Non-Coding RNA Search

Ss1.1-Thy1-THY010103E04.5

Sequence:


               
               AAAATTAATTATATCTTAGTAATAATGGTTTTTGTTCATCGAATAGAATATCATCTTTTC
TAATAGGATTTATCACATACCATTCCTGAAATGTCTGCCTTAGAAGTACAGTTACAGGGG
AAGGTTTTATTTCATGATAAAGATCAGTTGAAAACATGAAGTTCAGTTTGTTTTAGATTG
GTTTTTCTTTCAGGAAAAACAGTTTTAAAGGTCCAAGCAAGCCATAAGATATAAATGAAT
AATGTTATGCAGTTTCATTATTGTGATCTACATTCTTGCTGTTTCTAAACAATATGTTGA
TCCTTTATTTCCCAAAGAGATCGAGACCTCTAATAATAAGCATATTTACAAAACCCATGT
CTTAAAACAAGGCTTATTTATCAGATATAACTGAATGTAGAAAGCTTTTTCAACTCTGTA
TGCAAATTAGTGAGGTTTTTGCATGTTTAATTAAGATTATACTTCAACTGATGTTTCTTT
AGCATGTATACTATAATCAGGTGATGAATTATTCTTTCAGTCTTTTGTAGAAACTGGAAA
TTGTCTTATGCTTTTGGTATTGCTTTGTAAAACATTTTGACTTCGGAGAGAAGTGTTCAT
CTTTACCATTTAGTATATTGATTTAAGTGTTGATCATTCCATTCAAGGAGAATCATAATT
ATAAATGGTAAATAGTGAGGGGGTTTTTTTTTTTAATAGAGTCTCACAGAATTCTCTACT
TTCTAAAGGTGCCTGTTTAATGCCTTTTGAAAAAGAACATCTGGTTATTCAAATGTAAAA
AAGTGAATCCATTTACTGTTAAATTGTGGTTAACAATAAACTTAACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATTAATTATATCTTAGTAATAATGGTTTTTGTTCATCGAATAGAATATCATCTTTTC
TAATAGGATTTATCACATACCATTCCTGAAATGTCTGCCTTAGAAGTACAGTTACAGGGG
AAGGTTTTATTTCATGATAAAGATCAGTTGAAAACATGAAGTTCAGTTTGTTTTAGATTG
GTTTTTCTTTCAGGAAAAACAGTTTTAAAGGTCCAAGCAAGCCATAAGATATAAATGAAT
AATGTTATGCAGTTTCATTATTGTGATCTACATTCTTGCTGTTTCTAAACAATATGTTGA
TCCTTTATTTCCCAAAGAGATCGAGACCTCTAATAATAAGCATATTTACAAAACCCATGT
CTTAAAACAAGGCTTATTTATCAGATATAACTGAATGTAGAAAGCTTTTTCAACTCTGTA
TGCAAATTAGTGAGGTTTTTGCATGTTTAATTAAGATTATACTTCAACTGATGTTTCTTT
AGCATGTATACTATAATCAGGTGATGAATTATTCTTTCAGTCTTTTGTAGAAACTGGAAA
TTGTCTTATGCTTTTGGTATTGCTTTGTAAAACATTTTGACTTCGGAGAGAAGTGTTCAT
CTTTACCATTTAGTATATTGATTTAAGTGTTGATCATTCCATTCAAGGAGAATCATAATT
ATAAATGGTAAATAGTGAGGGGGTTTTTTTTTTTAATAGAGTCTCACAGAATTCTCTACT
TTCTAAAGGTGCCTGTTTAATGCCTTTTGAAAAAGAACATCTGGTTATTCAAATGTAAAA
AAGTGAATCCATTTACTGTTAAATTGTGGTTAACAATAAACTTAACCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               437-680, gnl|bosTau2|chr14 (48250431-48250184)
               

               
               437-680, gnl|Hg17|chr5 (36139327-36139080)
               

               
               437-680, gnl|Mm7|chr15 (9255213-9255458)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               437-680, gnl|bosTau2|chr14 (48250431-48250184)
               

               
               437-680, gnl|Hg17|chr5 (36139327-36139080)
               

               
               437-680, gnl|Mm7|chr15 (9255213-9255458)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               col (0.195008)
               

               
               liv (0.146284)
               

               
               lin (0.145603)
               

               
               eep (0.122564)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               liv (0.146284)
               

               
               lin (0.145603)
               

               
               eep (0.122564)

	437-680, gnl\|bosTau2\|chr14 (48250431-48250184)
	437-680, gnl\|Hg17\|chr5 (36139327-36139080)
	437-680, gnl\|Mm7\|chr15 (9255213-9255458)