Ss1.1-Thy1-THY010202D02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACTTTGCCTGGCGCTGCGGCCGGGGGGAGCCTGCTGGCGGTGGCTGCTGGCGGTGTCCTG CGTTTCACTTCGAGGATTGGGAGCTCCGGGGTCGTGTGCCAACATGTATGACGCGGACGA GGATATGCAATATGATGAGGATGATGATGAAATCACCCCAGATTTGTGGCAAGAGGCATG CTGGATTGTTATTAGTTCCTATTTTGATGAGAAAGGCTTGGTCAGACAACAGCTGGATTC CTTTGATGAGTTTATTCAGATGTCTGTTCAAAGGATTGTGGAGGATGCTCCACCCATTGA CCTACAGGCGGAAGCTCAGCACGCTAGCGGAGAGGTGGAAGAACCGCCAAGGTATTTGCT GAAGTTTGAACAGATTTACCTCTCCAAGCCTACCCATTGGGAAAGAGATGGAGCTCCTTC CCCAATGATGCCAAATGAGGCCAGGTTACGAAATCTCACGTACTCTGCTCCGCTTTATGT TGATATAACAAAAACAGTCATTAAAGAAGGTGAAGAACAACTCCAGACGCAACATCAGAA AACTTTTATAGGAAAAATTCCAATTATGCTGCGTTCAACTTACTGCCTATTGAATGGCTT AACAGACCGTGATCTTTGTGAGTTAAATGAATGCCCCTTGGATCCTGGTGGCTACTTCAT TATTAATGGATCAGAAAAGGTTCTGATTGCTCAAGAGAAAATGGCAACAAACACAGTCTA TGTGTTTGCCAAAAAGGACTCTAAATATGCCTACACTGGAGAGTGTAGATCATGTCTGGA GAATTCCTCTCGACCCACCAGCACTATCTGGGTTAGCATGCTGGCCAGAGGAGGACAGGG GTGCAAAAAAGAGTGCTATTGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACTTTGCCTGGCGCTGCGGCCGGGGGGAGCCTGCTGGCGGTGGCTGCTGGCGGTGTCCTG CGTTTCACTTCGAGGATTGGGAGCTCCGGGGTCGTGTGCCAACATGTATGACGCGGACGA GGATATGCAATATGATGAGGATGATGATGAAATCACCCCAGATTTGTGGCAAGAGGCATG CTGGATTGTTATTAGTTCCTATTTTGATGAGAAAGGCTTGGTCAGACAACAGCTGGATTC CTTTGATGAGTTTATTCAGATGTCTGTTCAAAGGATTGTGGAGGATGCTCCACCCATTGA CCTACAGGCGGAAGCTCAGCACGCTAGCGGAGAGGTGGAAGAACCGCCAAGGTATTTGCT GAAGTTTGAACAGATTTACCTCTCCAAGCCTACCCATTGGGAAAGAGATGGAGCTCCTTC CCCAATGATGCCAAATGAGGCCAGGTTACGAAATCTCACGTACTCTGCTCCGCTTTATGT TGATATAACAAAAACAGTCATTAAAGAAGGTGAAGAACAACTCCAGACGCAACATCAGAA AACTTTTATAGGAAAAATTCCAATTATGCTGCGTTCAACTTACTGCCTATTGAATGGCTT AACAGACCGTGATCTTTGTGAGTTAAATGAATGCCCCTTGGATCCTGGTGGCTACTTCAT TATTAATGGATCAGAAAAGGTTCTGATTGCTCAAGAGAAAATGGCAACAAACACAGTCTA TGTGTTTGCCAAAAAGGACTCTAAATATGCCTACACTGGAGAGTGTAGATCATGTCTGGA GAATTCCTCTCGACCCACCAGCACTATCTGGGTTAGCATGCTGGCCAGAGGAGGACAGGG GTGCAAAAAAGAGTGCTATTGGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 194-360, gnl|bosTau2|chr6 (38078485-38078319) | |
| 194-360, gnl|canFam2|chr13 (52032262-52032426) | |
| 194-360, gnl|danRer3|chrNA (28190547-28190711) | |
| 194-360, gnl|echTel1|scaffold_168528 (3248-3412) | |
| 194-360, gnl|galGal2|chr4 (49760231-49760067) | |
| 194-360, gnl|hg17|chr4 (57697834-57697998) | |
| 194-360, gnl|Hg17|chr4 (57697840-57698003) | |
| 194-360, gnl|loxAfr1|scaffold_2805 (13331-13167) | |
| 194-360, gnl|mm7|chr5 (77247171-77247335) | |
| 194-360, gnl|Mm7|chr5 (77247177-77247343) | |
| 194-360, gnl|monDom2|scaffold_26 (20894679-20894843) | |
| 194-360, gnl|oryCun1|scaffold_201531 (7595-7759) | |
| 194-360, gnl|panTro1|chr3 (88926508-88926344) | |
| 194-360, gnl|rheMac2|chr5 (72387523-72387359) | |
| 194-360, gnl|rn3|chr14 (33102832-33102668) | |
| 194-360, gnl|tetNig1|chrUn_random (47580698-47580861) | |
