Ss1.1-Thy1-THY010202H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAAGAAAAGGAGTTGCTTGATGTGAGAGTGAAATGGACGTAAGATTTTATCCACCTCCA GCCCAGCCCGCCGCTGCGCCCGACGCTCCCTGTCTGGGACCTTCTCCCTGCCTGGACCCC TACTATTGCAACAAGTTTGACGGTGAGAACATGTATATGAGCATGACAGAGCCGAGCCAG GACTATGTGCCAGCCAGCCAGTCCTATCCTGGCCCAAGCCTGGAAAGCGAAGACTTTAAC ATTCCACCTATCACTCCTCCTTCCCTCCCCGACCACTCGCTGGTGCACCTGAATGAGGTC GAACCTGGTTACCACTCTCTGTGTCACCCAATGAACCATAATGGCCTGCTACCGTTTCAT CCACAAAACATGGACCTACCTGAAATCACCGTCTCCAATATGCTGGGACAGGACGGAGCA CTGCTTCCCAACCCCATTTCTGTGATGCAAGATATACGGAACCCAGAAGGAACTCAGTAT AGCTCCCATCCTACAATGGCAACCATGAGACCAAGGGGCCAGCCTGCAGACATCAGGCAG CAGGCAGGAATGATGCAGCACGGCCAGCTGACCACCATCAACCAGTCCCAGCTAAGCGCT CAGCTGGGCTTGAACATGGCAGGAAGCAATGTCCCCCACAGCTCACCTTCTCCTCCAGGA AGCAAGTCTGCCACTCCTTCACCATCCAGTTCTGTTCACGAAGATGAAGGTGATGAGACC TCTAAGATCAATGGTGGAGAGAAGCGACCTGCCTCTGATATGGGGAAAAAACCAAAAACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAAGAAAAGGAGTTGCTTGATGTGAGAGTGAAATGGACGTAAGATTTTATCCACCTCCA GCCCAGCCCGCCGCTGCGCCCGACGCTCCCTGTCTGGGACCTTCTCCCTGCCTGGACCCC TACTATTGCAACAAGTTTGACGGTGAGAACATGTATATGAGCATGACAGAGCCGAGCCAG GACTATGTGCCAGCCAGCCAGTCCTATCCTGGCCCAAGCCTGGAAAGCGAAGACTTTAAC ATTCCACCTATCACTCCTCCTTCCCTCCCCGACCACTCGCTGGTGCACCTGAATGAGGTC GAACCTGGTTACCACTCTCTGTGTCACCCAATGAACCATAATGGCCTGCTACCGTTTCAT CCACAAAACATGGACCTACCTGAAATCACCGTCTCCAATATGCTGGGACAGGACGGAGCA CTGCTTCCCAACCCCATTTCTGTGATGCAAGATATACGGAACCCAGAAGGAACTCAGTAT AGCTCCCATCCTACAATGGCAACCATGAGACCAAGGGGCCAGCCTGCAGACATCAGGCAG CAGGCAGGAATGATGCAGCACGGCCAGCTGACCACCATCAACCAGTCCCAGCTAAGCGCT CAGCTGGGCTTGAACATGGCAGGAAGCAATGTCCCCCACAGCTCACCTTCTCCTCCAGGA AGCAAGTCTGCCACTCCTTCACCATCCAGTTCTGTTCACGAAGATGAAGGTGATGAGACC TCTAAGATCAATGGTGGAGAGAAGCGACCTGCCTCTGATATGGGGAAAAAACCAAAAACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 199-444, gnl|bosTau2|chr14 (12734623-12734868) | |
| 199-444, gnl|Hg17|chr8 (60014662-60014415) | |
| 199-444, gnl|Mm7|chr4 (6750297-6750052) | |
| 547-720, gnl|bosTau2|chr18 (22100293-22100466) | |
| 547-720, gnl|canFam2|chr2 (65956711-65956457) | |
| 547-720, gnl|danRer3|chr7 (30907451-30907197) | |
| 547-720, gnl|dasNov1|scaffold_2409 (41843-42113) | |
| 547-720, gnl|echTel1|scaffold_280871 (72826-73096) | |
| 547-720, gnl|fr1|chrUn (10324810-10325059) | |
| 547-720, gnl|galGal2|chr11 (5291594-5291338) | |
| 547-720, gnl|hg17|chr16 (51041682-51041937) | |
| 547-720, gnl|Hg17|chr16 (51041869-51041696) | |
| 547-720, gnl|loxAfr1|scaffold_4054 (75808-76032) | |
| 547-720, gnl|mm7|chr8 (88850436-88850691) | |
| 547-720, gnl|Mm7|chr8 (88850623-88850450) | |
| 547-720, gnl|monDom2|scaffold_35 (18021431-18021703) | |
| 547-720, gnl|oryCun1|scaffold_198218 (133025-132770) | |
| 547-720, gnl|panTro1|chr18 (45089503-45089758) | |
| 547-720, gnl|rheMac2|chr20 (50649081-50649336) | |
| 547-720, gnl|rn3|chr19 (17969089-17968834) | |
| 547-720, gnl|tetNig1|chr5 (509939-510188) | |
| 547-720, gnl|xenTro1|scaffold_296 (1348621-1348874) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 199-444, gnl|bosTau2|chr14 (12734623-12734868) | |
| 199-444, gnl|Hg17|chr8 (60014662-60014415) | |
| 199-444, gnl|Mm7|chr4 (6750297-6750052) | |
| 547-720, gnl|bosTau2|chr18 (22100293-22100466) | |
| 547-720, gnl|canFam2|chr2 (65956711-65956457) | |
| 547-720, gnl|danRer3|chr7 (30907451-30907197) | |
| 547-720, gnl|dasNov1|scaffold_2409 (41843-42113) | |
| 547-720, gnl|echTel1|scaffold_280871 (72826-73096) | |
| 547-720, gnl|fr1|chrUn (10324810-10325059) | |
| 547-720, gnl|galGal2|chr11 (5291594-5291338) | |
| 547-720, gnl|hg17|chr16 (51041682-51041937) | |
| 547-720, gnl|Hg17|chr16 (51041869-51041696) | |
| 547-720, gnl|loxAfr1|scaffold_4054 (75808-76032) | |
| 547-720, gnl|mm7|chr8 (88850436-88850691) | |
| 547-720, gnl|Mm7|chr8 (88850623-88850450) | |
| 547-720, gnl|monDom2|scaffold_35 (18021431-18021703) | |
| 547-720, gnl|oryCun1|scaffold_198218 (133025-132770) | |
| 547-720, gnl|panTro1|chr18 (45089503-45089758) | |
| 547-720, gnl|rheMac2|chr20 (50649081-50649336) | |
| 547-720, gnl|rn3|chr19 (17969089-17968834) | |
| 547-720, gnl|tetNig1|chr5 (509939-510188) | |
| 547-720, gnl|xenTro1|scaffold_296 (1348621-1348874) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.170503) |