Non-Coding RNA Search

Ss1.1-Thy1-THY010203A06.5

Sequence:


               
               AAGAAAAAATATGGCAAACGTTGTCTCTCTTCTTGATATGTAGGGACTTGGTTTTGGAGA
TTCTGAGTGACAAGGAAATGATGGGAGAGAGCAAGGAGGGGAGGGAAGGAAGGACTTTCA
AGGGAGATTTTTCACTTGTGGAAGCACTTTCATTTCTGGCCTTAGCTCTGTATGTCCCAG
CTTGGACTCTAGAGATAATGCAGAGAAAATTTTGCGTAACTCATTTGTAACCATAGAACT
CGCTGATTGAACCACTGGGCATGTGATGAAGTACTTGTTTTGTCCATGTTAGTTCTGAAA
TCATAAAGTAGGTCTGTAATTTAGAGTGTAATGAGAGGAACTCAGGCACATATGGTACTT
CATTAGGCTGCAATATATTTGAGTGATTTGCTGCAGAGCTCAGGACAAAATACAGCCGGG
CTGGTGACAGACATTGACACTTTGTAATAAGCATGAATAACAGGAGAAGCGTAGACATGT
ACAGTTAGCATATTCATTTATTTTGAAGTTTTATAATAATTTGAAATAAGGATTAGATGA
CTGGAAAATAGTTGGAATATGAAAGCTACTTATGTTCATCTTTTTATTTTTTATATTTTT
AAAAACAAGCATAATCAACGAATGAAAAACTGACTTAGAAGGACACGAAAGCACAGAAGT
GACTGCTTTTGACAGGAATCACTTCTCTAAAGTACATTATTCTCAATCCTCGCATGCTTC
CTTAAGATGAAGGCCCCACGAATTCATTCCAGGGTCCCTGCCCCAGGGGTTGCACAGCTG
CCTCAGCATGAAGGGGTGCTGTGAAGGCTATGGAGCCTGGAAAGATTGTGGCTGCTACCA
AAGGATTGCCCTGTAGGGAGCTGAAGGTTGCTACAGGAGAGGAGTTCTGCCTGCAAATAA
AGCGAGCTGCTTCTCCTCAAAAAAGAAAAAAAAGAAAAACAAAAGAAAAAAAAAACACCC
CAGCTCATTAGATAGATAGGCATTCCTGCTGTGGTGCACTAGGTCAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAAAAATATGGCAAACGTTGTCTCTCTTCTTGATATGTAGGGACTTGGTTTTGGAGA
TTCTGAGTGACAAGGAAATGATGGGAGAGAGCAAGGAGGGGAGGGAAGGAAGGACTTTCA
AGGGAGATTTTTCACTTGTGGAAGCACTTTCATTTCTGGCCTTAGCTCTGTATGTCCCAG
CTTGGACTCTAGAGATAATGCAGAGAAAATTTTGCGTAACTCATTTGTAACCATAGAACT
CGCTGATTGAACCACTGGGCATGTGATGAAGTACTTGTTTTGTCCATGTTAGTTCTGAAA
TCATAAAGTAGGTCTGTAATTTAGAGTGTAATGAGAGGAACTCAGGCACATATGGTACTT
CATTAGGCTGCAATATATTTGAGTGATTTGCTGCAGAGCTCAGGACAAAATACAGCCGGG
CTGGTGACAGACATTGACACTTTGTAATAAGCATGAATAACAGGAGAAGCGTAGACATGT
ACAGTTAGCATATTCATTTATTTTGAAGTTTTATAATAATTTGAAATAAGGATTAGATGA
CTGGAAAATAGTTGGAATATGAAAGCTACTTATGTTCATCTTTTTATTTTTTATATTTTT
AAAAACAAGCATAATCAACGAATGAAAAACTGACTTAGAAGGACACGAAAGCACAGAAGT
GACTGCTTTTGACAGGAATCACTTCTCTAAAGTACATTATTCTCAATCCTCGCATGCTTC
CTTAAGATGAAGGCCCCACGAATTCATTCCAGGGTCCCTGCCCCAGGGGTTGCACAGCTG
CCTCAGCATGAAGGGGTGCTGTGAAGGCTATGGAGCCTGGAAAGATTGTGGCTGCTACCA
AAGGATTGCCCTGTAGGGAGCTGAAGGTTGCTACAGGAGAGGAGTTCTGCCTGCAAATAA
AGCGAGCTGCTTCTCCTCAAAAAAGAAAAAAAAGAAAAACAAAAGAAAAAAAAAACACCC
CAGCTCATTAGATAGATAGGCATTCCTGCTGTGGTGCACTAGGTCAAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               47-615, gnl|bosTau2|chr5 (39199471-39200044)
               

               
               47-615, gnl|Hg17|chr12 (97601517-97602121)
               

               
               47-615, gnl|Mm7|chr10 (90581188-90580440)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-615, gnl|bosTau2|chr5 (39199471-39200044)
               

               
               47-615, gnl|Hg17|chr12 (97601517-97602121)
               

               
               47-615, gnl|Mm7|chr10 (90581188-90580440)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	47-615, gnl\|bosTau2\|chr5 (39199471-39200044)
	47-615, gnl\|Hg17\|chr12 (97601517-97602121)
	47-615, gnl\|Mm7\|chr10 (90581188-90580440)