Ss1.1-Tra1-TCH01A030010.5
|
CTGGGCTCATGAAAGCAGAGTTCTTCGAAGATGTAGTTCCAGCGGTCAGGAAGTGGAGAG
AGGCTGGCATGAAGGTGTATGTCTATTCCTCGGGGAGTGTGGAGGCCCAGAAGCTCTTAT
TCGGGCATTCTACGGAGGGAGATGTTCTCGAGCTTTTTGACGGTCACTTTGATACCAAGA
TTGGACACAAAGTGGAGAGTGAGAGTTACCGAAAGATTGCCAGCAGCATCGGGTGCTCAA
CCAGCAACATCTTGTTTCTAACGGACGTCACCGTAGAGGCCAGTGCTGCTGAGGCGGCCG
ACGTGCACGTGGCCGTGGTGGTGAGACCGGGCAACGCGGGGCTCACGGACGACGAGAAGA
CTTACTACCGCCTCATCACGTCCTTCGGCGAGCTGTGCCTGCCGGCCTCCCCCTAGAGCA
GGGGCGCCAGGAAGGCCGGCTGTCCTCCCCGAGTGCTCCCTCTGCCGGCTTTCATCCTAA
CGGGAGAAGGAATTCACTTGAAAATACGTATATACACACGTGAGTTCTGTAAGTGTGCAT
ATGTGTATTTTCAAAATCCCTTTCACAGGCACCTAAGTAGAAGACAGAATCTCAGTTCAG
TGAAAAGGAAACTCATGTAAAGATGTTTTATAGGCGGAAATTGTTTTGAAACCAGAACGC
CAACCCTTACTGAGGGCAAAATATCGTTGCTAGAAGAAATTACTACTATACAGATCAAAT
GTGTTATGTTTATCAAGTCATGTACCAAAATGGAAAGGTCGCTTTAAGAAGGTGCTTCGA
AACTGTTATTTTAAGAACTAAAAGTATTTCAAAGACATTCCTAATGATAATTTATCCACC
TTTTTAATTGTGAGTTAGAAGACTCTAACAGCTGAATTTCAAAATGTTAACCTCCACGGA
GACAAACCACAAAGCTCTTAGTTTCTGTTCCAAAAGAGAGCAGTCGGGGAAGGAAACTCC
TTTGAGTCTTGATCGAGTATCTGGGATTTAAGAAACTTGCTAATGACGGTGGCGCCCACG
GCAAGCAGTTGCCTTACCAGTGAAAACGTTGCACTAGGGAGTTCCAGTTGTGGCTCAGTG
GTTAACGAATCCGACTAGGAACCATGAGGTTGCAGGTTCGATCCCTGGCCTTGCTCAGTG
GGTTAAGGATCCGGCGTTGCCGTGAGCTGTGGTGTAGCCGGCAGACGCAGCTCGGATCCC
ACATTGCTGTGGCTGTGGTGTAGGCCGGTGGCTACAGCTGCGATTCGCCCCCTAGCCTGG
GAACCTCCGTATGCCGCAGGTATGGTACCCCCCTAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGGGCTCATGAAAGCAGAGTTCTTCGAAGATGTAGTTCCAGCGGTCAGGAAGTGGAGAG
AGGCTGGCATGAAGGTGTATGTCTATTCCTCGGGGAGTGTGGAGGCCCAGAAGCTCTTAT
TCGGGCATTCTACGGAGGGAGATGTTCTCGAGCTTTTTGACGGTCACTTTGATACCAAGA
TTGGACACAAAGTGGAGAGTGAGAGTTACCGAAAGATTGCCAGCAGCATCGGGTGCTCAA
CCAGCAACATCTTGTTTCTAACGGACGTCACCGTAGAGGCCAGTGCTGCTGAGGCGGCCG
ACGTGCACGTGGCCGTGGTGGTGAGACCGGGCAACGCGGGGCTCACGGACGACGAGAAGA
CTTACTACCGCCTCATCACGTCCTTCGGCGAGCTGTGCCTGCCGGCCTCCCCCTAGAGCA
GGGGCGCCAGGAAGGCCGGCTGTCCTCCCCGAGTGCTCCCTCTGCCGGCTTTCATCCTAA
CGGGAGAAGGAATTCACTTGAAAATACGTATATACACACGTGAGTTCTGTAAGTGTGCAT
ATGTGTATTTTCAAAATCCCTTTCACAGGCACCTAAGTAGAAGACAGAATCTCAGTTCAG
TGAAAAGGAAACTCATGTAAAGATGTTTTATAGGCGGAAATTGTTTTGAAACCAGAACGC
CAACCCTTACTGAGGGCAAAATATCGTTGCTAGAAGAAATTACTACTATACAGATCAAAT
GTGTTATGTTTATCAAGTCATGTACCAAAATGGAAAGGTCGCTTTAAGAAGGTGCTTCGA
AACTGTTATTTTAAGAACTAAAAGTATTTCAAAGACATTCCTAATGATAATTTATCCACC
TTTTTAATTGTGAGTTAGAAGACTCTAACAGCTGAATTTCAAAATGTTAACCTCCACGGA
GACAAACCACAAAGCTCTTAGTTTCTGTTCCAAAAGAGAGCAGTCGGGGAAGGAAACTCC
TTTGAGTCTTGATCGAGTATCTGGGATTTAAGAAACTTGCTAATGACGGTGGCGCCCACG
GCAAGCAGTTGCCTTACCAGTGAAAACGTTGCACTAGGGAGTTCCAGTTGTGGCTCAGTG
GTTAACGAATCCGACTAGGAACCATGAGGTTGCAGGTTCGATCCCTGGCCTTGCTCAGTG
GGTTAAGGATCCGGCGTTGCCGTGAGCTGTGGTGTAGCCGGCAGACGCAGCTCGGATCCC
