Non-Coding RNA Search

Ss1.1-Thy1-THY010204C07.5

Sequence:


               
               AGATTTGCTACATTCATTTTTTAGGAAGATTTTAGGTACTGATTTTATTTCTTTAGTGGT
TTGTTTCCTGTTCTGAATCAGTTTTGTCCATTTGTGATTTTTTTACCTACTTCTCCATAC
AGAGTTTCAGATTAATAGGTATTAGAGGTATTTGTGGTATTCTTTTATACCCAAAACTGT
GTATTCTCTATTTGATCTGTGATTTAGCTGCTCTTTGCTGGTAATTTTGGCCACGCAATT
TCCTCTTATATCTAGCTCTAGGCTACAAGTCCCCACATAAGATGTAGTTCTCTGATGTGT
AGATTACCCCCAAAAATTCTTTTAGGGCCCCCACTTGATCATTAAAATTGTATTACTATA
ATGGCACTTGAATATGGATAAGCATGAAGTGAGGTATGAACTTATAACTCATTTACAGCT
CTAAAGCCAGTATAAATTTACAGATTAAGTACAGGGAAAACTTTAAAACACAGTTGCAAA
ATTGCAGCATTAAAGCCACTGTGATACTGTTTGATACTATGATACTGTTTTGCTGAAACT
AAAACACTGGTTTGGGTTCGATCTGAGGTCCAAATATATTCTGAGGTCCAGATCTTATAT
TCTGAATTTTGTTTATGTATCTTAAGTAATTCTTTTATAAAGAATACCTTCATTAAGTCG
AGATCTAATTCACTTATTTTGGAATTGTAAGAGAAATAGTATCTGAAATGAGCTTTCCGA
AATCAAATAAGTGTTTCACCATCACAATATATGTTTTATTAATAACTGATAGTACACTTG
GCATGCAGTTCCTGACTTGAGAACTTTTCCTATGGAAGCGAAACTTAAAACACATTAAAG
ATTTAAGTGATACCACTTGAAGTCATTATTTGGTACCAGCAGAAGTATCAACAAAAACTT
GGGTACTTCGGAGTTCTGGTCATGGTGCAGCAGAAATGAATCCGACTAGAAACCATGAGG
TTTCGGGTTCAATCCCTGGCCTCGCTCAGTGGGTTAAGGATCTGGCGTTGCTGTGAGCTG
TGGTGTAGGTCCCAGATGTGGCTCGGATCTGGCGTTGCTGTGGCTCTGGCATGGGCTGGC
AGCTATAGCTTCATTAGACCCCTAGCCTGGGAACCTCCATATGCCGTGGGTGCGGCCCTA
AGAAAAAGACAAAAGTCAAAAAAAAAAAAAATTTGGGTGCTTAAATCTCATGATAAAAGT
GATAAGAAGAATATACTCATGCACAATTTGTTTTCATTATCAAAATGAAAATAGGAGTTC
CCTTGTGGTGTCGTGGGTTAAGGATCTGGAGTTGTCACTGCAGTAGCTTGGGTTGCTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATTTGCTACATTCATTTTTTAGGAAGATTTTAGGTACTGATTTTATTTCTTTAGTGGT
TTGTTTCCTGTTCTGAATCAGTTTTGTCCATTTGTGATTTTTTTACCTACTTCTCCATAC
AGAGTTTCAGATTAATAGGTATTAGAGGTATTTGTGGTATTCTTTTATACCCAAAACTGT
GTATTCTCTATTTGATCTGTGATTTAGCTGCTCTTTGCTGGTAATTTTGGCCACGCAATT
TCCTCTTATATCTAGCTCTAGGCTACAAGTCCCCACATAAGATGTAGTTCTCTGATGTGT
AGATTACCCCCAAAAATTCTTTTAGGGCCCCCACTTGATCATTAAAATTGTATTACTATA
ATGGCACTTGAATATGGATAAGCATGAAGTGAGGTATGAACTTATAACTCATTTACAGCT
CTAAAGCCAGTATAAATTTACAGATTAAGTACAGGGAAAACTTTAAAACACAGTTGCAAA
ATTGCAGCATTAAAGCCACTGTGATACTGTTTGATACTATGATACTGTTTTGCTGAAACT
AAAACACTGGTTTGGGTTCGATCTGAGGTCCAAATATATTCTGAGGTCCAGATCTTATAT
TCTGAATTTTGTTTATGTATCTTAAGTAATTCTTTTATAAAGAATACCTTCATTAAGTCG
AGATCTAATTCACTTATTTTGGAATTGTAAGAGAAATAGTATCTGAAATGAGCTTTCCGA
AATCAAATAAGTGTTTCACCATCACAATATATGTTTTATTAATAACTGATAGTACACTTG
GCATGCAGTTCCTGACTTGAGAACTTTTCCTATGGAAGCGAAACTTAAAACACATTAAAG
ATTTAAGTGATACCACTTGAAGTCATTATTTGGTACCAGCAGAAGTATCAACAAAAACTT
GGGTACTTCGGAGTTCTGGTCATGGTGCAGCAGAAATGAATCCGACTAGAAACCATGAGG
TTTCGGGTTCAATCCCTGGCCTCGCTCAGTGGGTTAAGGATCTGGCGTTGCTGTGAGCTG
TGGTGTAGGTCCCAGATGTGGCTCGGATCTGGCGTTGCTGTGGCTCTGGCATGGGCTGGC
AGCTATAGCTTCATTAGACCCCTAGCCTGGGAACCTCCATATGCCGTGGGTGCGGCCCTA
AGAAAAAGACAAAAGTCAAAAAAAAAAAAAATTTGGGTGCTTAAATCTCATGATAAAAGT
GATAAGAAGAATATACTCATGCACAATTTGTTTTCATTATCAAAATGAAAATAGGAGTTC
CCTTGTGGTGTCGTGGGTTAAGGATCTGGAGTTGTCACTGCAGTAGCTTGGGTTGCTGTG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               91-908, gnl|bosTau2|chr3 (39336556-39335761)
               

               
               91-908, gnl|Hg17|chr1 (94690770-94691593)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               91-908, gnl|bosTau2|chr3 (39336556-39335761)
               

               
               91-908, gnl|Hg17|chr1 (94690770-94691593)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	91-908, gnl\|bosTau2\|chr3 (39336556-39335761)
	91-908, gnl\|Hg17\|chr1 (94690770-94691593)