Ss1.1-Thy1-THY010205F12.5
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CCACCTTGGTACCAGTATGATGCCCCCTGGCTCTTTTATCAGGATGCAGAGTACCTTTTT
CATACCTCTGCCTCAGAATGGTCCTCTTTTGAGTTTGTCTGTGGCTGGCTGCGCAGTGAT
ATTCTCACTATTCATTCTGCACATGAGCAAGAATTCATCCACAGCAAAATAAGAGCGGTA
CTTACATAAGATTCACTATGAGAAATTCAGAGCTTAGCTCCTTCTTCTGTCCTTGTGGGA
TTTTGTTTTTATATGACTTCAGACATTTATTTAAGTCTCCTTAAAAGCCCGAGATTTTTA
AGAATTGTTTTTCTTCCTTATCTTGGGAGGTGCTCAGGTCCTGTGCTGGCAAGTATTCAA
TATACACACTGATCCGGAAGACAGGGGCCTGCTTCGCGTTGGGTGAGCCGTCTGGCCACG
CAGGTAACCGCGGGCGCGTCCGCCCTCCGGCCCGCTAGGGGCCTCGACGCTGTCACGTCG
GCCGACTTTCCTCGGTTCGGGTTAGGGCTGCGTTCTGGGGTCATGTCACCTTTGCTTTGC
TCTGGGGTCTGGAATGGGACAAGTGAGCTGAAGAGTGGTCTGAGAAGAAGGCGCTCCATT
GCCCTCGGGGTTCCGGGAGGAGGGCGAGAGGGGCGTTGGGAGGGCAGGGCGCTTCCAGTG
TTGAGGCGAGGAGTCCGCCAGAGGGAAGGCAACCAGACTCTTTTCTGGACAAGTCCTGGA
GTCCTTCTTCGTCCTGTCTCCTCTAGAATCACACTTCCCTGGAGTATAGGGTTCTTCAAC
ACCTCTCCCCCAACTCCCCACGCCTCATCCAGGCCATCTCGCCCCTCCTTCGCTCCTTGG
TCACCTTGGCCCTTACTGTCAAGAGGAACTTTCTGCCACAGCTTCAAGAATAACTAAAGA
TTCCCTGACTTCACTGTGCCTGTGGTGCACGTCAAAAAGCCATGTCTCCTACAGTGACCA
TGGCCGTGACTGTTATGATGCCCTCCCCCAATGCCTCAGGCAGAGCCCTTTCTTCTAATT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCACCTTGGTACCAGTATGATGCCCCCTGGCTCTTTTATCAGGATGCAGAGTACCTTTTT
CATACCTCTGCCTCAGAATGGTCCTCTTTTGAGTTTGTCTGTGGCTGGCTGCGCAGTGAT
ATTCTCACTATTCATTCTGCACATGAGCAAGAATTCATCCACAGCAAAATAAGAGCGGTA
CTTACATAAGATTCACTATGAGAAATTCAGAGCTTAGCTCCTTCTTCTGTCCTTGTGGGA
TTTTGTTTTTATATGACTTCAGACATTTATTTAAGTCTCCTTAAAAGCCCGAGATTTTTA
AGAATTGTTTTTCTTCCTTATCTTGGGAGGTGCTCAGGTCCTGTGCTGGCAAGTATTCAA
TATACACACTGATCCGGAAGACAGGGGCCTGCTTCGCGTTGGGTGAGCCGTCTGGCCACG
CAGGTAACCGCGGGCGCGTCCGCCCTCCGGCCCGCTAGGGGCCTCGACGCTGTCACGTCG
GCCGACTTTCCTCGGTTCGGGTTAGGGCTGCGTTCTGGGGTCATGTCACCTTTGCTTTGC
TCTGGGGTCTGGAATGGGACAAGTGAGCTGAAGAGTGGTCTGAGAAGAAGGCGCTCCATT
GCCCTCGGGGTTCCGGGAGGAGGGCGAGAGGGGCGTTGGGAGGGCAGGGCGCTTCCAGTG
TTGAGGCGAGGAGTCCGCCAGAGGGAAGGCAACCAGACTCTTTTCTGGACAAGTCCTGGA
GTCCTTCTTCGTCCTGTCTCCTCTAGAATCACACTTCCCTGGAGTATAGGGTTCTTCAAC
ACCTCTCCCCCAACTCCCCACGCCTCATCCAGGCCATCTCGCCCCTCCTTCGCTCCTTGG
TCACCTTGGCCCTTACTGTCAAGAGGAACTTTCTGCCACAGCTTCAAGAATAACTAAAGA
TTCCCTGACTTCACTGTGCCTGTGGTGCACGTCAAAAAGCCATGTCTCCTACAGTGACCA
TGGCCGTGACTGTTATGATGCCCTCCCCCAATGCCTCAGGCAGAGCCCTTTCTTCTAATT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
19-318, gnl|bosTau2|chr2 (26047885-26047591) |
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19-318, gnl|canFam2|chr36 (8732919-8733365) |
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19-318, gnl|dasNov1|scaffold_46172 (429-4) |
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19-318, gnl|echTel1|scaffold_194611 (662-219) |
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19-318, gnl|hg17|chr2 (160657826-160658276) |
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19-318, gnl|Hg17|chr2 (160658244-160657920) |
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19-318, gnl|loxAfr1|scaffold_404 (32245-31787) |
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19-318, gnl|mm7|chr2 (60377697-60378126) |
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19-318, gnl|Mm7|chr2 (60378090-60377784) |
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19-318, gnl|monDom2|scaffold_2 (54052319-54052744) |
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19-318, gnl|oryCun1|scaffold_205254 (128427-127994) |
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19-318, gnl|panTro1|chr13 (50033802-50034258) |
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19-318, gnl|rheMac2|chr12 (23518799-23519253) |
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19-318, gnl|rn3|chr3 (42045674-42046110) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
19-318, gnl|bosTau2|chr2 (26047885-26047591) |
|
19-318, gnl|canFam2|chr36 (8732919-8733365) |
|
19-318, gnl|dasNov1|scaffold_46172 (429-4) |
|
19-318, gnl|echTel1|scaffold_194611 (662-219) |
|
19-318, gnl|hg17|chr2 (160657826-160658276) |
|
19-318, gnl|Hg17|chr2 (160658244-160657920) |
|
19-318, gnl|loxAfr1|scaffold_404 (32245-31787) |
|
19-318, gnl|mm7|chr2 (60377697-60378126) |
|
19-318, gnl|Mm7|chr2 (60378090-60377784) |
|
19-318, gnl|monDom2|scaffold_2 (54052319-54052744) |
|
19-318, gnl|oryCun1|scaffold_205254 (128427-127994) |
|
19-318, gnl|panTro1|chr13 (50033802-50034258) |
|
19-318, gnl|rheMac2|chr12 (23518799-23519253) |
|
19-318, gnl|rn3|chr3 (42045674-42046110) |