ACATTGCTGTGGCTGTGGTGTAGGCCGGTGGCTACAGCTGCGATTCGCCCCCTAGCCTGG
GAACCTCCGTATGCCGCAGGTATGGTACCCCCCTAG
|
|
151-268, gnl|bosTau2|chr6 (54005314-54005197) |
|
151-268, gnl|canFam2|chr32 (9407979-9408139) |
|
151-268, gnl|danRer3|chrNA (31779063-31779201) |
|
151-268, gnl|dasNov1|scaffold_40464 (7574-7697) |
|
151-268, gnl|echTel1|scaffold_172685 (3835-4000) |
|
151-268, gnl|fr1|chrUn (35956552-35956706) |
|
151-268, gnl|galGal2|chr4 (46986204-46986045) |
|
151-268, gnl|hg17|chr4 (83735221-83735382) |
|
151-268, gnl|Hg17|chr4 (83735245-83735362) |
|
151-268, gnl|loxAfr1|scaffold_40418 (6969-7136) |
|
151-268, gnl|mm7|chr5 (99278514-99278671) |
|
151-268, gnl|Mm7|chr5 (99278538-99278655) |
|
151-268, gnl|monDom2|scaffold_132 (2179232-2179381) |
|
151-268, gnl|oryCun1|scaffold_181281 (12060-11899) |
|
151-268, gnl|panTro1|chr3 (49972085-49971924) |
|
151-268, gnl|rheMac2|chr5 (47139144-47138983) |
|
151-268, gnl|rn3|chr14 (10838154-10837994) |
|
151-268, gnl|xenTro1|scaffold_867 (483869-484025) |
| |
|
272-1056, gnl|bosTau2|chr6 (54001819-54001030) |
|
272-1056, gnl|Hg17|chr4 (83738308-83739099) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
151-268, gnl|bosTau2|chr6 (54005314-54005197) |
|
151-268, gnl|canFam2|chr32 (9407979-9408139) |
|
151-268, gnl|danRer3|chrNA (31779063-31779201) |
|
151-268, gnl|dasNov1|scaffold_40464 (7574-7697) |
|
151-268, gnl|echTel1|scaffold_172685 (3835-4000) |
|
151-268, gnl|fr1|chrUn (35956552-35956706) |
|
151-268, gnl|galGal2|chr4 (46986204-46986045) |
|
151-268, gnl|hg17|chr4 (83735221-83735382) |
|
151-268, gnl|Hg17|chr4 (83735245-83735362) |
|
151-268, gnl|loxAfr1|scaffold_40418 (6969-7136) |
|
151-268, gnl|mm7|chr5 (99278514-99278671) |
|
151-268, gnl|Mm7|chr5 (99278538-99278655) |
|
151-268, gnl|monDom2|scaffold_132 (2179232-2179381) |
|
151-268, gnl|oryCun1|scaffold_181281 (12060-11899) |
|
151-268, gnl|panTro1|chr3 (49972085-49971924) |
|
151-268, gnl|rheMac2|chr5 (47139144-47138983) |
|
151-268, gnl|rn3|chr14 (10838154-10837994) |
|
151-268, gnl|xenTro1|scaffold_867 (483869-484025) |
| |
|
272-1056, gnl|bosTau2|chr6 (54001819-54001030) |
|
272-1056, gnl|Hg17|chr4 (83738308-83739099) |
|
fbs (0.350693) |
|
ton (0.1755) |
|
eli (0.151814) |
|
lun (0.150489) |
|
spl (0.143184) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
ute (0.132784) |
|
cov (0.132153) |
|
clu (0.119646) |
|
pgl (0.118483) |
|
ecc (0.115035) |
|
fbs (0.350693) |
|
ton (0.1755) |
|
eli (0.151814) |
|
lun (0.150489) |
|
spl (0.143184) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
ute (0.132784) |
|
cov (0.132153) |
|
clu (0.119646) |
|
pgl (0.118483) |
|
ecc (0.115035) |
