Non-Coding RNA Search

Ss1.1-Tra1-TCH01A040044.5

Sequence:


               
               GTCGAGCTGCCTGGGTTTGAATCCTGGCTTTGAGACTTACTGGCTATTGCCATGGGCAGC
TTCCTTTGGGGTTTCTCAGTCATTCTATCTGTAAAATGAGGGTAACACCAGACCTTGCCT
CACTGGGTTGTTGTGACAGTTCACTGTCTTAACACTATATGTGGCTTTGCCCAGGGCCTG
GCACCCAGGGGTGTGGTTGAGAGCAGCAGCTGCCCTGAGTGGGATGAGGCCAGTGAGCTG
AAGCTGAGCTGCCTCAGGGGGTTTTGTTTCTCCCTCTAGCCCTGGGTTTTCTGCCCTGAG
GGGAGGCAGCCAAGTATGGCTTGGGCATTTGACCCACGTGTCAAGGGTTTATTTCCTGGC
AGGCGCTTGGCTGGGAGTCCAGTTGCTGGTCTGCCCACTTGAGTGTCTAAACAAAGGCTC
TTTCAAGCCCTGGGCCCATGCCGCCTGCTGCCTCAGGCCTGGCCTGTTTCCCTGGAGGGC
AAAGGCTGCTCACATCCGTAATGACTGCTCACACGCCCCTCTGGAAGGGGTGAAAGTTCT
TGATGTGAAACCAGATTTCCTTGTGCTGGGACATCTAGGGCCCTCAGTGGACAAACTTAT
GGTGTGTTGTCGAGTTCTAAGGCTGGCTGAGGGCTAGCATCTCCACTGCTTCCAATCCCT
TTCTGTATTCATTTCCTGGGGCTGTCGTAACAAGGCACCACAAGCCGGGTGGCTTAAAAC
AATAGAAATATATTTTCTCACAGT------------------------------------
ACAGTTGGCAGGGCCAGGCTCTCTCTGAAGGTTCTGGGAAGTTGAGGGAAATCCTTCCTT
ACCTCTCCCAGCTTCTGGTTGTGGCCGGCAATCTTTGACATACCCTTGGTTTAAACCTAT
TTCAAACTCACAGACCTAGAGGACAGACTTGTGGTTGCCAAGGAGGAGGGAGGAGGGAGT
GGGATGGACTGGGAGTTTGGGGTTAGTAGATGCAAACTATTACATTTAGAATAGACGGCA
ATGAGGTCCTACTGTATAGCGTGGGGAACTATATCCATACTCTTGGGATAGAACATGATG
GAAGATAGTAAGAAAAAAAGAATATATATATGGTATATGTATATTCTTAATTTTAAACAT
TTTAAACAGTGAAAACGCCATCAAAAAAGCACAAAAAATGTGGGAAATGTGACACTTAGA
CCACAAAAAAAGCACTTGTTTATAGTATGAGTGCTAAACAAGACAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCGAGCTGCCTGGGTTTGAATCCTGGCTTTGAGACTTACTGGCTATTGCCATGGGCAGC
TTCCTTTGGGGTTTCTCAGTCATTCTATCTGTAAAATGAGGGTAACACCAGACCTTGCCT
CACTGGGTTGTTGTGACAGTTCACTGTCTTAACACTATATGTGGCTTTGCCCAGGGCCTG
GCACCCAGGGGTGTGGTTGAGAGCAGCAGCTGCCCTGAGTGGGATGAGGCCAGTGAGCTG
AAGCTGAGCTGCCTCAGGGGGTTTTGTTTCTCCCTCTAGCCCTGGGTTTTCTGCCCTGAG
GGGAGGCAGCCAAGTATGGCTTGGGCATTTGACCCACGTGTCAAGGGTTTATTTCCTGGC
AGGCGCTTGGCTGGGAGTCCAGTTGCTGGTCTGCCCACTTGAGTGTCTAAACAAAGGCTC
TTTCAAGCCCTGGGCCCATGCCGCCTGCTGCCTCAGGCCTGGCCTGTTTCCCTGGAGGGC
AAAGGCTGCTCACATCCGTAATGACTGCTCACACGCCCCTCTGGAAGGGGTGAAAGTTCT
TGATGTGAAACCAGATTTCCTTGTGCTGGGACATCTAGGGCCCTCAGTGGACAAACTTAT
GGTGTGTTGTCGAGTTCTAAGGCTGGCTGAGGGCTAGCATCTCCACTGCTTCCAATCCCT
TTCTGTATTCATTTCCTGGGGCTGTCGTAACAAGGCACCACAAGCCGGGTGGCTTAAAAC
AATAGAAATATATTTTCTCACAGT------------------------------------
ACAGTTGGCAGGGCCAGGCTCTCTCTGAAGGTTCTGGGAAGTTGAGGGAAATCCTTCCTT
ACCTCTCCCAGCTTCTGGTTGTGGCCGGCAATCTTTGACATACCCTTGGTTTAAACCTAT
TTCAAACTCACAGACCTAGAGGACAGACTTGTGGTTGCCAAGGAGGAGGGAGGAGGGAGT
GGGATGGACTGGGAGTTTGGGGTTAGTAGATGCAAACTATTACATTTAGAATAGACGGCA
ATGAGGTCCTACTGTATAGCGTGGGGAACTATATCCATACTCTTGGGATAGAACATGATG
GAAGATAGTAAGAAAAAAAGAATATATATATGGTATATGTATATTCTTAATTTTAAACAT
TTTAAACAGTGAAAACGCCATCAAAAAAGCACAAAAAATGTGGGAAATGTGACACTTAGA
CCACAAAAAAAGCACTTGTTTATAGTATGAGTGCTAAACAAGACAACA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               846-1081, gnl|bosTau2|chr13 (41806861-41806625)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               846-1081, gnl|bosTau2|chr13 (41806861-41806625)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)