Non-Coding RNA Search

Ss1.1-Thy1-THY010125E10.5

Sequence:


               
               ACCCCACATTGGCGGGCACCGAGCGGGGGCCCCCCACCAGCTGCCGGACGCCTGGATGCC
GTAGCAGAGCAGGGTTCCAGGTCTGTGGAAGACATAATCTTGTGCCTGTCTGCACACCCA
CCCCAGTCTCTGGCTTTGCTAGTCTCAGGGTCTAAGACACTGACCTTCACTGCTCAGCTA
AGGGCTCCAGGGACTCTGCTTTCTCTAGACCTGTCCAGCTAAGTAAACCCAGGGTGGTGC
TACGCCTGAGGCGAGTGAGGCGTGGGCAGTTAAGGCACCAGAGCAAGAGCCCCCTGGGGC
CTCAGGCAGAAGACTGAAACTGGAACCATCAGGGAACATGAGTGAATTTTGGCACAAACT
GGGCTGCTGCGTGGTGGAGAAACCCCAGCCGAAGAAGAAGAGGAGACGGATTGACCGGAC
CATGATTGGGGAACCAATGAATTTTGTCCACCTGACTCACATTGGCTCTGGGGAGATGGG
GGCCGGAGATGGACTTGCCATGACAGGTGCAGTTCAGGAGCAGATGAGATCCAAGGGAAA
CCGAGACAGGCCGTGGAGCAATTCTAGGGGCTTGTAGCTCCAATAGGAATGGTTCTGCTG
TGTGTCCAGCCTTCACTGTGTCCAGCCCAGAAGAGATGCTGTCCCCACCAGATGCCCTCC
TAGAATCAGTGACCCCAGGGCCCTTCTTTTCCCTGTCTAATAGTGCCTCAGAAGACTTGG
GGGCTGGACTCCCTCTACTCCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCCACATTGGCGGGCACCGAGCGGGGGCCCCCCACCAGCTGCCGGACGCCTGGATGCC
GTAGCAGAGCAGGGTTCCAGGTCTGTGGAAGACATAATCTTGTGCCTGTCTGCACACCCA
CCCCAGTCTCTGGCTTTGCTAGTCTCAGGGTCTAAGACACTGACCTTCACTGCTCAGCTA
AGGGCTCCAGGGACTCTGCTTTCTCTAGACCTGTCCAGCTAAGTAAACCCAGGGTGGTGC
TACGCCTGAGGCGAGTGAGGCGTGGGCAGTTAAGGCACCAGAGCAAGAGCCCCCTGGGGC
CTCAGGCAGAAGACTGAAACTGGAACCATCAGGGAACATGAGTGAATTTTGGCACAAACT
GGGCTGCTGCGTGGTGGAGAAACCCCAGCCGAAGAAGAAGAGGAGACGGATTGACCGGAC
CATGATTGGGGAACCAATGAATTTTGTCCACCTGACTCACATTGGCTCTGGGGAGATGGG
GGCCGGAGATGGACTTGCCATGACAGGTGCAGTTCAGGAGCAGATGAGATCCAAGGGAAA
CCGAGACAGGCCGTGGAGCAATTCTAGGGGCTTGTAGCTCCAATAGGAATGGTTCTGCTG
TGTGTCCAGCCTTCACTGTGTCCAGCCCAGAAGAGATGCTGTCCCCACCAGATGCCCTCC
TAGAATCAGTGACCCCAGGGCCCTTCTTTTCCCTGTCTAATAGTGCCTCAGAAGACTTGG
GGGCTGGACTCCCTCTACTCCCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55960655|emb|CAI13349.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55960655|emb|CAI13349.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               34-744, gnl|bosTau2|chr2 (80012406-80011704)
               

               
               34-744, gnl|Hg17|chr1 (147841545-147838720)
               

               
               34-744, gnl|Mm7|chr9 (79011415-79010737)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-744, gnl|bosTau2|chr2 (80012406-80011704)
               

               
               34-744, gnl|Hg17|chr1 (147841545-147838720)
               

               
               34-744, gnl|Mm7|chr9 (79011415-79010737)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ill (0.175593)
               

               
               pty (0.142714)
               

               
               eru (0.120048)
               

               
               clu (0.119646)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               pty (0.142714)
               

               
               eru (0.120048)
               

               
               clu (0.119646)

	34-744, gnl\|bosTau2\|chr2 (80012406-80011704)
	34-744, gnl\|Hg17\|chr1 (147841545-147838720)
	34-744, gnl\|Mm7\|chr9 (79011415-79010737)