| 194-360, gnl|xenTro1|scaffold_157 (131054-130897) | |
| 460-681, gnl|bosTau2|chr6 (38073397-38073176) | |
| 460-681, gnl|canFam2|chr13 (52034737-52034992) | |
| 460-681, gnl|danRer3|chrNA (28192404-28192683) | |
| 460-681, gnl|echTel1|scaffold_166257 (7437-7693) | |
| 460-681, gnl|galGal2|chr4 (49757281-49757017) | |
| 460-681, gnl|hg17|chr4 (57701722-57701975) | |
| 460-681, gnl|Hg17|chr4 (57701741-57701962) | |
| 460-681, gnl|mm7|chr5 (77251518-77251771) | |
| 460-681, gnl|Mm7|chr5 (77251540-77251761) | |
| 460-681, gnl|monDom2|scaffold_26 (20897442-20897696) | |
| 460-681, gnl|oryCun1|scaffold_201531 (10154-10410) | |
| 460-681, gnl|panTro1|chr3 (88922628-88922375) | |
| 460-681, gnl|rheMac2|chr5 (72383625-72383372) | |
| 460-681, gnl|rn3|chr14 (33099160-33098907) | |
| 460-681, gnl|tetNig1|chrUn_random (47581619-47581870) | |
| 460-681, gnl|xenTro1|scaffold_157 (124328-124074) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 194-360, gnl|bosTau2|chr6 (38078485-38078319) | |
| 194-360, gnl|canFam2|chr13 (52032262-52032426) | |
| 194-360, gnl|danRer3|chrNA (28190547-28190711) | |
| 194-360, gnl|echTel1|scaffold_168528 (3248-3412) | |
| 194-360, gnl|galGal2|chr4 (49760231-49760067) | |
| 194-360, gnl|hg17|chr4 (57697834-57697998) | |
| 194-360, gnl|Hg17|chr4 (57697840-57698003) | |
| 194-360, gnl|loxAfr1|scaffold_2805 (13331-13167) | |
| 194-360, gnl|mm7|chr5 (77247171-77247335) | |
| 194-360, gnl|Mm7|chr5 (77247177-77247343) | |
| 194-360, gnl|monDom2|scaffold_26 (20894679-20894843) | |
| 194-360, gnl|oryCun1|scaffold_201531 (7595-7759) | |
| 194-360, gnl|panTro1|chr3 (88926508-88926344) | |
| 194-360, gnl|rheMac2|chr5 (72387523-72387359) | |
| 194-360, gnl|rn3|chr14 (33102832-33102668) | |
| 194-360, gnl|tetNig1|chrUn_random (47580698-47580861) | |
| 194-360, gnl|xenTro1|scaffold_157 (131054-130897) | |
| 460-681, gnl|bosTau2|chr6 (38073397-38073176) | |
| 460-681, gnl|canFam2|chr13 (52034737-52034992) | |
| 460-681, gnl|danRer3|chrNA (28192404-28192683) | |
| 460-681, gnl|echTel1|scaffold_166257 (7437-7693) | |
| 460-681, gnl|galGal2|chr4 (49757281-49757017) | |
| 460-681, gnl|hg17|chr4 (57701722-57701975) | |
| 460-681, gnl|Hg17|chr4 (57701741-57701962) | |
| 460-681, gnl|mm7|chr5 (77251518-77251771) | |
| 460-681, gnl|Mm7|chr5 (77251540-77251761) | |
| 460-681, gnl|monDom2|scaffold_26 (20897442-20897696) | |
| 460-681, gnl|oryCun1|scaffold_201531 (10154-10410) | |
| 460-681, gnl|panTro1|chr3 (88922628-88922375) | |
| 460-681, gnl|rheMac2|chr5 (72383625-72383372) | |
| 460-681, gnl|rn3|chr14 (33099160-33098907) | |
| 460-681, gnl|tetNig1|chrUn_random (47581619-47581870) | |
| 460-681, gnl|xenTro1|scaffold_157 (124328-124074) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) |