Non-Coding RNA Search

Ss1.1-Thy1-THY010108E02.5

Sequence:


               
               GAACTCGAACAGACAGCAGAGACTAAATCTTTAGGGGAAAACTTTGCAGAATTCAGATCT
GCGGGAACTGATGATGGTTTCACCGATTTTAAAACTGCCGATAGTATCTCACCACTAGAG
CCACCCACAAAAGACAAAACTTTTCCAGCAGCCTTCCCCTCAGGAACTATCCAACAGAAA
CCACAGACCCAAGTGAAAAATCCTCTGAACTTAGCAGACCTAGACATGTTCTCCTCAGTT
ACCTCCAGCAGCGAGAAACCATTGTCCTTTTCAACTGCATTTAGTGCATCAAAATCCGTT
TCCACACGACCCCAGCCAGCAGGTTCTGCTGCAACTATGACAGCATTGGCATCAACTAAA
ACTTCTAGTTTGGCTGATGATTTTGGAGACTTCAACCTTTTTGGAGAATATTCTAGTCCA
GCATCTATTGGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTCAGTAATAGTTCTCTT
TCCTCTGAGCAGAAGTCAGATGACAAATATGAGGCCCTTAAAGAGGAATCTAGTCCTGTC
CCTCTAACCAGCAGTGCGAGCAGCACCGGGAAGAGTGGACAGAACTCAGCTGCCATGTCC
ACCAAATACGATGTCTTCAAACAGCTCTCTCTGGAAGGACCGGGACTAGGTGTTGAAGAG
CTGAAAGAGAACACTCCTTCAGGAAAGAGCGATGATGACTTTGCTGACTTCCACTCCAGC
AAATTGTCCTCCATGAACTCGGACAAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC
ACCAAAGAAGATTCAGCTTCGGTGAAGTCCCTGGATCTCCCTTCCATCGGGGGCAGCAGC
GTCGGCAAGGAGGACTCTGAAGATGCGCTCTCTGTTCAGTTTGACATGAAACTGGCTGAT
GTGGGAGGCGATCTTAAGCATGTCATGTCTGATAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTCGAACAGACAGCAGAGACTAAATCTTTAGGGGAAAACTTTGCAGAATTCAGATCT
GCGGGAACTGATGATGGTTTCACCGATTTTAAAACTGCCGATAGTATCTCACCACTAGAG
CCACCCACAAAAGACAAAACTTTTCCAGCAGCCTTCCCCTCAGGAACTATCCAACAGAAA
CCACAGACCCAAGTGAAAAATCCTCTGAACTTAGCAGACCTAGACATGTTCTCCTCAGTT
ACCTCCAGCAGCGAGAAACCATTGTCCTTTTCAACTGCATTTAGTGCATCAAAATCCGTT
TCCACACGACCCCAGCCAGCAGGTTCTGCTGCAACTATGACAGCATTGGCATCAACTAAA
ACTTCTAGTTTGGCTGATGATTTTGGAGACTTCAACCTTTTTGGAGAATATTCTAGTCCA
GCATCTATTGGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTCAGTAATAGTTCTCTT
TCCTCTGAGCAGAAGTCAGATGACAAATATGAGGCCCTTAAAGAGGAATCTAGTCCTGTC
CCTCTAACCAGCAGTGCGAGCAGCACCGGGAAGAGTGGACAGAACTCAGCTGCCATGTCC
ACCAAATACGATGTCTTCAAACAGCTCTCTCTGGAAGGACCGGGACTAGGTGTTGAAGAG
CTGAAAGAGAACACTCCTTCAGGAAAGAGCGATGATGACTTTGCTGACTTCCACTCCAGC
AAATTGTCCTCCATGAACTCGGACAAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC
ACCAAAGAAGATTCAGCTTCGGTGAAGTCCCTGGATCTCCCTTCCATCGGGGGCAGCAGC
GTCGGCAAGGAGGACTCTGAAGATGCGCTCTCTGTTCAGTTTGACATGAAACTGGCTGAT
GTGGGAGGCGATCTTAAGCATGTCATGTCTGATAGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61834353|ref|XP_582236.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61834353|ref|XP_582236.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               28-936, gnl|bosTau2|chr19 (7011014-7011923)
               

               
               28-936, gnl|Hg17|chr17 (32988282-32987376)
               

               
               28-936, gnl|Mm7|chr11 (84078518-84079412)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-936, gnl|bosTau2|chr19 (7011014-7011923)
               

               
               28-936, gnl|Hg17|chr17 (32988282-32987376)
               

               
               28-936, gnl|Mm7|chr11 (84078518-84079412)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	28-936, gnl\|bosTau2\|chr19 (7011014-7011923)
	28-936, gnl\|Hg17\|chr17 (32988282-32987376)
	28-936, gnl\|Mm7\|chr11 (84078518-84079412)