Ss1.1-Thy1-THY010106G09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACCCAGCAAACCTAACCCCGCCGCTCTGGGCAGCACCATGACTCGCGGCAGGGAGGTGC TGGACCTACCAGTGTGGAGCAGAACCTCAGGTCCGTCCCACGGTCCCCACTGCAGAGATG CAATGGCTCATCTTGATTCAGAGGTGAAGGAAGAGCGTCTGCGGGAAGACCTCAAGTTTT ACTTCATGAACCCTTGTGAGAAATTCCGAGCCCGACAACAGATTCCGTGGAAACTGGGTT TGCAGATTTTGAAGATAGTCATGGTCACCTCACAGCTTGTTCGTTTTGGTTTAAGTAACC AGCTGGTGGTTGCTTTCAAAGAAGAAAACATTGTTGCTTTTAAACATTTGTTTTTGAGAG GCTATTCCGGCACAGATGAAGATGACTATAGTTGCAGTGTATTTACTCAAGAGGACACCT ACGAGAGCATCTTTTTTGCTATTAATCAGTATCATCGTCTAGGGAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACCCAGCAAACCTAACCCCGCCGCTCTGGGCAGCACCATGACTCGCGGCAGGGAGGTGC TGGACCTACCAGTGTGGAGCAGAACCTCAGGTCCGTCCCACGGTCCCCACTGCAGAGATG CAATGGCTCATCTTGATTCAGAGGTGAAGGAAGAGCGTCTGCGGGAAGACCTCAAGTTTT ACTTCATGAACCCTTGTGAGAAATTCCGAGCCCGACAACAGATTCCGTGGAAACTGGGTT TGCAGATTTTGAAGATAGTCATGGTCACCTCACAGCTTGTTCGTTTTGGTTTAAGTAACC AGCTGGTGGTTGCTTTCAAAGAAGAAAACATTGTTGCTTTTAAACATTTGTTTTTGAGAG GCTATTCCGGCACAGATGAAGATGACTATAGTTGCAGTGTATTTACTCAAGAGGACACCT ACGAGAGCATCTTTTTTGCTATTAATCAGTATCATCGTCTAGGGAACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 111-275, gnl|bosTau2|chr3 (44587653-44587817) | |
| 111-275, gnl|canFam2|chr6 (66031923-66031760) | |
| 111-275, gnl|danRer3|chr23 (26793851-26794016) | |
| 111-275, gnl|dasNov1|scaffold_3237 (81019-81179) | |
| 111-275, gnl|echTel1|scaffold_310061 (1272-1141) | |
| 111-275, gnl|fr1|chrUn (100429877-100430008) | |
| 111-275, gnl|galGal2|chr8 (16724797-16724637) | |
| 111-275, gnl|hg17|chr1 (85143228-85143386) | |
| 111-275, gnl|Hg17|chr1 (85143421-85143253) | |
| 111-275, gnl|loxAfr1|scaffold_68149 (8570-8413) | |
| 111-275, gnl|mm7|chr3 (146062259-146062122) | |
| 111-275, gnl|Mm7|chr3 (146062086-146062253) | |
| 111-275, gnl|monDom2|scaffold_16 (2166601-2166450) | |
| 111-275, gnl|oryCun1|scaffold_176366 (79564-79405) | |
| 111-275, gnl|panTro1|chr1 (83817053-83817211) | |
| 111-275, gnl|rheMac2|chr1 (87763486-87763644) | |
| 111-275, gnl|rn3|chr2 (244326857-244326720) | |
| 111-275, gnl|tetNig1|chr1 (11965629-11965495) | |
| 111-275, gnl|xenTro1|scaffold_513 (142283-142130) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 111-275, gnl|bosTau2|chr3 (44587653-44587817) | |
| 111-275, gnl|canFam2|chr6 (66031923-66031760) | |
| 111-275, gnl|danRer3|chr23 (26793851-26794016) | |
| 111-275, gnl|dasNov1|scaffold_3237 (81019-81179) | |
| 111-275, gnl|echTel1|scaffold_310061 (1272-1141) | |
| 111-275, gnl|fr1|chrUn (100429877-100430008) | |
| 111-275, gnl|galGal2|chr8 (16724797-16724637) | |
| 111-275, gnl|hg17|chr1 (85143228-85143386) | |
| 111-275, gnl|Hg17|chr1 (85143421-85143253) | |
| 111-275, gnl|loxAfr1|scaffold_68149 (8570-8413) | |
| 111-275, gnl|mm7|chr3 (146062259-146062122) | |
| 111-275, gnl|Mm7|chr3 (146062086-146062253) | |
| 111-275, gnl|monDom2|scaffold_16 (2166601-2166450) | |
| 111-275, gnl|oryCun1|scaffold_176366 (79564-79405) | |
| 111-275, gnl|panTro1|chr1 (83817053-83817211) | |
| 111-275, gnl|rheMac2|chr1 (87763486-87763644) | |
| 111-275, gnl|rn3|chr2 (244326857-244326720) | |
| 111-275, gnl|tetNig1|chr1 (11965629-11965495) | |
| 111-275, gnl|xenTro1|scaffold_513 (142283-142130) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| nje (0.16592) |