Ss1.1-Thy1-THY010202C12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCGGCCGCGGCTTTCCCCCCTTCGGCCGCGGCGAGGAGGAGCCGGAGCGGGAGTGACAC CCGGCCGGACCCTGCGCGACCTGCGGCGGCTCCGGGTGACTCGGGCCAGTGTCGAGGGCC CCAGGCCGCAGGCAGGAGCAGCTGGGCCAATTCCCTGGCCGGGAGCGGAAGGGGATGGCG TCGGGCCTGGGCTCCCCGTCCCCCTGCTCAGCGGGCAGTGAGGAGGAGGATATGGATGCA CTTTTGAACAACAGCCTGCCCCCACCCCACCCAGAAAACGAAGAGGACCCGGAAGAGGAT TTGTCCGAAGCAGAGACTCCAAAGCTCAAGAAGAAGAAAAAGCCTAAGAAACCTCGGGAC CCTAAAATTCCTAAGAGCAAGCGCCAAAAAAAGGAGCTGGGGGACAGCTCTGGGGAGGGG CCGGAGTTTGTGGAGGAGGAAGAAGAGGTGGCTCTGCGCTCAGACAGTGAGGGCAGCGAC TATACCCCCGGCAAGAAAAAGAAGAAGAAGCTTGGACCTAAGAAAGAAAAGAAAAGCAAA TCCAAGCGGAAAGAAGAGGAGGAGGAGGACGACGATGACGATGATTCAAAGGAGCCTAAA TCATCTGCTCAGCTCTTGGAAGACTGGGGCATGGAAGACATTGACCACGTGTTCTCAGAG GAAGATTATCGCACCCTCACCAACTACAAGGCCTTCAGCCAGTTTGTCCGACCCCTCATT GCTGCCAAAAACCCCAAGATCGCTGTCTCCAAGATGATGATGGTTTTGGGTGCGAAGTGG CGGGAGTTCAGCACCAACAACCCCTTCAAAGGCAGTTCTGGGGCTTCTGTGGCAGCGGCA GCAGCAGCAGCAGTGGCCGTGGTGGAGAGCATGGTGACGGCCACAGAGGTTGCACCACCT CCACCCCCCGTGGAGGTGCCTATCCGCAAGGCCAAGACCAAGGAGGGCAAAGGTCCCAAT GCTCGGAGGAAGCCCAAGGGCAGTCCTCGTGTCCCTGATGCCAAGAAGCCTAAACCCAAG AAAGTGGCTCCCCTGAAAATCAAGCTGGGAGGTTTTGGTTCTAAGCGTAAGAGATCCTCG AGTGAGGATGATGACTTAGATGTGGAATCTGACTTCGACGATGCCAGTATCAATAGCTAT TCTGTTTCGGATGGTTCTACCAGCCGTAGTAGCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCGGCCGCGGCTTTCCCCCCTTCGGCCGCGGCGAGGAGGAGCCGGAGCGGGAGTGACAC CCGGCCGGACCCTGCGCGACCTGCGGCGGCTCCGGGTGACTCGGGCCAGTGTCGAGGGCC CCAGGCCGCAGGCAGGAGCAGCTGGGCCAATTCCCTGGCCGGGAGCGGAAGGGGATGGCG TCGGGCCTGGGCTCCCCGTCCCCCTGCTCAGCGGGCAGTGAGGAGGAGGATATGGATGCA CTTTTGAACAACAGCCTGCCCCCACCCCACCCAGAAAACGAAGAGGACCCGGAAGAGGAT TTGTCCGAAGCAGAGACTCCAAAGCTCAAGAAGAAGAAAAAGCCTAAGAAACCTCGGGAC CCTAAAATTCCTAAGAGCAAGCGCCAAAAAAAGGAGCTGGGGGACAGCTCTGGGGAGGGG CCGGAGTTTGTGGAGGAGGAAGAAGAGGTGGCTCTGCGCTCAGACAGTGAGGGCAGCGAC TATACCCCCGGCAAGAAAAAGAAGAAGAAGCTTGGACCTAAGAAAGAAAAGAAAAGCAAA TCCAAGCGGAAAGAAGAGGAGGAGGAGGACGACGATGACGATGATTCAAAGGAGCCTAAA TCATCTGCTCAGCTCTTGGAAGACTGGGGCATGGAAGACATTGACCACGTGTTCTCAGAG GAAGATTATCGCACCCTCACCAACTACAAGGCCTTCAGCCAGTTTGTCCGACCCCTCATT GCTGCCAAAAACCCCAAGATCGCTGTCTCCAAGATGATGATGGTTTTGGGTGCGAAGTGG CGGGAGTTCAGCACCAACAACCCCTTCAAAGGCAGTTCTGGGGCTTCTGTGGCAGCGGCA GCAGCAGCAGCAGTGGCCGTGGTGGAGAGCATGGTGACGGCCACAGAGGTTGCACCACCT CCACCCCCCGTGGAGGTGCCTATCCGCAAGGCCAAGACCAAGGAGGGCAAAGGTCCCAAT GCTCGGAGGAAGCCCAAGGGCAGTCCTCGTGTCCCTGATGCCAAGAAGCCTAAACCCAAG AAAGTGGCTCCCCTGAAAATCAAGCTGGGAGGTTTTGGTTCTAAGCGTAAGAGATCCTCG AGTGAGGATGATGACTTAGATGTGGAATCTGACTTCGACGATGCCAGTATCAATAGCTAT TCTGTTTCGGATGGTTCTACCAGCCGTAGTAGCCGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 273-399, gnl|bosTau2|chr5 (60584222-60584348) | |
