Non-Coding RNA Search

Ss1.1-Thy1-THY010204H07.5

Sequence:


               
               ATAATTTTAAAAAAGGAATTTGGTTGTTCTTTTTTTTGTTGTTTTAGGGCTGCACCCGCG
GCAAATGGAGATTCCCAGGCTAGGGGTCAATCGGAGCCGTAGCCACCAGCCTACGCCAGA
GTCACAGCAACGCAGGATCTGAGCTGCATCTGCAACCTACACCACAGCTCACAGCAAGGC
CGGATCCTTAACCCACTGAGCAAGGCCAGGGATCAAACCCACAATCTCGTGGTTCCTGGT
CGGATTCCTTTCTGCCGCGCCAAGTCGGAAACTCTGGGATTCTTTTTTTTTTATTTTAAA
ATTTTATTCATTTGTTTTTGGCCTTACTTGTGGAAGTTCTTGGGCCAGGAACTGAACCCA
GGCCACAGCAGTAACCAGTGCCACAGCAGTGACAATGCCAAATCCTTAACCCCATGAGTC
ATCAGGGAACTCATATAATGGAATTAATTTTTATAATGTTACAAATCACAAGGGCTCAAT
GTGTCAGTTTAAATACCGAATTCAAAGTCTATGGATAACTTAAAGAAATTAGGTGAATAA
TTGAGTAAATAAATGCCTAATCTTTGCATACCTGAACACTTTCTAAATTGAAGGGTACAA
AATACCTACCAGTAACAATCATTAGATCTATGCAAGTCTTTTATTTTGTACACAGTTAAG
AATGACCATAGAGTAACAGGTTAGAAAATACGTAGATGCCTGAGGAAAAGGGAAATAGAT
ATGCTTGTTTTTGATTAAATTCGTTAAAGGGAAATGTCAATTGTACATGTCGTCCCAGAG
GACCAGTCAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAATTTTAAAAAAGGAATTTGGTTGTTCTTTTTTTTGTTGTTTTAGGGCTGCACCCGCG
GCAAATGGAGATTCCCAGGCTAGGGGTCAATCGGAGCCGTAGCCACCAGCCTACGCCAGA
GTCACAGCAACGCAGGATCTGAGCTGCATCTGCAACCTACACCACAGCTCACAGCAAGGC
CGGATCCTTAACCCACTGAGCAAGGCCAGGGATCAAACCCACAATCTCGTGGTTCCTGGT
CGGATTCCTTTCTGCCGCGCCAAGTCGGAAACTCTGGGATTCTTTTTTTTTTATTTTAAA
ATTTTATTCATTTGTTTTTGGCCTTACTTGTGGAAGTTCTTGGGCCAGGAACTGAACCCA
GGCCACAGCAGTAACCAGTGCCACAGCAGTGACAATGCCAAATCCTTAACCCCATGAGTC
ATCAGGGAACTCATATAATGGAATTAATTTTTATAATGTTACAAATCACAAGGGCTCAAT
GTGTCAGTTTAAATACCGAATTCAAAGTCTATGGATAACTTAAAGAAATTAGGTGAATAA
TTGAGTAAATAAATGCCTAATCTTTGCATACCTGAACACTTTCTAAATTGAAGGGTACAA
AATACCTACCAGTAACAATCATTAGATCTATGCAAGTCTTTTATTTTGTACACAGTTAAG
AATGACCATAGAGTAACAGGTTAGAAAATACGTAGATGCCTGAGGAAAAGGGAAATAGAT
ATGCTTGTTTTTGATTAAATTCGTTAAAGGGAAATGTCAATTGTACATGTCGTCCCAGAG
GACCAGTCAGGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               429-792, gnl|bosTau2|chr23 (24226748-24227115)
               

               
               429-792, gnl|Hg17|chr6 (26227757-26227401)
               

               
               429-792, gnl|Mm7|chr13 (23052795-23053160)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               429-792, gnl|bosTau2|chr23 (24226748-24227115)
               

               
               429-792, gnl|Hg17|chr6 (26227757-26227401)
               

               
               429-792, gnl|Mm7|chr13 (23052795-23053160)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nep (0.183925)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	429-792, gnl\|bosTau2\|chr23 (24226748-24227115)
	429-792, gnl\|Hg17\|chr6 (26227757-26227401)
	429-792, gnl\|Mm7\|chr13 (23052795-23053160)