Ss1.1-Thy1-THY010202G11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGAGATGTGTCAGCTCCAGCCCCACACAGCTTAACCTCAGCCTCCCTGCGTGTTTCAGT GCTTCAGGCTCTGCTCCAAGAACCTGGGAGGAGCCTCCTCAACTCTGTCTATGATGTTGG GTCAGCGTGTTCGCCAATTTGGTGAGAAACTGGTCCGAAGGCGGCCACTGGAGCCGAGGA ACGAGTCTGAGATTCCCACACCTCATCTCAACAGCTTCGACCTAGTGGTCTTTGGTGTGA ACAGAACCCTGAGGGCTGGTGTGTACATCCTAGCTGGTGCCGTGGCTGTGTATGTAACTG GGCCTGCGATCATTATCTCCTTCTTGGTGGCTGGCTTATTTGCCCTGTTGTCTGGATTCT ACTTTGCTGAGTTTGGGGCCCGGGTACCCTGCTGTGGTTCTGTGTATCTCTACAGCTATG TAACAATGGGACAACTGCATGCCTTCATCACTGGCTGGAACATCATACTGCATTTTGTTC TTGCCACCGCCTACTTGACCAGGGCCTGGAGCTACACCTTTGACAGCCTGATTGGGAACC ACATCTCGCAGGTGTTAGAGGGAACGTTCTCTGAGCATATGCCCTCGTTCCTGGCCCCAT ACCCAGACTTTGTTGCGCTGGCCCTGGTGCTGCTGATGGCTGGGCTACTGATTCTGGGCG TTCATGTGACAGCTCGTGTTACCAAAGTGTCCACAGGTATCAATGCTTTGGTTCTCAGCT TCATCATCATCTCTGGCTTCATTAAGGGAGACCTGCACAACTGGCAGCTCACAGAACAGG ACTACAAACTGGCCGCATCTGGATCCTCTGACAGCTATAGCCTGGGCCCTCTGGGTTCTG GAGGGTTTGTGCCCTTTGGCTTTGAAGGGATTCTCCGAGGAGCAGCTGTGCCTTTCTACT CATTCTTTGGTCTCAATGCCATTGTCACTACAGGGAAAGAAACCCCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGAGATGTGTCAGCTCCAGCCCCACACAGCTTAACCTCAGCCTCCCTGCGTGTTTCAGT GCTTCAGGCTCTGCTCCAAGAACCTGGGAGGAGCCTCCTCAACTCTGTCTATGATGTTGG GTCAGCGTGTTCGCCAATTTGGTGAGAAACTGGTCCGAAGGCGGCCACTGGAGCCGAGGA ACGAGTCTGAGATTCCCACACCTCATCTCAACAGCTTCGACCTAGTGGTCTTTGGTGTGA ACAGAACCCTGAGGGCTGGTGTGTACATCCTAGCTGGTGCCGTGGCTGTGTATGTAACTG GGCCTGCGATCATTATCTCCTTCTTGGTGGCTGGCTTATTTGCCCTGTTGTCTGGATTCT ACTTTGCTGAGTTTGGGGCCCGGGTACCCTGCTGTGGTTCTGTGTATCTCTACAGCTATG TAACAATGGGACAACTGCATGCCTTCATCACTGGCTGGAACATCATACTGCATTTTGTTC TTGCCACCGCCTACTTGACCAGGGCCTGGAGCTACACCTTTGACAGCCTGATTGGGAACC ACATCTCGCAGGTGTTAGAGGGAACGTTCTCTGAGCATATGCCCTCGTTCCTGGCCCCAT ACCCAGACTTTGTTGCGCTGGCCCTGGTGCTGCTGATGGCTGGGCTACTGATTCTGGGCG TTCATGTGACAGCTCGTGTTACCAAAGTGTCCACAGGTATCAATGCTTTGGTTCTCAGCT TCATCATCATCTCTGGCTTCATTAAGGGAGACCTGCACAACTGGCAGCTCACAGAACAGG ACTACAAACTGGCCGCATCTGGATCCTCTGACAGCTATAGCCTGGGCCCTCTGGGTTCTG GAGGGTTTGTGCCCTTTGGCTTTGAAGGGATTCTCCGAGGAGCAGCTGTGCCTTTCTACT CATTCTTTGGTCTCAATGCCATTGTCACTACAGGGAAAGAAACCCCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 90-483, gnl|bosTau2|chr18 (52897985-52897594) | |
| 90-483, gnl|Hg17|chrX (69932890-69932499) | |
| 90-483, gnl|Mm7|chrUn_random (1715138-1715536) | |
| 207-470, gnl|bosTau2|chr12 (15590946-15591209) | |
| 207-470, gnl|canFam2|chr25 (13326203-13325881) | |
| 207-470, gnl|danRer3|chr15 (20401051-20401371) | |
| 207-470, gnl|dasNov1|scaffold_79661 (175-497) | |
| 207-470, gnl|echTel1|scaffold_222066 (11124-11450) | |
| 207-470, gnl|fr1|chrUn (204860664-204861058) | |
| 207-470, gnl|galGal2|chr1 (167474322-167474000) | |
| 207-470, gnl|hg17|chr13 (29007950-29008272) | |
| 207-470, gnl|Hg17|chr13 (29008232-29007969) | |
