Non-Coding RNA Search

Ss1.1-Thy1-THY010101A02.5

Sequence:


               
               CCCCAAAGAATCAGAGCTATACACAGCCCCAAATTTGGTGACTGTGGGACTCAATTCCCA
GTGAAAAACTGCTAACTTTTTGTGAGATAGGTAAGAATTTCGCTTTAAATTGTGGTATTA
TTACTTGGTGAAAAATGGGAAAGTGCTGCTGAAATGGGATTGGTGTGTTATTTTTTGGTT
GTCGTGTTATTACAGAAAAACACACAATTTTAACCATTCTCATTTACCCCTCCCCCACCC
TCTTTCTATAGTATGCTCCTATTACAATCACTCTGTGTGTGTGTGTGGCTTTTCTTTCTT
TCTTTCTTTCTTTCTTTTTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------TTTTCTTAGCAA
AAAAATTTTAACACTTGAGCCTTGGATCTTTCACCCTGGTGACTGTCAAGTCCAAGGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCAAAGAATCAGAGCTATACACAGCCCCAAATTTGGTGACTGTGGGACTCAATTCCCA
GTGAAAAACTGCTAACTTTTTGTGAGATAGGTAAGAATTTCGCTTTAAATTGTGGTATTA
TTACTTGGTGAAAAATGGGAAAGTGCTGCTGAAATGGGATTGGTGTGTTATTTTTTGGTT
GTCGTGTTATTACAGAAAAACACACAATTTTAACCATTCTCATTTACCCCTCCCCCACCC
TCTTTCTATAGTATGCTCCTATTACAATCACTCTGTGTGTGTGTGTGGCTTTTCTTTCTT
TCTTTCTTTCTTTCTTTTTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------TTTTCTTAGCAA
AAAAATTTTAACACTTGAGCCTTGGATCTTTCACCCTGGTGACTGTCAAGTCCAAGGCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-282, gnl|bosTau2|chr5 (33700029-33700328)
               

               
               1-282, gnl|Hg17|chr9 (33103199-33102916)
               

               
               1-282, gnl|Mm7|chr4 (40945395-40945131)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-282, gnl|bosTau2|chr5 (33700029-33700328)
               

               
               1-282, gnl|Hg17|chr9 (33103199-33102916)
               

               
               1-282, gnl|Mm7|chr4 (40945395-40945131)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	1-282, gnl\|bosTau2\|chr5 (33700029-33700328)
	1-282, gnl\|Hg17\|chr9 (33103199-33102916)
	1-282, gnl\|Mm7\|chr4 (40945395-40945131)