| 273-399, gnl|Hg17|chr12 (6581926-6581800) | |
| 273-399, gnl|Mm7|chr6 (125126092-125126218) | |
| 590-704, gnl|bosTau2|chr16 (34982076-34982190) | |
| 590-704, gnl|canFam2|chr5 (63065938-63066032) | |
| 590-704, gnl|danRer3|chr11 (14526518-14526428) | |
| 590-704, gnl|dasNov1|scaffold_151271 (4263-4169) | |
| 590-704, gnl|echTel1|scaffold_319550 (3516-3426) | |
| 590-704, gnl|fr1|chrUn (283181464-283181551) | |
| 590-704, gnl|galGal2|chr21 (557908-557821) | |
| 590-704, gnl|hg17|chr1 (6149917-6150011) | |
| 590-704, gnl|Hg17|chr1 (6150045-6149931) | |
| 590-704, gnl|loxAfr1|scaffold_25340 (4623-4529) | |
| 590-704, gnl|mm7|chr4 (151345751-151345657) | |
| 590-704, gnl|Mm7|chr4 (151345621-151345735) | |
| 590-704, gnl|monDom2|scaffold_78 (2388390-2388297) | |
| 590-704, gnl|oryCun1|scaffold_128125 (6265-6171) | |
| 590-704, gnl|panTro1|chr1 (6077430-6077524) | |
| 590-704, gnl|rheMac2|chr1 (9158529-9158623) | |
| 590-704, gnl|rn3|chr5 (169598804-169598710) | |
| 590-704, gnl|tetNig1|chr20 (676552-676640) | |
| 590-704, gnl|xenTro1|scaffold_46 (571573-571663) | |
| 710-954, gnl|bosTau2|chr16 (34982891-34983132) | |
| 710-954, gnl|Hg17|chr1 (6149225-6148984) | |
| 710-954, gnl|Mm7|chr4 (151346161-151346402) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 273-399, gnl|bosTau2|chr5 (60584222-60584348) | |
| 273-399, gnl|Hg17|chr12 (6581926-6581800) | |
| 273-399, gnl|Mm7|chr6 (125126092-125126218) | |
| 590-704, gnl|bosTau2|chr16 (34982076-34982190) | |
| 590-704, gnl|canFam2|chr5 (63065938-63066032) | |
| 590-704, gnl|danRer3|chr11 (14526518-14526428) | |
| 590-704, gnl|dasNov1|scaffold_151271 (4263-4169) | |
| 590-704, gnl|echTel1|scaffold_319550 (3516-3426) | |
| 590-704, gnl|fr1|chrUn (283181464-283181551) | |
| 590-704, gnl|galGal2|chr21 (557908-557821) | |
| 590-704, gnl|hg17|chr1 (6149917-6150011) | |
| 590-704, gnl|Hg17|chr1 (6150045-6149931) | |
| 590-704, gnl|loxAfr1|scaffold_25340 (4623-4529) | |
| 590-704, gnl|mm7|chr4 (151345751-151345657) | |
| 590-704, gnl|Mm7|chr4 (151345621-151345735) | |
| 590-704, gnl|monDom2|scaffold_78 (2388390-2388297) | |
| 590-704, gnl|oryCun1|scaffold_128125 (6265-6171) | |
| 590-704, gnl|panTro1|chr1 (6077430-6077524) | |
| 590-704, gnl|rheMac2|chr1 (9158529-9158623) | |
| 590-704, gnl|rn3|chr5 (169598804-169598710) | |
| 590-704, gnl|tetNig1|chr20 (676552-676640) | |
| 590-704, gnl|xenTro1|scaffold_46 (571573-571663) | |
| 710-954, gnl|bosTau2|chr16 (34982891-34983132) | |
| 710-954, gnl|Hg17|chr1 (6149225-6148984) | |
| 710-954, gnl|Mm7|chr4 (151346161-151346402) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cst (0.140036) |