| 207-470, gnl|loxAfr1|scaffold_66584 (16457-16135) | |
| 207-470, gnl|mm7|chr5 (147246769-147247091) | |
| 207-470, gnl|Mm7|chr5 (147247051-147246788) | |
| 207-470, gnl|monDom2|scaffold_15 (38929275-38929597) | |
| 207-470, gnl|oryCun1|scaffold_205624 (163226-163548) | |
| 207-470, gnl|panTro1|chr14 (28204862-28205184) | |
| 207-470, gnl|rheMac2|chr17 (9075105-9075427) | |
| 207-470, gnl|rn3|chr12 (7260845-7260523) | |
| 207-470, gnl|tetNig1|chr7 (3270898-3271307) | |
| 207-470, gnl|xenTro1|scaffold_978 (218368-218046) | |
| 485-635, gnl|bosTau2|chr18 (52897025-52896875) | |
| 485-635, gnl|Hg17|chrX (69931872-69931722) | |
| 485-635, gnl|Mm7|chrUn_random (1717070-1717220) | |
| 642-851, gnl|bosTau2|chr3 (68686783-68686996) | |
| 642-851, gnl|Hg17|chr19 (58803514-58802313) | |
| 642-851, gnl|Mm7|chrUn_random (1718020-1718206) | |
| 646-825, gnl|bosTau2|chr18 (52916860-52916681) | |
| 646-825, gnl|Hg17|chrX (69931501-69931322) | |
| 646-825, gnl|Mm7|chrUn_random (1718024-1718203) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 90-483, gnl|bosTau2|chr18 (52897985-52897594) | |
| 90-483, gnl|Hg17|chrX (69932890-69932499) | |
| 90-483, gnl|Mm7|chrUn_random (1715138-1715536) | |
| 207-470, gnl|bosTau2|chr12 (15590946-15591209) | |
| 207-470, gnl|canFam2|chr25 (13326203-13325881) | |
| 207-470, gnl|danRer3|chr15 (20401051-20401371) | |
| 207-470, gnl|dasNov1|scaffold_79661 (175-497) | |
| 207-470, gnl|echTel1|scaffold_222066 (11124-11450) | |
| 207-470, gnl|fr1|chrUn (204860664-204861058) | |
| 207-470, gnl|galGal2|chr1 (167474322-167474000) | |
| 207-470, gnl|hg17|chr13 (29007950-29008272) | |
| 207-470, gnl|Hg17|chr13 (29008232-29007969) | |
| 207-470, gnl|loxAfr1|scaffold_66584 (16457-16135) | |
| 207-470, gnl|mm7|chr5 (147246769-147247091) | |
| 207-470, gnl|Mm7|chr5 (147247051-147246788) | |
| 207-470, gnl|monDom2|scaffold_15 (38929275-38929597) | |
| 207-470, gnl|oryCun1|scaffold_205624 (163226-163548) | |
| 207-470, gnl|panTro1|chr14 (28204862-28205184) | |
| 207-470, gnl|rheMac2|chr17 (9075105-9075427) | |
| 207-470, gnl|rn3|chr12 (7260845-7260523) | |
| 207-470, gnl|tetNig1|chr7 (3270898-3271307) | |
| 207-470, gnl|xenTro1|scaffold_978 (218368-218046) | |
| 485-635, gnl|bosTau2|chr18 (52897025-52896875) | |
| 485-635, gnl|Hg17|chrX (69931872-69931722) | |
| 485-635, gnl|Mm7|chrUn_random (1717070-1717220) | |
| 642-851, gnl|bosTau2|chr3 (68686783-68686996) | |
| 642-851, gnl|Hg17|chr19 (58803514-58802313) | |
| 642-851, gnl|Mm7|chrUn_random (1718020-1718206) | |
| 646-825, gnl|bosTau2|chr18 (52916860-52916681) | |
| 646-825, gnl|Hg17|chrX (69931501-69931322) | |
| 646-825, gnl|Mm7|chrUn_random (1718024-1718203) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) | |
| cty (0.10408) |