Non-Coding RNA Search

Ss1.1-Thy1-THY010207E04.5

Sequence:


               
               TGTCTTCGGGCATGAGCTGCTGCTCCTCTTCCTCACTCCTGTAGGAGGTACACGGTTGGA
GCCTCATCTCCGGGCTTCGTTCTGATTCGTTTTTCACTCTGATAAAATGATCCAGGCAGC
AGCAGAGACCGCCTATGACATGGTGTCTCCTGGTACCCTTGCCATCGAGCCCAAGAAGGT
CAGAAGGTTCCCTCATCACCGGCTAGCCCACCAGCCAGTGGACCTGAGGGAAGGCGTGGC
CAAGGCCTACAGCGTGGTGAAGGAGGGACTCACAGACACGGCTCAGACCATTTACGAAAC
CGCAGCTCGGGAACACGAGAGCAGAGGGGTCACGGGCGCCGTGGGCGAGGTCCTGCGCCA
GATCCCTCCGGCGGTGGTGAAGCCTCTGATTGTTGCCACGGAAGCCACCTCGAACGTCTT
GGGCGGCATGAGAAACCAGATGAGACCAGATGTTCGGCAAGACGAATCCCAGAAGTGGCG
CCACGGGGAAGACTGACATTTTGGAAGGGGTTCTTGGAGACGCTGACGAGGCTGGAAATA
AGGAGCATGGTGTCCCACTGGCAGCTTTGGAGGCAACTCATTTACTTTTATTGTGCTCAT
CTCAGGAACAAAACCATTTCATAGTTACATGATTTAGTATCAAAACAACATGCAGCCAGA
ACCCCTTTGACATTTTAGGGCTAGTGTGGTACTTGCCTGTAGAAGTGTTTGGTGGCTGGT
GTCCAAAGTCTGTCAAGCATTTTGCTGCCGAGTTAGTGGAGTGCTTGCTTTTTGTTAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCTTCGGGCATGAGCTGCTGCTCCTCTTCCTCACTCCTGTAGGAGGTACACGGTTGGA
GCCTCATCTCCGGGCTTCGTTCTGATTCGTTTTTCACTCTGATAAAATGATCCAGGCAGC
AGCAGAGACCGCCTATGACATGGTGTCTCCTGGTACCCTTGCCATCGAGCCCAAGAAGGT
CAGAAGGTTCCCTCATCACCGGCTAGCCCACCAGCCAGTGGACCTGAGGGAAGGCGTGGC
CAAGGCCTACAGCGTGGTGAAGGAGGGACTCACAGACACGGCTCAGACCATTTACGAAAC
CGCAGCTCGGGAACACGAGAGCAGAGGGGTCACGGGCGCCGTGGGCGAGGTCCTGCGCCA
GATCCCTCCGGCGGTGGTGAAGCCTCTGATTGTTGCCACGGAAGCCACCTCGAACGTCTT
GGGCGGCATGAGAAACCAGATGAGACCAGATGTTCGGCAAGACGAATCCCAGAAGTGGCG
CCACGGGGAAGACTGACATTTTGGAAGGGGTTCTTGGAGACGCTGACGAGGCTGGAAATA
AGGAGCATGGTGTCCCACTGGCAGCTTTGGAGGCAACTCATTTACTTTTATTGTGCTCAT
CTCAGGAACAAAACCATTTCATAGTTACATGATTTAGTATCAAAACAACATGCAGCCAGA
ACCCCTTTGACATTTTAGGGCTAGTGTGGTACTTGCCTGTAGAAGTGTTTGGTGGCTGGT
GTCCAAAGTCTGTCAAGCATTTTGCTGCCGAGTTAGTGGAGTGCTTGCTTTTTGTTAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|60360502|dbj|BAD90495.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|60360502|dbj|BAD90495.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               264-779, gnl|bosTau2|chr21 (42604165-42603657)
               

               
               264-779, gnl|Hg17|chr14 (95822077-95821574)
               

               
               264-779, gnl|Mm7|chr12 (103114965-103114479)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               264-779, gnl|bosTau2|chr21 (42604165-42603657)
               

               
               264-779, gnl|Hg17|chr14 (95822077-95821574)
               

               
               264-779, gnl|Mm7|chr12 (103114965-103114479)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hea (0.204499)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)

	264-779, gnl\|bosTau2\|chr21 (42604165-42603657)
	264-779, gnl\|Hg17\|chr14 (95822077-95821574)
	264-779, gnl\|Mm7\|chr12 (103114965-103114479)