Non-Coding RNA Search

Ss1.1-Thy1-THY010098A10.5

Sequence:


               
               AATAGCTATAATTCATATGGAAGA------------------------------------
------------------------------------------------------------
------------AAAAAAAATTGAAAAATTGCCATTTGCAGCAATATGGATGGACCTAGA
GAATATCATACCAAGCGAAGCAAGTCAGAGAAAGACAAACATTATATGGTATCACTTATA
TGTAGAATCTAAAAAATAGTACAAATGAATCTGTTTATAAAACAGAAGCAGACTCATAGA
CAGAAAACAAACTTAGGGTTACCAAAGGAGAAAGGTGGGGAGGGATGAATTAGTGTAGGA
TTAACAAATGCACACTACCGGAGTTCCCATCGTGCATCAGTGGTTAACGAATCTGATTAG
GAGCCATGAGGTTGCGGGTTCCATCCCTGGCCTCGCTCAGTGGGTTAAGGATCTGGCATT
GCCTTGAGCTATGGTGTAGGTCGCAGACACGGCTCGGATCCCAAGTTGCTGTGGCTGTGG
CGTAGGCTGGCGGCTACAGCTCTGATTAGACCCCTAGCCTGAGAACCTCCATATGCCCTG
GGTGTGGCCCTAAAAAGACAAAAAGACCAAAAATAAAAATGAAAAAAAAAAGTGTTAATG
CAGTAAGAAGATATAATGGTTATGAACATTTACACACCTAATGACAAACCAGCATGTATT
TATGAAGCAAAAACTGACAGAATTGAAGGGAGAAGTAGATGTTCAAGTAGACTTTTAATA
CCTCACTCACTGTAGTGGATAGACCATCCAGACAGAAGATAAGGAAATAGAGAACTTATA
TAATAAACCAACTAGACTAAGAGACATATATAGAACACTCAAACCACAGCAACAGTACAC
AAAGCACATTTTCCAGGATAGACCATATGTTAGGCCACACAAATTAAGTCTTTTTTTTTT
TTTTTCGGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATAGCTATAATTCATATGGAAGA------------------------------------
------------------------------------------------------------
------------AAAAAAAATTGAAAAATTGCCATTTGCAGCAATATGGATGGACCTAGA
GAATATCATACCAAGCGAAGCAAGTCAGAGAAAGACAAACATTATATGGTATCACTTATA
TGTAGAATCTAAAAAATAGTACAAATGAATCTGTTTATAAAACAGAAGCAGACTCATAGA
CAGAAAACAAACTTAGGGTTACCAAAGGAGAAAGGTGGGGAGGGATGAATTAGTGTAGGA
TTAACAAATGCACACTACCGGAGTTCCCATCGTGCATCAGTGGTTAACGAATCTGATTAG
GAGCCATGAGGTTGCGGGTTCCATCCCTGGCCTCGCTCAGTGGGTTAAGGATCTGGCATT
GCCTTGAGCTATGGTGTAGGTCGCAGACACGGCTCGGATCCCAAGTTGCTGTGGCTGTGG
CGTAGGCTGGCGGCTACAGCTCTGATTAGACCCCTAGCCTGAGAACCTCCATATGCCCTG
GGTGTGGCCCTAAAAAGACAAAAAGACCAAAAATAAAAATGAAAAAAAAAAGTGTTAATG
CAGTAAGAAGATATAATGGTTATGAACATTTACACACCTAATGACAAACCAGCATGTATT
TATGAAGCAAAAACTGACAGAATTGAAGGGAGAAGTAGATGTTCAAGTAGACTTTTAATA
CCTCACTCACTGTAGTGGATAGACCATCCAGACAGAAGATAAGGAAATAGAGAACTTATA
TAATAAACCAACTAGACTAAGAGACATATATAGAACACTCAAACCACAGCAACAGTACAC
AAAGCACATTTTCCAGGATAGACCATATGTTAGGCCACACAAATTAAGTCTTTTTTTTTT
TTTTTCGGTTTT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               11-243, gnl|bosTau2|chr1 (87216219-87216452)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-243, gnl|bosTau2|chr1 (87216219-87216452)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               spc (0.113366)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.113366)