTCCTCAAAAAAACTAAAAACTGAACTA
CCATATGATCCAGAGAAACCAGTCCTGGGCATCTCTCTATCCATAGAAAACCACAATTCA
AAAGATACATCGCAGCACTATCTGCAATAGCCAAGACATGGAAGCAACTTAAATGTCCAT
CAACAGAGGAATGGATGAAGATGATGCGGTTCATATACACAATGGAATATTACTCAGCCA
TTAAAAAGAAAAAACCCCACCATTTGCAGCAACATGGATGGATGTAGAGATTATTATACT
AAGTGAACTTAGACAATGAAAGACAAACATCATGATATCACTTTTATGTGGAATCTTAAA
AAAAAAAAGGATACAGATGAACTTATTTACAGGACAGAAACAGACTCACAGACTTTGAAA
ACAAACTTATAGTTACCAAAGGAGACAGGTGGTGGGGGCAGGGAATGGACTGGGGGTTTG
GGTTTGGCAGGTACACACTGGTATATGGAATGACTGGCCAACGGTGGACCTGCTGTACAG
CACAGAGAACTCTACCCAATATTCTGTGATGGTCTATATGGGAAAAGAATCTGGAAACGA
ATGGACATGTGTACATGTATAATGATTAATTTGTCATACAGCAGAGATTATCACAACATT
GTAAATCAACTATACTTCAATAAAATTTTAAAAGTGAAAAAAAAGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATAATGGTGC------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGAAAACCACAA
TTCAAAAGATACATCCACCCCAGATGTGGAGGTTCCTCAAAAAAACTAAAAACTGAACTA
CCATATGATCCAGAGAAACCAGTCCTGGGCATCTCTCTATCCATAGAAAACCACAATTCA
AAAGATACATCGCAGCACTATCTGCAATAGCCAAGACATGGAAGCAACTTAAATGTCCAT
CAACAGAGGAATGGATGAAGATGATGCGGTTCATATACACAATGGAATATTACTCAGCCA
TTAAAAAGAAAAAACCCCACCATTTGCAGCAACATGGATGGATGTAGAGATTATTATACT
AAGTGAACTTAGACAATGAAAGACAAACATCATGATATCACTTTTATGTGGAATCTTAAA
AAAAAAAAGGATACAGATGAACTTATTTACAGGACAGAAACAGACTCACAGACTTTGAAA
ACAAACTTATAGTTACCAAAGGAGACAGGTGGTGGGGGCAGGGAATGGACTGGGGGTTTG
GGTTTGGCAGGTACACACTGGTATATGGAATGACTGGCCAACGGTGGACCTGCTGTACAG
CACAGAGAACTCTACCCAATATTCTGTGATGGTCTATATGGGAAAAGAATCTGGAAACGA
ATGGACATGTGTACATGTATAATGATTAATTTGTCATACAGCAGAGATTATCACAACATT
GTAAATCAACTATACTTCAATAAAATTTTAAAAGTGAAAAAAAAGGAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               23-576, gnl|bosTau2|chr1 (99837577-99837012)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-576, gnl|bosTau2|chr1 (99837577-99837012)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               lyg (0.133103)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)
               

               
               thg (0.126791)